Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.663e-6■■■□□ 14.6
MATR3P43243 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66not detected
MATR3P43243 AP002365.1-201ENST00000603448 772 ntBASIC31.64■■■□□ 2.66not detected
MATR3P43243 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.63■■■□□ 2.65not detected
MATR3P43243 AC145285.7-201ENST00000614819 1539 ntBASIC31.63■■■□□ 2.65not detected
MATR3P43243 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.6■■■□□ 2.651e-6■■■■■ 30.5
MATR3P43243 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65not detected
MATR3P43243 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65not detected
MATR3P43243 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65not detected
MATR3P43243 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65not detected
MATR3P43243 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.65not detected
MATR3P43243 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.57■■■□□ 2.64not detected
MATR3P43243 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64not detected
MATR3P43243 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.53■■■□□ 2.642e-6■■■□□ 19.2
MATR3P43243 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64not detected
MATR3P43243 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.51■■■□□ 2.63not detected
MATR3P43243 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63not detected
MATR3P43243 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63not detected
MATR3P43243 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.49■■■□□ 2.632e-6■■■■■ 30.2
MATR3P43243 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.49■■■□□ 2.63not detected
MATR3P43243 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.48■■■□□ 2.63not detected
MATR3P43243 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63not detected
MATR3P43243 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63not detected
MATR3P43243 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62not detected
MATR3P43243 DYNLL1-208ENST00000550178 581 ntBASIC31.44■■■□□ 2.62not detected
MATR3P43243 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62not detected
MATR3P43243 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.43■■■□□ 2.621e-8■■■■□ 25.4
MATR3P43243 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62not detected
MATR3P43243 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.42■■■□□ 2.62not detected
MATR3P43243 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.39■■■□□ 2.62not detected
MATR3P43243 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.39■■■□□ 2.62not detected
MATR3P43243 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61not detected
MATR3P43243 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.37■■■□□ 2.61not detected
MATR3P43243 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61not detected
MATR3P43243 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61not detected
MATR3P43243 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61not detected
MATR3P43243 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61not detected
MATR3P43243 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.31■■■□□ 2.6not detected
MATR3P43243 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6not detected
MATR3P43243 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.3■■■□□ 2.6not detected
MATR3P43243 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.29■■■□□ 2.65e-13■■■■□ 22
MATR3P43243 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.28■■■□□ 2.6not detected
MATR3P43243 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.27■■■□□ 2.6not detected
MATR3P43243 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59not detected
MATR3P43243 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.22■■■□□ 2.59not detected
MATR3P43243 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58not detected
MATR3P43243 AL031258.1-201ENST00000623562 325 ntBASIC31.18■■■□□ 2.58not detected
MATR3P43243 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58not detected
MATR3P43243 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58not detected
MATR3P43243 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.14■■■□□ 2.58not detected
MATR3P43243 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57not detected
MATR3P43243 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57not detected
MATR3P43243 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57not detected
MATR3P43243 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56not detected
MATR3P43243 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.04■■■□□ 2.56not detected
MATR3P43243 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55not detected
MATR3P43243 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55not detected
MATR3P43243 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55not detected
MATR3P43243 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55not detected
MATR3P43243 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54not detected
MATR3P43243 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54not detected
MATR3P43243 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.92■■■□□ 2.54not detected
MATR3P43243 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.92■■■□□ 2.54not detected
MATR3P43243 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.92■■■□□ 2.54not detected
MATR3P43243 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.92■■■□□ 2.54not detected
MATR3P43243 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.548e-7■■■■□ 23.2
MATR3P43243 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.91■■■□□ 2.54not detected
MATR3P43243 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54not detected
MATR3P43243 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.9■■■□□ 2.54not detected
MATR3P43243 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.89■■■□□ 2.54not detected
MATR3P43243 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.538e-7■■■■■ 30
MATR3P43243 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.89■■■□□ 2.53not detected
MATR3P43243 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.88■■■□□ 2.53not detected
MATR3P43243 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.87■■■□□ 2.53not detected
MATR3P43243 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53not detected
MATR3P43243 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53not detected
MATR3P43243 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53not detected
MATR3P43243 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53not detected
MATR3P43243 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.82■■■□□ 2.523e-7■■■■■ 36.3
MATR3P43243 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.527e-7■■■■■ 29.3
MATR3P43243 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52not detected
MATR3P43243 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.78■■■□□ 2.52not detected
MATR3P43243 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52not detected
MATR3P43243 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.526e-7■■■■■ 28.2
MATR3P43243 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.75■■■□□ 2.51not detected
MATR3P43243 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51not detected
MATR3P43243 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.73■■■□□ 2.51not detected
MATR3P43243 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.72■■■□□ 2.51not detected
MATR3P43243 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.72■■■□□ 2.51not detected
MATR3P43243 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51not detected
MATR3P43243 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51not detected
MATR3P43243 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51not detected
MATR3P43243 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5not detected
MATR3P43243 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5not detected
MATR3P43243 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5not detected
MATR3P43243 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5not detected
MATR3P43243 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.65■■■□□ 2.5not detected
MATR3P43243 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5not detected
MATR3P43243 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.64■■■□□ 2.5not detected
MATR3P43243 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49not detected
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms