Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.4□□□□□ -1.231e-7■■■■■ 44.7
MATR3P43243 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.09□□□□□ -1.271e-7■■■■■ 44.7
MATR3P43243 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.361e-12■■■■■ 44.7
MATR3P43243 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC9.62□□□□□ -0.872e-6■■■■■ 44.7
MATR3P43243 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.38□□□□□ -1.072e-6■■■■■ 44.7
MATR3P43243 PSMA3-AS1-212ENST00000556400 604 ntTSL 215.4■□□□□ 0.064e-9■■■■■ 44.1
MATR3P43243 PSMA3-AS1-208ENST00000555275 903 ntTSL 2 BASIC13.1□□□□□ -0.314e-9■■■■■ 44.1
MATR3P43243 PSMA3-AS1-214ENST00000557660 2360 ntTSL 2 BASIC11.26□□□□□ -0.614e-9■■■■■ 44.1
MATR3P43243 PSMA3-AS1-209ENST00000555707 1983 ntTSL 1 (best)11.22□□□□□ -0.614e-9■■■■■ 44.1
MATR3P43243 PSMA3-AS1-205ENST00000554378 741 ntTSL 1 (best)10.75□□□□□ -0.694e-9■■■■■ 44.1
MATR3P43243 PSMA3-AS1-204ENST00000554360 2475 ntTSL 1 (best) BASIC10.45□□□□□ -0.744e-9■■■■■ 44.1
MATR3P43243 PSMA3-AS1-210ENST00000556002 1039 ntTSL 2 BASIC9.14□□□□□ -0.954e-9■■■■■ 44.1
MATR3P43243 C14orf37-203ENST00000554218 572 ntTSL 48.73□□□□□ -1.014e-9■■■■■ 44.1
MATR3P43243 PSMA3-AS1-202ENST00000553657 398 ntTSL 35.81□□□□□ -1.484e-9■■■■■ 44.1
MATR3P43243 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.44■■□□□ 1.663e-12■■■■■ 43.7
MATR3P43243 RNPEP-212ENST00000492587 780 ntTSL 523.76■■□□□ 1.393e-12■■■■■ 43.7
MATR3P43243 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.353e-12■■■■■ 43.7
MATR3P43243 RNPEP-209ENST00000479726 822 ntTSL 517.29■□□□□ 0.363e-12■■■■■ 43.7
MATR3P43243 RNPEP-203ENST00000447312 1166 ntTSL 513.84□□□□□ -0.193e-12■■■■■ 43.7
MATR3P43243 RNPEP-206ENST00000471105 2093 ntTSL 1 (best)13.46□□□□□ -0.263e-12■■■■■ 43.7
MATR3P43243 RNPEP-207ENST00000478617 1069 ntTSL 512.17□□□□□ -0.463e-12■■■■■ 43.7
MATR3P43243 RNPEP-213ENST00000492849 958 ntTSL 512.06□□□□□ -0.483e-12■■■■■ 43.7
MATR3P43243 RNPEP-210ENST00000481780 847 ntTSL 511.84□□□□□ -0.513e-12■■■■■ 43.7
MATR3P43243 RNPEP-211ENST00000487116 851 ntTSL 310.37□□□□□ -0.753e-12■■■■■ 43.7
MATR3P43243 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.063e-12■■■■■ 43.7
MATR3P43243 TRIP11-204ENST00000555516 564 ntAPPRIS ALT2 TSL 52.38□□□□□ -2.033e-12■■■■■ 43.7
MATR3P43243 ZMYM4-203ENST00000457946 6003 ntTSL 56.42□□□□□ -1.382e-7■■■■■ 43.4
MATR3P43243 AFF4-209ENST00000491831 1667 ntTSL 1 (best)18.57■□□□□ 0.564e-12■■■■■ 42.9
MATR3P43243 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.344e-12■■■■■ 42.9
MATR3P43243 AFF4-203ENST00000378595 3348 ntTSL 1 (best) BASIC13.49□□□□□ -0.254e-12■■■■■ 42.9
MATR3P43243 AFF4-205ENST00000425658 513 ntTSL 55.25□□□□□ -1.574e-12■■■■■ 42.9
MATR3P43243 AFF4-202ENST00000378593 430 ntTSL 55.11□□□□□ -1.594e-12■■■■■ 42.9
MATR3P43243 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.278e-9■■■■■ 42.7
MATR3P43243 PPP2R5E-203ENST00000553266 1690 ntTSL 1 (best)20.95■□□□□ 0.948e-9■■■■■ 42.7
MATR3P43243 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.188e-9■■■■■ 42.7
MATR3P43243 PPP2R5E-207ENST00000556878 3371 ntTSL 1 (best)14.71□□□□□ -0.058e-9■■■■■ 42.7
MATR3P43243 PPP2R5E-206ENST00000556484 1465 ntTSL 29.91□□□□□ -0.828e-9■■■■■ 42.7
MATR3P43243 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.26□□□□□ -1.418e-9■■■■■ 42.7
MATR3P43243 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.295e-12■■■■■ 42.7
MATR3P43243 EIF3D-203ENST00000405442 1851 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.675e-12■■■■■ 42.7
MATR3P43243 EIF3D-204ENST00000426531 710 ntTSL 210.68□□□□□ -0.75e-12■■■■■ 42.7
MATR3P43243 EIF3D-208ENST00000458572 883 ntTSL 39.39□□□□□ -0.915e-12■■■■■ 42.7
MATR3P43243 EIF3D-210ENST00000462794 764 ntTSL 26.94□□□□□ -1.35e-12■■■■■ 42.7
MATR3P43243 AGPAT5-207ENST00000533648 560 ntTSL 43.4□□□□□ -1.876e-7■■■■■ 42.7
MATR3P43243 ZC3H11A-206ENST00000453771 1892 ntTSL 512.3□□□□□ -0.441e-10■■■■■ 42.4
MATR3P43243 ZC3H11A-205ENST00000432282 682 ntTSL 510.28□□□□□ -0.761e-10■■■■■ 42.4
MATR3P43243 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.011e-10■■■■■ 42.4
MATR3P43243 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.141e-10■■■■■ 42.4
MATR3P43243 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.211e-10■■■■■ 42.4
MATR3P43243 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.241e-10■■■■■ 42.4
MATR3P43243 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.351e-10■■■■■ 42.4
MATR3P43243 ZC3H11A-213ENST00000638800 7078 ntTSL 56.25□□□□□ -1.411e-10■■■■■ 42.4
MATR3P43243 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.09□□□□□ -1.441e-10■■■■■ 42.4
MATR3P43243 ZC3H11A-212ENST00000495527 8404 ntTSL 1 (best)5.84□□□□□ -1.471e-10■■■■■ 42.4
MATR3P43243 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.661e-10■■■■■ 42.4
MATR3P43243 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.329e-12■■■■■ 42.3
MATR3P43243 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.81□□□□□ -1.489e-12■■■■■ 42.3
MATR3P43243 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.16□□□□□ -1.749e-12■■■■■ 42.3
MATR3P43243 IL23R-204ENST00000473881 1507 ntTSL 1 (best)3.89□□□□□ -1.799e-12■■■■■ 42.3
MATR3P43243 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.25□□□□□ -1.899e-12■■■■■ 42.3
MATR3P43243 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.995e-7■■■■■ 42.2
MATR3P43243 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.815e-7■■■■■ 42.2
MATR3P43243 PCGF3-205ENST00000430644 2621 ntTSL 219.51■□□□□ 0.715e-7■■■■■ 42.2
MATR3P43243 PCGF3-207ENST00000440452 3609 ntTSL 214.02□□□□□ -0.175e-7■■■■■ 42.2
MATR3P43243 PCGF3-212ENST00000488032 263 ntTSL 44.92□□□□□ -1.625e-7■■■■■ 42.2
MATR3P43243 SPRED1-202ENST00000561205 1177 ntTSL 523.35■■□□□ 1.331e-11■■■■■ 41.7
MATR3P43243 SLC7A1-202ENST00000450494 547 ntTSL 218.74■□□□□ 0.591e-11■■■■■ 41.7
MATR3P43243 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.371e-11■■■■■ 41.7
MATR3P43243 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.131e-11■■■■■ 41.7
MATR3P43243 SPRED1-203ENST00000561317 527 ntTSL 47.44□□□□□ -1.221e-11■■■■■ 41.7
MATR3P43243 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.891e-10■■■■■ 41.7
MATR3P43243 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.671e-10■■■■■ 41.7
MATR3P43243 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.621e-10■■■■■ 41.7
MATR3P43243 ATXN2-204ENST00000392645 2842 ntTSL 215.98■□□□□ 0.151e-10■■■■■ 41.7
MATR3P43243 ATXN2-218ENST00000549455 568 ntTSL 415.85■□□□□ 0.131e-10■■■■■ 41.7
MATR3P43243 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.141e-10■■■■■ 41.7
MATR3P43243 ATXN2-210ENST00000483311 4159 ntTSL 1 (best)13.21□□□□□ -0.291e-10■■■■■ 41.7
MATR3P43243 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.161e-10■■■■■ 41.7
MATR3P43243 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.311e-10■■■■■ 41.7
MATR3P43243 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.41e-10■■■■■ 41.7
MATR3P43243 ATXN2-206ENST00000471866 836 ntTSL 45.7□□□□□ -1.51e-10■■■■■ 41.7
MATR3P43243 ATXN2-217ENST00000548492 556 ntTSL 45.46□□□□□ -1.541e-10■■■■■ 41.7
MATR3P43243 PTPRF-206ENST00000429895 6312 ntTSL 1 (best)18.29■□□□□ 0.527e-14■■■■■ 41.6
MATR3P43243 PTPRF-215ENST00000496447 5887 ntTSL 1 (best)15.44■□□□□ 0.067e-14■■■■■ 41.6
MATR3P43243 PTPRF-205ENST00000414879 4836 ntTSL 213.71□□□□□ -0.217e-14■■■■■ 41.6
MATR3P43243 PTPRF-203ENST00000372407 4600 ntTSL 213.14□□□□□ -0.317e-14■■■■■ 41.6
MATR3P43243 PTPRF-204ENST00000412568 4154 ntTSL 512.72□□□□□ -0.377e-14■■■■■ 41.6
MATR3P43243 TMEM161B-AS1-203ENST00000501869 684 ntTSL 1 (best)20.15■□□□□ 0.823e-13■■■■■ 41.6
MATR3P43243 TMEM161B-AS1-205ENST00000504769 548 ntTSL 417.46■□□□□ 0.393e-13■■■■■ 41.6
MATR3P43243 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.46■□□□□ 0.393e-13■■■■■ 41.6
MATR3P43243 TMEM161B-AS1-206ENST00000504922 585 ntTSL 216.89■□□□□ 0.293e-13■■■■■ 41.6
MATR3P43243 TMEM161B-AS1-210ENST00000510087 590 ntTSL 315.46■□□□□ 0.073e-13■■■■■ 41.6
MATR3P43243 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC10.97□□□□□ -0.653e-13■■■■■ 41.6
MATR3P43243 TMEM161B-AS1-201ENST00000496733 409 ntTSL 38.62□□□□□ -1.033e-13■■■■■ 41.6
MATR3P43243 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.75□□□□□ -1.493e-13■■■■■ 41.6
MATR3P43243 TMEM161B-AS1-211ENST00000512724 570 ntTSL 35.09□□□□□ -1.593e-13■■■■■ 41.6
MATR3P43243 MLEC-203ENST00000535413 617 ntTSL 210.84□□□□□ -0.672e-10■■■■■ 41.4
MATR3P43243 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.22■□□□□ 0.836e-7■■■■■ 41
MATR3P43243 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC14.65□□□□□ -0.066e-7■■■■■ 41
MATR3P43243 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.88■□□□□ 0.772e-11■■■■■ 40.7
Retrieved 100 of 16,209 protein–RNA pairs in 62.7 ms