Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
UBE2AP49459 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2AP49459 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
UBE2AP49459 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2AP49459 AL356512.1-201ENST00000607453 1739 ntBASIC20.4■□□□□ 0.86
UBE2AP49459 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
UBE2AP49459 HES6-203ENST00000409160 1600 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2AP49459 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE2AP49459 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBE2AP49459 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
UBE2AP49459 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE2AP49459 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2AP49459 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2AP49459 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2AP49459 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
UBE2AP49459 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2AP49459 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.67■□□□□ 0.74
UBE2AP49459 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE2AP49459 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
UBE2AP49459 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2AP49459 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2AP49459 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2AP49459 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE2AP49459 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2AP49459 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
UBE2AP49459 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC19.3■□□□□ 0.68
UBE2AP49459 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE2AP49459 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
UBE2AP49459 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UBE2AP49459 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2AP49459 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
UBE2AP49459 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2AP49459 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2AP49459 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2AP49459 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2AP49459 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
UBE2AP49459 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
UBE2AP49459 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
UBE2AP49459 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
UBE2AP49459 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2AP49459 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UBE2AP49459 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC18.99■□□□□ 0.63
UBE2AP49459 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2AP49459 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2AP49459 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBE2AP49459 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
UBE2AP49459 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.91■□□□□ 0.62
UBE2AP49459 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UBE2AP49459 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2AP49459 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC18.88■□□□□ 0.61
UBE2AP49459 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBE2AP49459 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
UBE2AP49459 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBE2AP49459 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.85■□□□□ 0.61
UBE2AP49459 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC18.78■□□□□ 0.6
UBE2AP49459 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBE2AP49459 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC18.74■□□□□ 0.59
UBE2AP49459 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBE2AP49459 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.67■□□□□ 0.58
UBE2AP49459 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
UBE2AP49459 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
UBE2AP49459 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC18.58■□□□□ 0.56
UBE2AP49459 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBE2AP49459 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
UBE2AP49459 ILK-212ENST00000532063 1617 ntTSL 2 BASIC18.47■□□□□ 0.55
UBE2AP49459 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBE2AP49459 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBE2AP49459 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2AP49459 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
UBE2AP49459 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
UBE2AP49459 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
UBE2AP49459 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC18.4■□□□□ 0.54
UBE2AP49459 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2AP49459 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
UBE2AP49459 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBE2AP49459 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE2AP49459 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2AP49459 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE2AP49459 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC18.32■□□□□ 0.52
UBE2AP49459 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBE2AP49459 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
UBE2AP49459 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2AP49459 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2AP49459 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBE2AP49459 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC18.27■□□□□ 0.52
UBE2AP49459 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UBE2AP49459 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2AP49459 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBE2AP49459 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE2AP49459 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UBE2AP49459 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBE2AP49459 INO80B-203ENST00000409917 796 ntTSL 2 BASIC18.18■□□□□ 0.5
UBE2AP49459 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2AP49459 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2AP49459 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
UBE2AP49459 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2AP49459 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
UBE2AP49459 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UBE2AP49459 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBE2AP49459 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms