RNA–Protein interactions for RNA: ENST00000458572.1

EIF3D-208, Transcript of eukaryotic translation initiation factor 3 subunit D, humanhuman

TSL 3

Gene EIF3D, Length 883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3D-208ENST00000458572 NISCHQ9Y2I1 1504 aa20.54■□□□□ 0.88
EIF3D-208ENST00000458572 CCDC180Q9P1Z9 1646 aa18.17■□□□□ 0.5
EIF3D-208ENST00000458572 ABCC9O60706 1549 aa17.62■□□□□ 0.41
EIF3D-208ENST00000458572 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
EIF3D-208ENST00000458572 DCAF8L2P0C7V8 631 aa17.1■□□□□ 0.33
EIF3D-208ENST00000458572 NACADO15069 1562 aa17.02■□□□□ 0.32
EIF3D-208ENST00000458572 RB1CC1Q8TDY2 1594 aa17.01■□□□□ 0.31
EIF3D-208ENST00000458572 DCAF1Q9Y4B6 1507 aa16.98■□□□□ 0.31
EIF3D-208ENST00000458572 MYO15BQ96JP2 1530 aa16.97■□□□□ 0.31
EIF3D-208ENST00000458572 UNC13AQ9UPW8 1703 aa16.68■□□□□ 0.26
EIF3D-208ENST00000458572 SCRIBQ14160 1630 aa16.63■□□□□ 0.25
EIF3D-208ENST00000458572 BICRAQ9NZM4 1560 aa16.52■□□□□ 0.24
EIF3D-208ENST00000458572 PABPN1Q86U42 306 aaKnown RBP eCLIP16.5■□□□□ 0.23
EIF3D-208ENST00000458572 SHROOM4Q9ULL8 1493 aa16.38■□□□□ 0.21
EIF3D-208ENST00000458572 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
EIF3D-208ENST00000458572 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.16
EIF3D-208ENST00000458572 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
EIF3D-208ENST00000458572 CC2D2AQ9P2K1 1620 aa15.95■□□□□ 0.14
EIF3D-208ENST00000458572 SMARCA4P51532 1647 aa15.9■□□□□ 0.14
EIF3D-208ENST00000458572 BAZ1AQ9NRL2 1556 aaPredicted RBP15.9■□□□□ 0.14
EIF3D-208ENST00000458572 MROH2BQ7Z745 1585 aa15.86■□□□□ 0.13
EIF3D-208ENST00000458572 ATAD2BQ9ULI0 1458 aa15.76■□□□□ 0.11
EIF3D-208ENST00000458572 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
EIF3D-208ENST00000458572 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
EIF3D-208ENST00000458572 PEG3Q9GZU2 1588 aa15.73■□□□□ 0.11
EIF3D-208ENST00000458572 NCAPD3P42695 1498 aa15.71■□□□□ 0.11
EIF3D-208ENST00000458572 WIZO95785 1651 aa15.71■□□□□ 0.11
EIF3D-208ENST00000458572 HMGXB3Q12766 1538 aa15.65■□□□□ 0.1
EIF3D-208ENST00000458572 BAZ1BQ9UIG0 1483 aaKnown RBP15.64■□□□□ 0.09
EIF3D-208ENST00000458572 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
EIF3D-208ENST00000458572 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
EIF3D-208ENST00000458572 CCDC88BA6NC98 1476 aa15.35■□□□□ 0.05
EIF3D-208ENST00000458572 NESP48681 1621 aa15.32■□□□□ 0.04
EIF3D-208ENST00000458572 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.04
EIF3D-208ENST00000458572 LAMC3Q9Y6N6 1575 aa15.27■□□□□ 0.03
EIF3D-208ENST00000458572 CFTRP13569 1480 aa15.22■□□□□ 0.03
EIF3D-208ENST00000458572 PRDM2Q13029 1718 aa15.15■□□□□ 0.02
EIF3D-208ENST00000458572 PDS5BQ9NTI5 1447 aa15.15■□□□□ 0.02
EIF3D-208ENST00000458572 KIF21AQ7Z4S6 1674 aa15.15■□□□□ 0.02
EIF3D-208ENST00000458572 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
EIF3D-208ENST00000458572 FANCD2Q9BXW9 1451 aa15.1■□□□□ 0.01
EIF3D-208ENST00000458572 CEP164Q9UPV0 1460 aa15.05■□□□□ -0
EIF3D-208ENST00000458572 THOC2Q8NI27 1593 aaKnown RBP15.03■□□□□ -0
EIF3D-208ENST00000458572 MRC2Q9UBG0 1479 aa15□□□□□ -0.01
EIF3D-208ENST00000458572 URB2Q14146 1524 aaKnown RBP14.95□□□□□ -0.02
EIF3D-208ENST00000458572 WDR62O43379 1518 aa14.94□□□□□ -0.02
EIF3D-208ENST00000458572 CUX2O14529 1486 aa14.9□□□□□ -0.02
EIF3D-208ENST00000458572 TOPBP1Q92547 1522 aa14.89□□□□□ -0.03
EIF3D-208ENST00000458572 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
EIF3D-208ENST00000458572 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
EIF3D-208ENST00000458572 CUX1P39880 1505 aa14.86□□□□□ -0.03
EIF3D-208ENST00000458572 WRNQ14191 1432 aaPredicted RBP eCLIP14.82□□□□□ -0.04
EIF3D-208ENST00000458572 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
EIF3D-208ENST00000458572 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.04
EIF3D-208ENST00000458572 POLA1P09884 1462 aaPredicted RBP14.77□□□□□ -0.04
EIF3D-208ENST00000458572 FGD5Q6ZNL6 1462 aa14.77□□□□□ -0.04
EIF3D-208ENST00000458572 TOP2BQ02880 1626 aa14.77□□□□□ -0.05
EIF3D-208ENST00000458572 IFT140Q96RY7 1462 aa14.72□□□□□ -0.05
EIF3D-208ENST00000458572 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
EIF3D-208ENST00000458572 TARBP1Q13395 1621 aaKnown RBP14.72□□□□□ -0.05
EIF3D-208ENST00000458572 SOGA1O94964 1423 aa14.71□□□□□ -0.05
EIF3D-208ENST00000458572 ZNF608Q9ULD9 1512 aaPredicted RBP14.68□□□□□ -0.06
EIF3D-208ENST00000458572 WDR97A6NE52 1622 aa14.65□□□□□ -0.06
EIF3D-208ENST00000458572 ABCA10Q8WWZ4 1543 aa14.62□□□□□ -0.07
EIF3D-208ENST00000458572 EIF4G3O43432 1585 aaKnown RBP14.62□□□□□ -0.07
EIF3D-208ENST00000458572 AQRO60306 1485 aaKnown RBP eCLIP14.62□□□□□ -0.076e-7■■■■■ 30.5
EIF3D-208ENST00000458572 TDRD9Q8NDG6 1382 aaKnown RBP14.61□□□□□ -0.07
EIF3D-208ENST00000458572 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
EIF3D-208ENST00000458572 CHIC1Q5VXU3 224 aa14.57□□□□□ -0.08
EIF3D-208ENST00000458572 ABCA5Q8WWZ7 1642 aa14.56□□□□□ -0.08
EIF3D-208ENST00000458572 GAPVD1Q14C86 1478 aa14.54□□□□□ -0.08
EIF3D-208ENST00000458572 PBRM1Q86U86 1689 aa14.52□□□□□ -0.08
EIF3D-208ENST00000458572 GRIN2BQ13224 1484 aa14.5□□□□□ -0.09
EIF3D-208ENST00000458572 KIF27Q86VH2 1401 aa14.48□□□□□ -0.09
EIF3D-208ENST00000458572 SNAPC4Q5SXM2 1469 aa14.47□□□□□ -0.09
EIF3D-208ENST00000458572 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.09
EIF3D-208ENST00000458572 ERICH3Q5RHP9 1530 aa14.45□□□□□ -0.1
EIF3D-208ENST00000458572 MAGI1Q96QZ7 1491 aaPredicted RBP14.44□□□□□ -0.1
EIF3D-208ENST00000458572 CHD1O14646 1710 aa14.42□□□□□ -0.1
EIF3D-208ENST00000458572 IGF1RP08069 1367 aa14.42□□□□□ -0.1
EIF3D-208ENST00000458572 ADAMTS12P58397 1594 aa14.4□□□□□ -0.1
EIF3D-208ENST00000458572 SYNJ2O15056 1496 aa14.39□□□□□ -0.11
EIF3D-208ENST00000458572 FBLN2P98095 1184 aa14.39□□□□□ -0.11
EIF3D-208ENST00000458572 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
EIF3D-208ENST00000458572 FHAD1B1AJZ9 1412 aa14.37□□□□□ -0.11
EIF3D-208ENST00000458572 CUL7Q14999 1698 aa14.36□□□□□ -0.11
EIF3D-208ENST00000458572 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
EIF3D-208ENST00000458572 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.12
EIF3D-208ENST00000458572 CARMIL1Q5VZK9 1371 aa14.33□□□□□ -0.12
EIF3D-208ENST00000458572 GRIN2AQ12879 1464 aa14.32□□□□□ -0.12
EIF3D-208ENST00000458572 EEA1Q15075 1411 aa14.32□□□□□ -0.12
EIF3D-208ENST00000458572 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
EIF3D-208ENST00000458572 CEP170Q5SW79 1584 aa14.26□□□□□ -0.13
EIF3D-208ENST00000458572 PRXQ9BXM0 1461 aa14.26□□□□□ -0.13
EIF3D-208ENST00000458572 RAPGEF2Q9Y4G8 1499 aa14.26□□□□□ -0.13
EIF3D-208ENST00000458572 NUP160Q12769 1436 aa14.25□□□□□ -0.13
EIF3D-208ENST00000458572 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
EIF3D-208ENST00000458572 CLASP1Q7Z460 1538 aa14.24□□□□□ -0.13
EIF3D-208ENST00000458572 KIF21BO75037 1637 aa14.19□□□□□ -0.14
EIF3D-208ENST00000458572 KIAA0586Q9BVV6 1533 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms