Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.46■■■□□ 2.95
CDKN2DP55273 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CDKN2DP55273 AL356512.1-201ENST00000607453 1739 ntBASIC32.86■■■□□ 2.85
CDKN2DP55273 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
CDKN2DP55273 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.62■■■□□ 2.81
CDKN2DP55273 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.59■■■□□ 2.81
CDKN2DP55273 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDKN2DP55273 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.35■■■□□ 2.77
CDKN2DP55273 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CDKN2DP55273 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32■■■□□ 2.71
CDKN2DP55273 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
CDKN2DP55273 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.92■■■□□ 2.7
CDKN2DP55273 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.62■■■□□ 2.65
CDKN2DP55273 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDKN2DP55273 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
CDKN2DP55273 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
CDKN2DP55273 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDKN2DP55273 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.18■■■□□ 2.58
CDKN2DP55273 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CDKN2DP55273 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
CDKN2DP55273 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
CDKN2DP55273 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.82■■■□□ 2.52
CDKN2DP55273 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CDKN2DP55273 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDKN2DP55273 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
CDKN2DP55273 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
CDKN2DP55273 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CDKN2DP55273 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
CDKN2DP55273 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.55■■■□□ 2.48
CDKN2DP55273 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDKN2DP55273 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.48
CDKN2DP55273 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
CDKN2DP55273 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDKN2DP55273 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.42■■■□□ 2.46
CDKN2DP55273 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDKN2DP55273 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDKN2DP55273 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.25■■■□□ 2.43
CDKN2DP55273 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.18■■■□□ 2.42
CDKN2DP55273 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDKN2DP55273 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
CDKN2DP55273 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.01■■■□□ 2.39
CDKN2DP55273 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CDKN2DP55273 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.95■■■□□ 2.38
CDKN2DP55273 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CDKN2DP55273 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.78■■■□□ 2.36
CDKN2DP55273 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
CDKN2DP55273 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDKN2DP55273 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.73■■■□□ 2.35
CDKN2DP55273 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
CDKN2DP55273 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
CDKN2DP55273 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CDKN2DP55273 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.57■■■□□ 2.32
CDKN2DP55273 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CDKN2DP55273 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
CDKN2DP55273 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CDKN2DP55273 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CDKN2DP55273 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CDKN2DP55273 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CDKN2DP55273 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CDKN2DP55273 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.38■■■□□ 2.29
CDKN2DP55273 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.34■■■□□ 2.29
CDKN2DP55273 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CDKN2DP55273 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29.32■■■□□ 2.28
CDKN2DP55273 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CDKN2DP55273 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CDKN2DP55273 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDKN2DP55273 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
CDKN2DP55273 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
CDKN2DP55273 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDKN2DP55273 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDKN2DP55273 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDKN2DP55273 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
CDKN2DP55273 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
CDKN2DP55273 AC015813.7-201ENST00000623294 581 ntBASIC29.05■■■□□ 2.24
CDKN2DP55273 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.04■■■□□ 2.24
CDKN2DP55273 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDKN2DP55273 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CDKN2DP55273 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CDKN2DP55273 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
CDKN2DP55273 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.92■■■□□ 2.22
CDKN2DP55273 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CDKN2DP55273 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
CDKN2DP55273 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.9■■■□□ 2.22
CDKN2DP55273 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CDKN2DP55273 AC145285.7-201ENST00000614819 1539 ntBASIC28.81■■■□□ 2.2
CDKN2DP55273 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CDKN2DP55273 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDKN2DP55273 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDKN2DP55273 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CDKN2DP55273 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CDKN2DP55273 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
CDKN2DP55273 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CDKN2DP55273 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.68■■■□□ 2.18
CDKN2DP55273 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
CDKN2DP55273 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDKN2DP55273 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.63■■■□□ 2.17
CDKN2DP55273 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CDKN2DP55273 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CDKN2DP55273 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.59■■■□□ 2.17
CDKN2DP55273 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms