Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.57■■■■□ 3.44
PTCRAQ6ISU1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.34■■■■□ 3.41
PTCRAQ6ISU1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.15■■■■□ 3.38
PTCRAQ6ISU1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
PTCRAQ6ISU1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
PTCRAQ6ISU1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.06■■■■□ 3.2
PTCRAQ6ISU1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.98■■■■□ 3.19
PTCRAQ6ISU1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
PTCRAQ6ISU1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.9■■■■□ 3.18
PTCRAQ6ISU1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.73■■■■□ 3.15
PTCRAQ6ISU1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
PTCRAQ6ISU1 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.5■■■■□ 3.11
PTCRAQ6ISU1 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.41■■■■□ 3.1
PTCRAQ6ISU1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
PTCRAQ6ISU1 AL356512.1-201ENST00000607453 1739 ntBASIC34.35■■■■□ 3.09
PTCRAQ6ISU1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
PTCRAQ6ISU1 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC34.04■■■■□ 3.04
PTCRAQ6ISU1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.94■■■■□ 3.02
PTCRAQ6ISU1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
PTCRAQ6ISU1 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.91■■■■□ 3.02
PTCRAQ6ISU1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
PTCRAQ6ISU1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
PTCRAQ6ISU1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.86■■■■□ 3.01
PTCRAQ6ISU1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.85■■■■□ 3.01
PTCRAQ6ISU1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
PTCRAQ6ISU1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.58■■■□□ 2.97
PTCRAQ6ISU1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.56■■■□□ 2.96
PTCRAQ6ISU1 ZNRF2P1-201ENST00000441407 443 ntBASIC33.55■■■□□ 2.96
PTCRAQ6ISU1 AC006077.2-201ENST00000623591 457 ntBASIC33.49■■■□□ 2.95
PTCRAQ6ISU1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.35■■■□□ 2.93
PTCRAQ6ISU1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
PTCRAQ6ISU1 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.24■■■□□ 2.91
PTCRAQ6ISU1 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.14■■■□□ 2.9
PTCRAQ6ISU1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
PTCRAQ6ISU1 AC015813.7-201ENST00000623294 581 ntBASIC32.98■■■□□ 2.87
PTCRAQ6ISU1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
PTCRAQ6ISU1 AP002365.1-201ENST00000603448 772 ntBASIC32.7■■■□□ 2.83
PTCRAQ6ISU1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.66■■■□□ 2.82
PTCRAQ6ISU1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.63■■■□□ 2.81
PTCRAQ6ISU1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
PTCRAQ6ISU1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.49■■■□□ 2.79
PTCRAQ6ISU1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
PTCRAQ6ISU1 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
PTCRAQ6ISU1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PTCRAQ6ISU1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.43■■■□□ 2.78
PTCRAQ6ISU1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.4■■■□□ 2.78
PTCRAQ6ISU1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.39■■■□□ 2.78
PTCRAQ6ISU1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.38■■■□□ 2.77
PTCRAQ6ISU1 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.29■■■□□ 2.76
PTCRAQ6ISU1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.26■■■□□ 2.76
PTCRAQ6ISU1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.25■■■□□ 2.75
PTCRAQ6ISU1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.24■■■□□ 2.75
PTCRAQ6ISU1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.16■■■□□ 2.74
PTCRAQ6ISU1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.16■■■□□ 2.74
PTCRAQ6ISU1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
PTCRAQ6ISU1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.14■■■□□ 2.74
PTCRAQ6ISU1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PTCRAQ6ISU1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
PTCRAQ6ISU1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
PTCRAQ6ISU1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.03■■■□□ 2.72
PTCRAQ6ISU1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.02■■■□□ 2.72
PTCRAQ6ISU1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
PTCRAQ6ISU1 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PTCRAQ6ISU1 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PTCRAQ6ISU1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.87■■■□□ 2.69
PTCRAQ6ISU1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
PTCRAQ6ISU1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PTCRAQ6ISU1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.83■■■□□ 2.69
PTCRAQ6ISU1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.82■■■□□ 2.68
PTCRAQ6ISU1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PTCRAQ6ISU1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PTCRAQ6ISU1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PTCRAQ6ISU1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.69■■■□□ 2.66
PTCRAQ6ISU1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PTCRAQ6ISU1 DYNLL1-208ENST00000550178 581 ntBASIC31.67■■■□□ 2.66
PTCRAQ6ISU1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
PTCRAQ6ISU1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
PTCRAQ6ISU1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PTCRAQ6ISU1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PTCRAQ6ISU1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.53■■■□□ 2.64
PTCRAQ6ISU1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PTCRAQ6ISU1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PTCRAQ6ISU1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.49■■■□□ 2.63
PTCRAQ6ISU1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
PTCRAQ6ISU1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.49■■■□□ 2.63
PTCRAQ6ISU1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.47■■■□□ 2.63
PTCRAQ6ISU1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.45■■■□□ 2.63
PTCRAQ6ISU1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PTCRAQ6ISU1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.44■■■□□ 2.62
PTCRAQ6ISU1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PTCRAQ6ISU1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PTCRAQ6ISU1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PTCRAQ6ISU1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PTCRAQ6ISU1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.4■■■□□ 2.62
PTCRAQ6ISU1 AL031258.1-201ENST00000623562 325 ntBASIC31.4■■■□□ 2.62
PTCRAQ6ISU1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PTCRAQ6ISU1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.37■■■□□ 2.61
PTCRAQ6ISU1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.37■■■□□ 2.61
PTCRAQ6ISU1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.37■■■□□ 2.61
PTCRAQ6ISU1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms