RNA–Protein interactions for RNA: ENST00000309902.10

ZNF407-202, Transcript of zinc finger protein 407, humanhuman

TSL 2 BASIC

Gene ZNF407, Length 5,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407-202ENST00000309902 NISCHQ9Y2I1 1504 aa13.53□□□□□ -0.24
ZNF407-202ENST00000309902 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
ZNF407-202ENST00000309902 SUPT5HO00267 1087 aaKnown RBP12□□□□□ -0.49
ZNF407-202ENST00000309902 SHROOM4Q9ULL8 1493 aa11.99□□□□□ -0.49
ZNF407-202ENST00000309902 FAM9AQ8IZU1 332 aaPredicted RBP11.75□□□□□ -0.53
ZNF407-202ENST00000309902 CCDC180Q9P1Z9 1646 aa11.59□□□□□ -0.55
ZNF407-202ENST00000309902 APLP2Q06481 763 aa11.53□□□□□ -0.56
ZNF407-202ENST00000309902 EHMT2Q96KQ7 1210 aa11.52□□□□□ -0.56
ZNF407-202ENST00000309902 ABCC9O60706 1549 aa11.52□□□□□ -0.56
ZNF407-202ENST00000309902 TRIM41Q8WV44 630 aa11.37□□□□□ -0.59
ZNF407-202ENST00000309902 PCGF6Q9BYE7 350 aa11.31□□□□□ -0.6
ZNF407-202ENST00000309902 ZCCHC6Q5VYS8 1495 aaKnown RBP11.24□□□□□ -0.61
ZNF407-202ENST00000309902 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
ZNF407-202ENST00000309902 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
ZNF407-202ENST00000309902 TTBK1Q5TCY1 1321 aaPredicted RBP11.16□□□□□ -0.62
ZNF407-202ENST00000309902 UBTFP17480 764 aaKnown RBP11.15□□□□□ -0.63
ZNF407-202ENST00000309902 PABPN1Q86U42 306 aaKnown RBP eCLIP11.15□□□□□ -0.63
ZNF407-202ENST00000309902 NACADO15069 1562 aa11.14□□□□□ -0.63
ZNF407-202ENST00000309902 HRCP23327 699 aa11.07□□□□□ -0.64
ZNF407-202ENST00000309902 SCRIBQ14160 1630 aa11.05□□□□□ -0.64
ZNF407-202ENST00000309902 ATP1B4Q9UN42 357 aaPredicted RBP11.04□□□□□ -0.64
ZNF407-202ENST00000309902 PPARGC1BQ86YN6 1023 aaKnown RBP11.03□□□□□ -0.64
ZNF407-202ENST00000309902 DCAF1Q9Y4B6 1507 aa11.01□□□□□ -0.65
ZNF407-202ENST00000309902 YTHDC1Q96MU7 727 aaKnown RBP10.98□□□□□ -0.65
ZNF407-202ENST00000309902 ZEB1P37275 1124 aaPredicted RBP10.98□□□□□ -0.65
ZNF407-202ENST00000309902 RANGAP1P46060 587 aaPredicted RBP10.98□□□□□ -0.65
ZNF407-202ENST00000309902 CENPBP07199 599 aaPredicted RBP10.89□□□□□ -0.67
ZNF407-202ENST00000309902 CHIC1Q5VXU3 224 aa10.85□□□□□ -0.67
ZNF407-202ENST00000309902 ERICH6Q7L0X2 663 aa10.84□□□□□ -0.67
ZNF407-202ENST00000309902 MYT1Q01538 1121 aa10.84□□□□□ -0.67
ZNF407-202ENST00000309902 CCER1Q8TC90 406 aaPredicted RBP10.84□□□□□ -0.67
ZNF407-202ENST00000309902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
ZNF407-202ENST00000309902 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
ZNF407-202ENST00000309902 MYO15BQ96JP2 1530 aa10.83□□□□□ -0.68
ZNF407-202ENST00000309902 MYT1LQ9UL68 1186 aa10.75□□□□□ -0.69
ZNF407-202ENST00000309902 TRIM26Q12899 539 aaPredicted RBP10.71□□□□□ -0.69
ZNF407-202ENST00000309902 BAZ1AQ9NRL2 1556 aaPredicted RBP10.71□□□□□ -0.7
ZNF407-202ENST00000309902 BAZ1BQ9UIG0 1483 aaKnown RBP10.69□□□□□ -0.7
ZNF407-202ENST00000309902 SCAF1Q9H7N4 1312 aaKnown RBP10.65□□□□□ -0.7
ZNF407-202ENST00000309902 FBLN2P98095 1184 aa10.63□□□□□ -0.71
ZNF407-202ENST00000309902 CSRNP3Q8WYN3 585 aa10.62□□□□□ -0.71
ZNF407-202ENST00000309902 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
ZNF407-202ENST00000309902 LOC105371045A0A1W2PR82 267 aa10.6□□□□□ -0.71
ZNF407-202ENST00000309902 SMARCA2P51531 1590 aa10.59□□□□□ -0.71
ZNF407-202ENST00000309902 RSF1Q96T23 1441 aaPredicted RBP10.59□□□□□ -0.71
ZNF407-202ENST00000309902 EEA1Q15075 1411 aa10.57□□□□□ -0.72
ZNF407-202ENST00000309902 NEFLP07196 543 aa10.51□□□□□ -0.73
ZNF407-202ENST00000309902 ITGAEP38570 1179 aa10.51□□□□□ -0.73
ZNF407-202ENST00000309902 NPM1P06748 294 aaKnown RBP eCLIP10.51□□□□□ -0.73
ZNF407-202ENST00000309902 ERCC6Q03468 1493 aa10.5□□□□□ -0.73
ZNF407-202ENST00000309902 FAM50AQ14320 339 aaKnown RBP10.5□□□□□ -0.73
ZNF407-202ENST00000309902 GTF3C3Q9Y5Q9 886 aa10.45□□□□□ -0.74
ZNF407-202ENST00000309902 CHMP7Q8WUX9 453 aaPredicted RBP10.45□□□□□ -0.74
ZNF407-202ENST00000309902 WRNQ14191 1432 aaPredicted RBP eCLIP10.45□□□□□ -0.74
ZNF407-202ENST00000309902 PDS5BQ9NTI5 1447 aa10.43□□□□□ -0.74
ZNF407-202ENST00000309902 ACIN1Q9UKV3 1341 aaKnown RBP10.43□□□□□ -0.74
ZNF407-202ENST00000309902 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
ZNF407-202ENST00000309902 TRIM52Q96A61 297 aa10.42□□□□□ -0.74
ZNF407-202ENST00000309902 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
ZNF407-202ENST00000309902 TOP2AP11388 1531 aaKnown RBP10.38□□□□□ -0.75
ZNF407-202ENST00000309902 GOLGA3Q08378 1498 aa10.38□□□□□ -0.75
ZNF407-202ENST00000309902 BCANQ96GW7 911 aa10.38□□□□□ -0.75
ZNF407-202ENST00000309902 CECR2Q9BXF3 1484 aa10.37□□□□□ -0.75
ZNF407-202ENST00000309902 CNGB1Q14028 1251 aaPredicted RBP10.36□□□□□ -0.75
ZNF407-202ENST00000309902 NEUROD1Q13562 356 aa10.34□□□□□ -0.75
ZNF407-202ENST00000309902 P3H3Q8IVL6 736 aa10.34□□□□□ -0.75
ZNF407-202ENST00000309902 ESF1Q9H501 851 aaKnown RBP10.34□□□□□ -0.75
ZNF407-202ENST00000309902 CEP164Q9UPV0 1460 aa10.34□□□□□ -0.75
ZNF407-202ENST00000309902 MROH2BQ7Z745 1585 aa10.32□□□□□ -0.76
ZNF407-202ENST00000309902 SMARCA4P51532 1647 aa10.32□□□□□ -0.76
ZNF407-202ENST00000309902 ABCC8Q09428 1581 aa10.29□□□□□ -0.76
ZNF407-202ENST00000309902 CLIP1P30622 1438 aa10.28□□□□□ -0.76
ZNF407-202ENST00000309902 CCDC88BA6NC98 1476 aa10.28□□□□□ -0.76
ZNF407-202ENST00000309902 ATAD2BQ9ULI0 1458 aa10.27□□□□□ -0.76
ZNF407-202ENST00000309902 ZNF777Q9ULD5 760 aaPredicted RBP10.27□□□□□ -0.77
ZNF407-202ENST00000309902 POLR3GLQ9BT43 218 aa10.27□□□□□ -0.77
ZNF407-202ENST00000309902 MTUS2Q5JR59 1369 aa10.26□□□□□ -0.77
ZNF407-202ENST00000309902 CADPSQ9ULU8 1353 aa10.26□□□□□ -0.77
ZNF407-202ENST00000309902 TNIKQ9UKE5 1360 aa10.23□□□□□ -0.77
ZNF407-202ENST00000309902 PLEKHD1A6NEE1 506 aa10.23□□□□□ -0.77
ZNF407-202ENST00000309902 TSPY4P0CV99 314 aa10.22□□□□□ -0.77
ZNF407-202ENST00000309902 TSPY10P0CW01 314 aa10.22□□□□□ -0.77
ZNF407-202ENST00000309902 SLC4A1APQ9BWU0 796 aaKnown RBP10.22□□□□□ -0.77
ZNF407-202ENST00000309902 FHAD1B1AJZ9 1412 aa10.21□□□□□ -0.77
ZNF407-202ENST00000309902 CUX2O14529 1486 aa10.21□□□□□ -0.78
ZNF407-202ENST00000309902 ARID3CA6NKF2 412 aa10.2□□□□□ -0.78
ZNF407-202ENST00000309902 CARMIL2Q6F5E8 1435 aa10.19□□□□□ -0.78
ZNF407-202ENST00000309902 WIZO95785 1651 aa10.19□□□□□ -0.78
ZNF407-202ENST00000309902 CARMIL1Q5VZK9 1371 aa10.18□□□□□ -0.78
ZNF407-202ENST00000309902 SOGA1O94964 1423 aa10.18□□□□□ -0.78
ZNF407-202ENST00000309902 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
ZNF407-202ENST00000309902 NCAPD3P42695 1498 aa10.17□□□□□ -0.78
ZNF407-202ENST00000309902 CEP162Q5TB80 1403 aa10.16□□□□□ -0.78
ZNF407-202ENST00000309902 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
ZNF407-202ENST00000309902 BCL11AQ9H165 835 aa10.15□□□□□ -0.78
ZNF407-202ENST00000309902 EIF4G1Q04637 1599 aaKnown RBP10.14□□□□□ -0.79
ZNF407-202ENST00000309902 RTL5Q5HYW3 569 aaPredicted RBP10.14□□□□□ -0.79
ZNF407-202ENST00000309902 FANCD2Q9BXW9 1451 aa10.11□□□□□ -0.79
ZNF407-202ENST00000309902 TONSLQ96HA7 1378 aa10.11□□□□□ -0.79
ZNF407-202ENST00000309902 ZNF326Q5BKZ1 582 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms