Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC41.85■■■■■ 4.29
TRPM4Q8TD43 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC41.67■■■■■ 4.26
TRPM4Q8TD43 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC41.14■■■■■ 4.18
TRPM4Q8TD43 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC40.83■■■■■ 4.13
TRPM4Q8TD43 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
TRPM4Q8TD43 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC40.11■■■■■ 4.01
TRPM4Q8TD43 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC39.89■■■■□ 3.98
TRPM4Q8TD43 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
TRPM4Q8TD43 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC39.75■■■■□ 3.95
TRPM4Q8TD43 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC39.73■■■■□ 3.95
TRPM4Q8TD43 AL356512.1-201ENST00000607453 1739 ntBASIC39.72■■■■□ 3.95
TRPM4Q8TD43 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
TRPM4Q8TD43 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC39.51■■■■□ 3.92
TRPM4Q8TD43 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC39.48■■■■□ 3.91
TRPM4Q8TD43 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
TRPM4Q8TD43 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
TRPM4Q8TD43 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC38.95■■■■□ 3.83
TRPM4Q8TD43 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC38.94■■■■□ 3.82
TRPM4Q8TD43 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC38.82■■■■□ 3.8
TRPM4Q8TD43 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
TRPM4Q8TD43 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
TRPM4Q8TD43 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC38.57■■■■□ 3.76
TRPM4Q8TD43 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC38.57■■■■□ 3.76
TRPM4Q8TD43 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
TRPM4Q8TD43 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
TRPM4Q8TD43 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC38.45■■■■□ 3.75
TRPM4Q8TD43 INO80B-203ENST00000409917 796 ntTSL 2 BASIC38.39■■■■□ 3.74
TRPM4Q8TD43 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC38.34■■■■□ 3.73
TRPM4Q8TD43 HES6-203ENST00000409160 1600 ntTSL 2 BASIC38.05■■■■□ 3.68
TRPM4Q8TD43 ZNRF2P1-201ENST00000441407 443 ntBASIC38.05■■■■□ 3.68
TRPM4Q8TD43 AC006077.2-201ENST00000623591 457 ntBASIC37.99■■■■□ 3.67
TRPM4Q8TD43 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
TRPM4Q8TD43 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC37.97■■■■□ 3.67
TRPM4Q8TD43 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC37.85■■■■□ 3.65
TRPM4Q8TD43 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC37.83■■■■□ 3.65
TRPM4Q8TD43 AC015813.7-201ENST00000623294 581 ntBASIC37.7■■■■□ 3.63
TRPM4Q8TD43 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC37.69■■■■□ 3.62
TRPM4Q8TD43 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC37.67■■■■□ 3.62
TRPM4Q8TD43 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC37.54■■■■□ 3.6
TRPM4Q8TD43 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
TRPM4Q8TD43 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC37.24■■■■□ 3.55
TRPM4Q8TD43 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
TRPM4Q8TD43 AP002365.1-201ENST00000603448 772 ntBASIC37.12■■■■□ 3.53
TRPM4Q8TD43 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC37■■■■□ 3.51
TRPM4Q8TD43 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC36.92■■■■□ 3.5
TRPM4Q8TD43 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC36.89■■■■□ 3.5
TRPM4Q8TD43 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC36.88■■■■□ 3.5
TRPM4Q8TD43 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC36.88■■■■□ 3.49
TRPM4Q8TD43 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
TRPM4Q8TD43 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC36.85■■■■□ 3.49
TRPM4Q8TD43 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC36.84■■■■□ 3.49
TRPM4Q8TD43 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
TRPM4Q8TD43 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
TRPM4Q8TD43 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC36.75■■■■□ 3.47
TRPM4Q8TD43 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC36.73■■■■□ 3.47
TRPM4Q8TD43 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC36.72■■■■□ 3.47
TRPM4Q8TD43 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
TRPM4Q8TD43 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
TRPM4Q8TD43 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC36.62■■■■□ 3.45
TRPM4Q8TD43 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC36.61■■■■□ 3.45
TRPM4Q8TD43 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC36.49■■■■□ 3.43
TRPM4Q8TD43 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
TRPM4Q8TD43 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC36.44■■■■□ 3.42
TRPM4Q8TD43 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC36.4■■■■□ 3.42
TRPM4Q8TD43 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
TRPM4Q8TD43 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC36.33■■■■□ 3.41
TRPM4Q8TD43 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC36.32■■■■□ 3.4
TRPM4Q8TD43 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
TRPM4Q8TD43 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC36.27■■■■□ 3.4
TRPM4Q8TD43 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC36.25■■■■□ 3.39
TRPM4Q8TD43 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC36.24■■■■□ 3.39
TRPM4Q8TD43 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
TRPM4Q8TD43 DYNLL1-208ENST00000550178 581 ntBASIC36.19■■■■□ 3.38
TRPM4Q8TD43 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC36.19■■■■□ 3.38
TRPM4Q8TD43 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
TRPM4Q8TD43 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
TRPM4Q8TD43 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
TRPM4Q8TD43 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
TRPM4Q8TD43 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC36.12■■■■□ 3.37
TRPM4Q8TD43 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC36.09■■■■□ 3.37
TRPM4Q8TD43 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
TRPM4Q8TD43 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC36.05■■■■□ 3.36
TRPM4Q8TD43 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC36.02■■■■□ 3.36
TRPM4Q8TD43 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
TRPM4Q8TD43 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
TRPM4Q8TD43 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
TRPM4Q8TD43 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC35.95■■■■□ 3.35
TRPM4Q8TD43 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
TRPM4Q8TD43 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC35.92■■■■□ 3.34
TRPM4Q8TD43 AL031258.1-201ENST00000623562 325 ntBASIC35.9■■■■□ 3.34
TRPM4Q8TD43 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC35.89■■■■□ 3.34
TRPM4Q8TD43 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC35.86■■■■□ 3.33
TRPM4Q8TD43 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC35.78■■■■□ 3.32
TRPM4Q8TD43 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC35.78■■■■□ 3.32
TRPM4Q8TD43 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC35.77■■■■□ 3.32
TRPM4Q8TD43 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC35.72■■■■□ 3.31
TRPM4Q8TD43 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
TRPM4Q8TD43 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC35.72■■■■□ 3.31
TRPM4Q8TD43 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC35.72■■■■□ 3.31
TRPM4Q8TD43 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms