RNA–Protein interactions for RNA: ENST00000425658.1

AFF4-205, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 5

Gene AFF4, Length 513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-205ENST00000425658 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
AFF4-205ENST00000425658 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
AFF4-205ENST00000425658 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
AFF4-205ENST00000425658 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
AFF4-205ENST00000425658 PLPPR3Q6T4P5 718 aa18.37■□□□□ 0.53
AFF4-205ENST00000425658 FOXD1Q16676 465 aa18.33■□□□□ 0.52
AFF4-205ENST00000425658 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
AFF4-205ENST00000425658 ADRA2BP18089 450 aa17.54■□□□□ 0.4
AFF4-205ENST00000425658 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
AFF4-205ENST00000425658 MSH5O43196 834 aa16.97■□□□□ 0.31
AFF4-205ENST00000425658 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
AFF4-205ENST00000425658 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
AFF4-205ENST00000425658 MAPK8IP2Q13387 824 aaPredicted RBP15.93■□□□□ 0.14
AFF4-205ENST00000425658 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
AFF4-205ENST00000425658 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
AFF4-205ENST00000425658 CNKSR2Q8WXI2 1034 aa15.73■□□□□ 0.11
AFF4-205ENST00000425658 KCNA4P22459 653 aa15.68■□□□□ 0.1
AFF4-205ENST00000425658 POTEDQ86YR6 584 aa15.56■□□□□ 0.08
AFF4-205ENST00000425658 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
AFF4-205ENST00000425658 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
AFF4-205ENST00000425658 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
AFF4-205ENST00000425658 DCAF8L1A6NGE4 600 aa15.1■□□□□ 0.01
AFF4-205ENST00000425658 DNAJC5BQ9UF47 199 aa15.04■□□□□ -0
AFF4-205ENST00000425658 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
AFF4-205ENST00000425658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.061e-6■■■□□ 15.9
AFF4-205ENST00000425658 SLC4A2P04920 1241 aa14.62□□□□□ -0.07
AFF4-205ENST00000425658 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
AFF4-205ENST00000425658 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
AFF4-205ENST00000425658 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
AFF4-205ENST00000425658 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
AFF4-205ENST00000425658 ZBTB22O15209 634 aa14.41□□□□□ -0.1
AFF4-205ENST00000425658 C1QBPQ07021 282 aaKnown RBP14.35□□□□□ -0.11
AFF4-205ENST00000425658 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
AFF4-205ENST00000425658 CSRNP3Q8WYN3 585 aa14.27□□□□□ -0.13
AFF4-205ENST00000425658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.26□□□□□ -0.13
AFF4-205ENST00000425658 HNRNPUL2Q1KMD3 747 aaKnown RBP14.26□□□□□ -0.13
AFF4-205ENST00000425658 CACNB1Q02641 598 aaPredicted RBP14.21□□□□□ -0.13
AFF4-205ENST00000425658 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
AFF4-205ENST00000425658 APLP2Q06481 763 aa14.14□□□□□ -0.15
AFF4-205ENST00000425658 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
AFF4-205ENST00000425658 CAPN15O75808 1086 aa14.02□□□□□ -0.17
AFF4-205ENST00000425658 ATXN8OSP0DMR3 200 aa13.98□□□□□ -0.17
AFF4-205ENST00000425658 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
AFF4-205ENST00000425658 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
AFF4-205ENST00000425658 ATF5Q9Y2D1 282 aaPredicted RBP13.9□□□□□ -0.18
AFF4-205ENST00000425658 DSG3P32926 999 aa13.77□□□□□ -0.21
AFF4-205ENST00000425658 ABCB7O75027 752 aa13.73□□□□□ -0.21
AFF4-205ENST00000425658 POLA2Q14181 598 aa13.67□□□□□ -0.22
AFF4-205ENST00000425658 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
AFF4-205ENST00000425658 FBLN2P98095 1184 aa13.38□□□□□ -0.27
AFF4-205ENST00000425658 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
AFF4-205ENST00000425658 OSCARQ8IYS5 282 aa13.22□□□□□ -0.29
AFF4-205ENST00000425658 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
AFF4-205ENST00000425658 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
AFF4-205ENST00000425658 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
AFF4-205ENST00000425658 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
AFF4-205ENST00000425658 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
AFF4-205ENST00000425658 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
AFF4-205ENST00000425658 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
AFF4-205ENST00000425658 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
AFF4-205ENST00000425658 FKBP8Q14318 412 aa12.93□□□□□ -0.34
AFF4-205ENST00000425658 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
AFF4-205ENST00000425658 REM2Q8IYK8 340 aaPredicted RBP12.83□□□□□ -0.36
AFF4-205ENST00000425658 PROM2Q8N271 834 aa12.75□□□□□ -0.37
AFF4-205ENST00000425658 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
AFF4-205ENST00000425658 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
AFF4-205ENST00000425658 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
AFF4-205ENST00000425658 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
AFF4-205ENST00000425658 STAG3Q9UJ98 1225 aa12.63□□□□□ -0.39
AFF4-205ENST00000425658 PRR29P0C7W0 189 aa12.55□□□□□ -0.4
AFF4-205ENST00000425658 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
AFF4-205ENST00000425658 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.41
AFF4-205ENST00000425658 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
AFF4-205ENST00000425658 PRKAR2AP13861 404 aaKnown RBP12.38□□□□□ -0.43
AFF4-205ENST00000425658 CHADLQ6NUI6 762 aa12.35□□□□□ -0.43
AFF4-205ENST00000425658 MIER1Q8N108 512 aa12.34□□□□□ -0.43
AFF4-205ENST00000425658 CREBZFQ9NS37 354 aa12.34□□□□□ -0.43
AFF4-205ENST00000425658 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
AFF4-205ENST00000425658 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
AFF4-205ENST00000425658 POTEHQ6S545 545 aa12.32□□□□□ -0.44
AFF4-205ENST00000425658 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
AFF4-205ENST00000425658 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
AFF4-205ENST00000425658 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
AFF4-205ENST00000425658 MNX1P50219 401 aaPredicted RBP12.19□□□□□ -0.46
AFF4-205ENST00000425658 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
AFF4-205ENST00000425658 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
AFF4-205ENST00000425658 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
AFF4-205ENST00000425658 HAX1O00165 279 aa12.08□□□□□ -0.48
AFF4-205ENST00000425658 C19orf67A6NJJ6 358 aa12.04□□□□□ -0.48
AFF4-205ENST00000425658 CD44P16070 742 aaKnown RBP12.03□□□□□ -0.48
AFF4-205ENST00000425658 SPOCK2Q92563 424 aa12.03□□□□□ -0.48
AFF4-205ENST00000425658 NUBP1P53384 320 aa12.01□□□□□ -0.49
AFF4-205ENST00000425658 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
AFF4-205ENST00000425658 RASEFQ8IZ41 740 aa11.98□□□□□ -0.49
AFF4-205ENST00000425658 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
AFF4-205ENST00000425658 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
AFF4-205ENST00000425658 ZRANB1Q9UGI0 708 aa11.94□□□□□ -0.5
AFF4-205ENST00000425658 EVX2Q03828 476 aa11.93□□□□□ -0.5
AFF4-205ENST00000425658 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
AFF4-205ENST00000425658 GSE1Q14687 1217 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms