RNA–Protein interactions for RNA: ENST00000216190.12

EIF3D-201, Transcript of eukaryotic translation initiation factor 3 subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3D, Length 2,155 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3D-201ENST00000216190 NISCHQ9Y2I1 1504 aa23.33■■□□□ 1.33
EIF3D-201ENST00000216190 SHROOM4Q9ULL8 1493 aa20.25■□□□□ 0.83
EIF3D-201ENST00000216190 SUPT5HO00267 1087 aaKnown RBP20.08■□□□□ 0.8
EIF3D-201ENST00000216190 HRCP23327 699 aa20■□□□□ 0.79
EIF3D-201ENST00000216190 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
EIF3D-201ENST00000216190 ZCCHC6Q5VYS8 1495 aaKnown RBP19.84■□□□□ 0.77
EIF3D-201ENST00000216190 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
EIF3D-201ENST00000216190 PCGF6Q9BYE7 350 aa19.65■□□□□ 0.74
EIF3D-201ENST00000216190 CCDC180Q9P1Z9 1646 aa19.6■□□□□ 0.73
EIF3D-201ENST00000216190 PPARGC1BQ86YN6 1023 aaKnown RBP19.51■□□□□ 0.71
EIF3D-201ENST00000216190 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
EIF3D-201ENST00000216190 LOC105371045A0A1W2PR82 267 aa19.22■□□□□ 0.67
EIF3D-201ENST00000216190 DCAF8L2P0C7V8 631 aa19.19■□□□□ 0.66
EIF3D-201ENST00000216190 TRIM26Q12899 539 aaPredicted RBP19.16■□□□□ 0.66
EIF3D-201ENST00000216190 ZEB1P37275 1124 aaPredicted RBP18.95■□□□□ 0.62
EIF3D-201ENST00000216190 PELP1Q8IZL8 1130 aaKnown RBP18.93■□□□□ 0.62
EIF3D-201ENST00000216190 ABCC9O60706 1549 aa18.83■□□□□ 0.6
EIF3D-201ENST00000216190 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
EIF3D-201ENST00000216190 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
EIF3D-201ENST00000216190 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
EIF3D-201ENST00000216190 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
EIF3D-201ENST00000216190 FAM9AQ8IZU1 332 aaPredicted RBP18.53■□□□□ 0.56
EIF3D-201ENST00000216190 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
EIF3D-201ENST00000216190 ACIN1Q9UKV3 1341 aaKnown RBP18.39■□□□□ 0.53
EIF3D-201ENST00000216190 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
EIF3D-201ENST00000216190 NEUROD1Q13562 356 aa18.32■□□□□ 0.52
EIF3D-201ENST00000216190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.3■□□□□ 0.52
EIF3D-201ENST00000216190 CCER1Q8TC90 406 aaPredicted RBP18.27■□□□□ 0.51
EIF3D-201ENST00000216190 MYT1Q01538 1121 aa18.25■□□□□ 0.51
EIF3D-201ENST00000216190 DIEXFQ68CQ4 756 aaKnown RBP18.2■□□□□ 0.5
EIF3D-201ENST00000216190 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
EIF3D-201ENST00000216190 CENPBP07199 599 aaPredicted RBP18.18■□□□□ 0.5
EIF3D-201ENST00000216190 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
EIF3D-201ENST00000216190 MROH2BQ7Z745 1585 aa18.18■□□□□ 0.5
EIF3D-201ENST00000216190 WIZO95785 1651 aa18.12■□□□□ 0.49
EIF3D-201ENST00000216190 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
EIF3D-201ENST00000216190 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
EIF3D-201ENST00000216190 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
EIF3D-201ENST00000216190 NACADO15069 1562 aa18■□□□□ 0.47
EIF3D-201ENST00000216190 CEP162Q5TB80 1403 aa17.95■□□□□ 0.46
EIF3D-201ENST00000216190 ZNF316A6NFI3 1004 aaPredicted RBP17.94■□□□□ 0.46
EIF3D-201ENST00000216190 TTBK1Q5TCY1 1321 aaPredicted RBP17.91■□□□□ 0.46
EIF3D-201ENST00000216190 CCDC88BA6NC98 1476 aa17.9■□□□□ 0.46
EIF3D-201ENST00000216190 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
EIF3D-201ENST00000216190 TNIKQ9UKE5 1360 aa17.88■□□□□ 0.45
EIF3D-201ENST00000216190 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
EIF3D-201ENST00000216190 SOGA1O94964 1423 aa17.81■□□□□ 0.44
EIF3D-201ENST00000216190 YTHDC1Q96MU7 727 aaKnown RBP17.79■□□□□ 0.44
EIF3D-201ENST00000216190 EEA1Q15075 1411 aa17.77■□□□□ 0.44
EIF3D-201ENST00000216190 MIER1Q8N108 512 aa17.75■□□□□ 0.43
EIF3D-201ENST00000216190 SMARCA2P51531 1590 aa17.75■□□□□ 0.43
EIF3D-201ENST00000216190 CSRNP3Q8WYN3 585 aa17.73■□□□□ 0.43
EIF3D-201ENST00000216190 RUSC2Q8N2Y8 1516 aa17.71■□□□□ 0.43
EIF3D-201ENST00000216190 UBTFP17480 764 aaKnown RBP17.7■□□□□ 0.42
EIF3D-201ENST00000216190 GOLGA3Q08378 1498 aa17.69■□□□□ 0.42
EIF3D-201ENST00000216190 SMARCA4P51532 1647 aa17.68■□□□□ 0.42
EIF3D-201ENST00000216190 HNRNPUL2Q1KMD3 747 aaKnown RBP17.6■□□□□ 0.41
EIF3D-201ENST00000216190 KIF21BO75037 1637 aa17.54■□□□□ 0.4
EIF3D-201ENST00000216190 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
EIF3D-201ENST00000216190 CLIP1P30622 1438 aa17.5■□□□□ 0.39
EIF3D-201ENST00000216190 VPS8Q8N3P4 1428 aa17.5■□□□□ 0.39
EIF3D-201ENST00000216190 CLSPNQ9HAW4 1339 aa17.48■□□□□ 0.39
EIF3D-201ENST00000216190 UNC13AQ9UPW8 1703 aa17.43■□□□□ 0.38
EIF3D-201ENST00000216190 SYNJ1O43426 1573 aa17.43■□□□□ 0.38
EIF3D-201ENST00000216190 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
EIF3D-201ENST00000216190 SUPT16HQ9Y5B9 1047 aaKnown RBP17.4■□□□□ 0.38
EIF3D-201ENST00000216190 APLP2Q06481 763 aa17.39■□□□□ 0.37
EIF3D-201ENST00000216190 DHX57Q6P158 1386 aaKnown RBP17.36■□□□□ 0.37
EIF3D-201ENST00000216190 RAPGEF2Q9Y4G8 1499 aa17.35■□□□□ 0.37
EIF3D-201ENST00000216190 PEG3Q9GZU2 1588 aa17.31■□□□□ 0.36
EIF3D-201ENST00000216190 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
EIF3D-201ENST00000216190 RANGAP1P46060 587 aaPredicted RBP17.22■□□□□ 0.35
EIF3D-201ENST00000216190 SLC24A1O60721 1099 aa17.19■□□□□ 0.34
EIF3D-201ENST00000216190 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
EIF3D-201ENST00000216190 ANP32EQ9BTT0 268 aa17.18■□□□□ 0.34
EIF3D-201ENST00000216190 RRBP1Q9P2E9 1410 aaKnown RBP17.18■□□□□ 0.34
EIF3D-201ENST00000216190 CUX2O14529 1486 aa17.17■□□□□ 0.34
EIF3D-201ENST00000216190 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
EIF3D-201ENST00000216190 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
EIF3D-201ENST00000216190 BICRAQ9NZM4 1560 aa17.16■□□□□ 0.34
EIF3D-201ENST00000216190 KANK4Q5T7N3 995 aaPredicted RBP17.16■□□□□ 0.34
EIF3D-201ENST00000216190 PRXQ9BXM0 1461 aa17.12■□□□□ 0.33
EIF3D-201ENST00000216190 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
EIF3D-201ENST00000216190 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
EIF3D-201ENST00000216190 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
EIF3D-201ENST00000216190 KCNH8Q96L42 1107 aa17.08■□□□□ 0.32
EIF3D-201ENST00000216190 CCNB3Q8WWL7 1395 aa17.06■□□□□ 0.32
EIF3D-201ENST00000216190 MAPKBP1O60336 1514 aa17.02■□□□□ 0.31
EIF3D-201ENST00000216190 PRKCSHP14314 528 aaPredicted RBP17■□□□□ 0.31
EIF3D-201ENST00000216190 BCANQ96GW7 911 aa16.98■□□□□ 0.31
EIF3D-201ENST00000216190 RAB3GAP2Q9H2M9 1393 aa16.98■□□□□ 0.31
EIF3D-201ENST00000216190 FKBP8Q14318 412 aa16.97■□□□□ 0.31
EIF3D-201ENST00000216190 ARHGAP35Q9NRY4 1499 aa16.95■□□□□ 0.3
EIF3D-201ENST00000216190 ITGAEP38570 1179 aa16.94■□□□□ 0.3
EIF3D-201ENST00000216190 BCL11AQ9H165 835 aa16.92■□□□□ 0.3
EIF3D-201ENST00000216190 WDR97A6NE52 1622 aa16.92■□□□□ 0.3
EIF3D-201ENST00000216190 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
EIF3D-201ENST00000216190 ERICH6Q7L0X2 663 aa16.91■□□□□ 0.3
EIF3D-201ENST00000216190 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
EIF3D-201ENST00000216190 CUX1P39880 1505 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms