RNA–Protein interactions for RNA: ENST00000378593.6

AFF4-202, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 5

Gene AFF4, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-202ENST00000378593 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
AFF4-202ENST00000378593 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
AFF4-202ENST00000378593 SENP3Q9H4L4 574 aaPredicted RBP18.41■□□□□ 0.54
AFF4-202ENST00000378593 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
AFF4-202ENST00000378593 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
AFF4-202ENST00000378593 FOXD1Q16676 465 aa17.31■□□□□ 0.36
AFF4-202ENST00000378593 MSH5O43196 834 aa16.56■□□□□ 0.24
AFF4-202ENST00000378593 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
AFF4-202ENST00000378593 PIAS4Q8N2W9 510 aaPredicted RBP15.91■□□□□ 0.14
AFF4-202ENST00000378593 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
AFF4-202ENST00000378593 ADRA2BP18089 450 aa15.29■□□□□ 0.04
AFF4-202ENST00000378593 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
AFF4-202ENST00000378593 KCNA4P22459 653 aa14.67□□□□□ -0.06
AFF4-202ENST00000378593 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
AFF4-202ENST00000378593 DMRT2Q9Y5R5 561 aa14.45□□□□□ -0.1
AFF4-202ENST00000378593 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
AFF4-202ENST00000378593 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
AFF4-202ENST00000378593 SLC4A1APQ9BWU0 796 aaKnown RBP14.09□□□□□ -0.15
AFF4-202ENST00000378593 RNF39Q9H2S5 420 aa14.06□□□□□ -0.16
AFF4-202ENST00000378593 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
AFF4-202ENST00000378593 CSRNP3Q8WYN3 585 aa14.04□□□□□ -0.16
AFF4-202ENST00000378593 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
AFF4-202ENST00000378593 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
AFF4-202ENST00000378593 POTEHQ6S545 545 aa13.86□□□□□ -0.19
AFF4-202ENST00000378593 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
AFF4-202ENST00000378593 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
AFF4-202ENST00000378593 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
AFF4-202ENST00000378593 ZBTB22O15209 634 aa13.51□□□□□ -0.25
AFF4-202ENST00000378593 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
AFF4-202ENST00000378593 DNAJC5BQ9UF47 199 aa13.42□□□□□ -0.26
AFF4-202ENST00000378593 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
AFF4-202ENST00000378593 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
AFF4-202ENST00000378593 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
AFF4-202ENST00000378593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.351e-6■■■□□ 15.9
AFF4-202ENST00000378593 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
AFF4-202ENST00000378593 DSG3P32926 999 aa12.82□□□□□ -0.36
AFF4-202ENST00000378593 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
AFF4-202ENST00000378593 AMER1Q5JTC6 1135 aaPredicted RBP12.74□□□□□ -0.37
AFF4-202ENST00000378593 RTN4Q9NQC3 1192 aaKnown RBP12.72□□□□□ -0.37
AFF4-202ENST00000378593 CAPN15O75808 1086 aa12.64□□□□□ -0.39
AFF4-202ENST00000378593 SLC24A1O60721 1099 aa12.63□□□□□ -0.39
AFF4-202ENST00000378593 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
AFF4-202ENST00000378593 FKBP8Q14318 412 aa12.6□□□□□ -0.39
AFF4-202ENST00000378593 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
AFF4-202ENST00000378593 U3KPZ7 1027 aaPredicted RBP12.49□□□□□ -0.41
AFF4-202ENST00000378593 CHRDL2Q6WN34 429 aa12.4□□□□□ -0.42
AFF4-202ENST00000378593 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
AFF4-202ENST00000378593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.34□□□□□ -0.43
AFF4-202ENST00000378593 HNRNPUL2Q1KMD3 747 aaKnown RBP12.34□□□□□ -0.43
AFF4-202ENST00000378593 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
AFF4-202ENST00000378593 ABCB7O75027 752 aa12.27□□□□□ -0.45
AFF4-202ENST00000378593 RBM42Q9BTD8 480 aaKnown RBP12.23□□□□□ -0.45
AFF4-202ENST00000378593 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
AFF4-202ENST00000378593 ZNF219Q9P2Y4 722 aaPredicted RBP12.11□□□□□ -0.47
AFF4-202ENST00000378593 APLP2Q06481 763 aa12.03□□□□□ -0.48
AFF4-202ENST00000378593 FBXO3Q9UK99 471 aa12□□□□□ -0.49
AFF4-202ENST00000378593 HAX1O00165 279 aa11.95□□□□□ -0.5
AFF4-202ENST00000378593 SPDYE4A6NLX3 237 aa11.94□□□□□ -0.5
AFF4-202ENST00000378593 PROM2Q8N271 834 aa11.9□□□□□ -0.5
AFF4-202ENST00000378593 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
AFF4-202ENST00000378593 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
AFF4-202ENST00000378593 PLSCR2Q9NRY7 297 aa11.85□□□□□ -0.51
AFF4-202ENST00000378593 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
AFF4-202ENST00000378593 FBLN2P98095 1184 aa11.79□□□□□ -0.52
AFF4-202ENST00000378593 EVX2Q03828 476 aa11.75□□□□□ -0.53
AFF4-202ENST00000378593 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
AFF4-202ENST00000378593 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
AFF4-202ENST00000378593 LHX8Q68G74 356 aa11.72□□□□□ -0.53
AFF4-202ENST00000378593 POLA2Q14181 598 aa11.7□□□□□ -0.54
AFF4-202ENST00000378593 IFNLR1Q8IU57 520 aaPredicted RBP11.7□□□□□ -0.54
AFF4-202ENST00000378593 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
AFF4-202ENST00000378593 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
AFF4-202ENST00000378593 PKD2Q13563 968 aa11.59□□□□□ -0.55
AFF4-202ENST00000378593 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
AFF4-202ENST00000378593 PITPNM1O00562 1244 aa11.54□□□□□ -0.56
AFF4-202ENST00000378593 DCAF8L2P0C7V8 631 aa11.53□□□□□ -0.56
AFF4-202ENST00000378593 HAP1P54257 671 aaPredicted RBP11.53□□□□□ -0.56
AFF4-202ENST00000378593 VSIG10Q8N0Z9 540 aa11.45□□□□□ -0.58
AFF4-202ENST00000378593 SPOCK2Q92563 424 aa11.44□□□□□ -0.58
AFF4-202ENST00000378593 GABBR2O75899 941 aa11.41□□□□□ -0.58
AFF4-202ENST00000378593 STAG3Q9UJ98 1225 aa11.41□□□□□ -0.58
AFF4-202ENST00000378593 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
AFF4-202ENST00000378593 BCANQ96GW7 911 aa11.4□□□□□ -0.58
AFF4-202ENST00000378593 BBXQ8WY36 941 aaPredicted RBP11.38□□□□□ -0.59
AFF4-202ENST00000378593 ZNF692Q9BU19 519 aaPredicted RBP11.37□□□□□ -0.59
AFF4-202ENST00000378593 ECM2O94769 699 aaPredicted RBP11.35□□□□□ -0.59
AFF4-202ENST00000378593 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.35□□□□□ -0.59
AFF4-202ENST00000378593 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
AFF4-202ENST00000378593 SPDYE2BA6NHP3 402 aa11.31□□□□□ -0.6
AFF4-202ENST00000378593 SPDYE6P0CI01 402 aa11.31□□□□□ -0.6
AFF4-202ENST00000378593 SPDYE2Q495Y8 402 aa11.31□□□□□ -0.6
AFF4-202ENST00000378593 OSCARQ8IYS5 282 aa11.31□□□□□ -0.6
AFF4-202ENST00000378593 SSUH2Q9Y2M2 353 aa11.31□□□□□ -0.6
AFF4-202ENST00000378593 NPM1P06748 294 aaKnown RBP eCLIP11.3□□□□□ -0.6
AFF4-202ENST00000378593 PLCD3Q8N3E9 789 aa11.29□□□□□ -0.6
AFF4-202ENST00000378593 PAXIP1Q6ZW49 1069 aaPredicted RBP11.25□□□□□ -0.61
AFF4-202ENST00000378593 KDM2AQ9Y2K7 1162 aa11.25□□□□□ -0.61
AFF4-202ENST00000378593 MIER1Q8N108 512 aa11.24□□□□□ -0.61
AFF4-202ENST00000378593 RGL2O15211 777 aa11.23□□□□□ -0.61
AFF4-202ENST00000378593 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms