Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
RFFLQ8WZ73 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
RFFLQ8WZ73 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.12■■■■□ 3.21
RFFLQ8WZ73 AL356512.1-201ENST00000607453 1739 ntBASIC35■■■■□ 3.19
RFFLQ8WZ73 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.96■■■■□ 3.19
RFFLQ8WZ73 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.77■■■■□ 3.16
RFFLQ8WZ73 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.61■■■■□ 3.13
RFFLQ8WZ73 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.55■■■■□ 3.12
RFFLQ8WZ73 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
RFFLQ8WZ73 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.23■■■■□ 3.07
RFFLQ8WZ73 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
RFFLQ8WZ73 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.97■■■■□ 3.03
RFFLQ8WZ73 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
RFFLQ8WZ73 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.64■■■□□ 2.98
RFFLQ8WZ73 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.56■■■□□ 2.96
RFFLQ8WZ73 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
RFFLQ8WZ73 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
RFFLQ8WZ73 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
RFFLQ8WZ73 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.29■■■□□ 2.92
RFFLQ8WZ73 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
RFFLQ8WZ73 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.22■■■□□ 2.91
RFFLQ8WZ73 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
RFFLQ8WZ73 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
RFFLQ8WZ73 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.95■■■□□ 2.87
RFFLQ8WZ73 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
RFFLQ8WZ73 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
RFFLQ8WZ73 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
RFFLQ8WZ73 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.77■■■□□ 2.84
RFFLQ8WZ73 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.68■■■□□ 2.82
RFFLQ8WZ73 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
RFFLQ8WZ73 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.58■■■□□ 2.81
RFFLQ8WZ73 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
RFFLQ8WZ73 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.54■■■□□ 2.8
RFFLQ8WZ73 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
RFFLQ8WZ73 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.5■■■□□ 2.79
RFFLQ8WZ73 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
RFFLQ8WZ73 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.37■■■□□ 2.77
RFFLQ8WZ73 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
RFFLQ8WZ73 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RFFLQ8WZ73 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.22■■■□□ 2.75
RFFLQ8WZ73 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.11■■■□□ 2.73
RFFLQ8WZ73 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
RFFLQ8WZ73 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
RFFLQ8WZ73 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
RFFLQ8WZ73 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
RFFLQ8WZ73 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RFFLQ8WZ73 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RFFLQ8WZ73 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.68
RFFLQ8WZ73 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.76■■■□□ 2.67
RFFLQ8WZ73 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.75■■■□□ 2.67
RFFLQ8WZ73 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.73■■■□□ 2.67
RFFLQ8WZ73 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.73■■■□□ 2.67
RFFLQ8WZ73 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RFFLQ8WZ73 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
RFFLQ8WZ73 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.61■■■□□ 2.65
RFFLQ8WZ73 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RFFLQ8WZ73 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RFFLQ8WZ73 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
RFFLQ8WZ73 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RFFLQ8WZ73 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
RFFLQ8WZ73 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
RFFLQ8WZ73 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RFFLQ8WZ73 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
RFFLQ8WZ73 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RFFLQ8WZ73 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
RFFLQ8WZ73 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
RFFLQ8WZ73 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RFFLQ8WZ73 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.18■■■□□ 2.58
RFFLQ8WZ73 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RFFLQ8WZ73 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RFFLQ8WZ73 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
RFFLQ8WZ73 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RFFLQ8WZ73 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RFFLQ8WZ73 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RFFLQ8WZ73 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RFFLQ8WZ73 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RFFLQ8WZ73 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RFFLQ8WZ73 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RFFLQ8WZ73 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RFFLQ8WZ73 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
RFFLQ8WZ73 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
RFFLQ8WZ73 AC145285.7-201ENST00000614819 1539 ntBASIC30.86■■■□□ 2.53
RFFLQ8WZ73 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
RFFLQ8WZ73 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
RFFLQ8WZ73 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.83■■■□□ 2.53
RFFLQ8WZ73 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
RFFLQ8WZ73 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RFFLQ8WZ73 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.81■■■□□ 2.52
RFFLQ8WZ73 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RFFLQ8WZ73 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
RFFLQ8WZ73 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.79■■■□□ 2.52
RFFLQ8WZ73 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.77■■■□□ 2.52
RFFLQ8WZ73 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.73■■■□□ 2.51
RFFLQ8WZ73 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
RFFLQ8WZ73 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RFFLQ8WZ73 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RFFLQ8WZ73 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RFFLQ8WZ73 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
RFFLQ8WZ73 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RFFLQ8WZ73 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms