RNA–Protein interactions for RNA: ENST00000561205.1

SPRED1-202, Transcript of sprouty related EVH1 domain containing 1, humanhuman

TSL 5

Gene SPRED1, Length 1,177 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-202ENST00000561205 NISCHQ9Y2I1 1504 aa52.4■■■■■ 5.98
SPRED1-202ENST00000561205 CCDC180Q9P1Z9 1646 aa46.69■■■■■ 5.07
SPRED1-202ENST00000561205 ABCC9O60706 1549 aa45.4■■■■■ 4.86
SPRED1-202ENST00000561205 RB1CC1Q8TDY2 1594 aa43.82■■■■■ 4.61
SPRED1-202ENST00000561205 NACADO15069 1562 aa43.81■■■■■ 4.6
SPRED1-202ENST00000561205 ZCCHC6Q5VYS8 1495 aaKnown RBP43.69■■■■■ 4.58
SPRED1-202ENST00000561205 MYO15BQ96JP2 1530 aa43.66■■■■■ 4.58
SPRED1-202ENST00000561205 DCAF1Q9Y4B6 1507 aa43.47■■■■■ 4.55
SPRED1-202ENST00000561205 DCAF8L2P0C7V8 631 aa43.38■■■■■ 4.53
SPRED1-202ENST00000561205 UNC13AQ9UPW8 1703 aa42.94■■■■■ 4.46
SPRED1-202ENST00000561205 BICRAQ9NZM4 1560 aa42.56■■■■■ 4.4
SPRED1-202ENST00000561205 SCRIBQ14160 1630 aa42.41■■■■■ 4.38
SPRED1-202ENST00000561205 PABPN1Q86U42 306 aaKnown RBP eCLIP42.32■■■■■ 4.37
SPRED1-202ENST00000561205 SHROOM4Q9ULL8 1493 aa42.18■■■■■ 4.34
SPRED1-202ENST00000561205 DNAJC5BQ9UF47 199 aa41.63■■■■■ 4.25
SPRED1-202ENST00000561205 EIF4G1Q04637 1599 aaKnown RBP41.37■■■■■ 4.21
SPRED1-202ENST00000561205 CC2D2AQ9P2K1 1620 aa41.18■■■■■ 4.18
SPRED1-202ENST00000561205 CECR2Q9BXF3 1484 aa40.83■■■■■ 4.13
SPRED1-202ENST00000561205 SMARCA4P51532 1647 aa40.67■■■■■ 4.1
SPRED1-202ENST00000561205 BAZ1AQ9NRL2 1556 aaPredicted RBP40.61■■■■■ 4.09
SPRED1-202ENST00000561205 NCAPD3P42695 1498 aa40.41■■■■■ 4.06
SPRED1-202ENST00000561205 ATAD2BQ9ULI0 1458 aa40.39■■■■■ 4.06
SPRED1-202ENST00000561205 SMARCA2P51531 1590 aa40.38■■■■■ 4.05
SPRED1-202ENST00000561205 PEG3Q9GZU2 1588 aa40.36■■■■■ 4.05
SPRED1-202ENST00000561205 MROH2BQ7Z745 1585 aa40.35■■■■■ 4.05
SPRED1-202ENST00000561205 HMGXB3Q12766 1538 aa40.26■■■■■ 4.04
SPRED1-202ENST00000561205 BAZ1BQ9UIG0 1483 aaKnown RBP40.02■■■■■ 4
SPRED1-202ENST00000561205 WIZO95785 1651 aa39.92■■■■□ 3.98
SPRED1-202ENST00000561205 RSF1Q96T23 1441 aaPredicted RBP39.88■■■■□ 3.97
SPRED1-202ENST00000561205 TOP2AP11388 1531 aaKnown RBP39.54■■■■□ 3.92
SPRED1-202ENST00000561205 LAMC3Q9Y6N6 1575 aa39.36■■■■□ 3.89
SPRED1-202ENST00000561205 NESP48681 1621 aa39.33■■■■□ 3.89
SPRED1-202ENST00000561205 CADPSQ9ULU8 1353 aa39.16■■■■□ 3.86
SPRED1-202ENST00000561205 ERCC6Q03468 1493 aa39.11■■■■□ 3.85
SPRED1-202ENST00000561205 CCDC88BA6NC98 1476 aa38.99■■■■□ 3.83
SPRED1-202ENST00000561205 CFTRP13569 1480 aa38.99■■■■□ 3.83
SPRED1-202ENST00000561205 PDS5BQ9NTI5 1447 aa38.98■■■■□ 3.83
SPRED1-202ENST00000561205 KIF21AQ7Z4S6 1674 aa38.97■■■■□ 3.83
SPRED1-202ENST00000561205 THOC2Q8NI27 1593 aaKnown RBP38.87■■■■□ 3.81
SPRED1-202ENST00000561205 PRDM2Q13029 1718 aa38.83■■■■□ 3.81
SPRED1-202ENST00000561205 CUX2O14529 1486 aa38.83■■■■□ 3.81
SPRED1-202ENST00000561205 FANCD2Q9BXW9 1451 aa38.71■■■■□ 3.79
SPRED1-202ENST00000561205 CEP164Q9UPV0 1460 aa38.66■■■■□ 3.78
SPRED1-202ENST00000561205 SUPT5HO00267 1087 aaKnown RBP38.63■■■■□ 3.77
SPRED1-202ENST00000561205 MRC2Q9UBG0 1479 aa38.62■■■■□ 3.77
SPRED1-202ENST00000561205 WDR62O43379 1518 aa38.57■■■■□ 3.76
SPRED1-202ENST00000561205 URB2Q14146 1524 aaKnown RBP38.36■■■■□ 3.73
SPRED1-202ENST00000561205 ABCC8Q09428 1581 aa38.14■■■■□ 3.7
SPRED1-202ENST00000561205 TOPBP1Q92547 1522 aa38.12■■■■□ 3.69
SPRED1-202ENST00000561205 DNMBPQ6XZF7 1577 aa38.12■■■■□ 3.69
SPRED1-202ENST00000561205 IFT140Q96RY7 1462 aa37.87■■■■□ 3.65
SPRED1-202ENST00000561205 CUX1P39880 1505 aa37.86■■■■□ 3.65
SPRED1-202ENST00000561205 POLA1P09884 1462 aaPredicted RBP37.81■■■■□ 3.64
SPRED1-202ENST00000561205 TARBP1Q13395 1621 aaKnown RBP37.79■■■■□ 3.64
SPRED1-202ENST00000561205 FGD5Q6ZNL6 1462 aa37.69■■■■□ 3.62
SPRED1-202ENST00000561205 ZNF608Q9ULD9 1512 aaPredicted RBP37.66■■■■□ 3.62
SPRED1-202ENST00000561205 DNAJC5Q9H3Z4 198 aa37.63■■■■□ 3.61
SPRED1-202ENST00000561205 BIVM-ERCC5R4GMW8 1640 aa37.62■■■■□ 3.61
SPRED1-202ENST00000561205 EIF4G3O43432 1585 aaKnown RBP37.59■■■■□ 3.61
SPRED1-202ENST00000561205 TOP2BQ02880 1626 aa37.58■■■■□ 3.61
SPRED1-202ENST00000561205 SOGA1O94964 1423 aa37.57■■■■□ 3.6
SPRED1-202ENST00000561205 WRNQ14191 1432 aaPredicted RBP eCLIP37.57■■■■□ 3.6
SPRED1-202ENST00000561205 RAD54L2Q9Y4B4 1467 aa37.57■■■■□ 3.6
SPRED1-202ENST00000561205 WDR97A6NE52 1622 aa37.54■■■■□ 3.6
SPRED1-202ENST00000561205 SYNJ1O43426 1573 aa37.54■■■■□ 3.6
SPRED1-202ENST00000561205 AQRO60306 1485 aaKnown RBP eCLIP37.41■■■■□ 3.58
SPRED1-202ENST00000561205 ABCA10Q8WWZ4 1543 aa37.38■■■■□ 3.57
SPRED1-202ENST00000561205 TDRD9Q8NDG6 1382 aaKnown RBP37.31■■■■□ 3.56
SPRED1-202ENST00000561205 ABCA5Q8WWZ7 1642 aa37.28■■■■□ 3.56
SPRED1-202ENST00000561205 PBRM1Q86U86 1689 aa37.19■■■■□ 3.54
SPRED1-202ENST00000561205 GRIN2BQ13224 1484 aa37.19■■■■□ 3.54
SPRED1-202ENST00000561205 GAPVD1Q14C86 1478 aa37.18■■■■□ 3.54
SPRED1-202ENST00000561205 MAGI1Q96QZ7 1491 aaPredicted RBP37.13■■■■□ 3.53
SPRED1-202ENST00000561205 CHD1O14646 1710 aa37.12■■■■□ 3.53
SPRED1-202ENST00000561205 SNAPC4Q5SXM2 1469 aa37.11■■■■□ 3.53
SPRED1-202ENST00000561205 OSCARQ8IYS5 282 aa37.06■■■■□ 3.52
SPRED1-202ENST00000561205 SYNJ2O15056 1496 aa36.96■■■■□ 3.51
SPRED1-202ENST00000561205 ERICH3Q5RHP9 1530 aa36.95■■■■□ 3.51
SPRED1-202ENST00000561205 ADAMTS12P58397 1594 aa36.9■■■■□ 3.5
SPRED1-202ENST00000561205 FBLN2P98095 1184 aa36.78■■■■□ 3.48
SPRED1-202ENST00000561205 KIF27Q86VH2 1401 aa36.77■■■■□ 3.48
SPRED1-202ENST00000561205 CHMP7Q8WUX9 453 aaPredicted RBP36.77■■■■□ 3.48
SPRED1-202ENST00000561205 FHAD1B1AJZ9 1412 aa36.76■■■■□ 3.48
SPRED1-202ENST00000561205 CLASP1Q7Z460 1538 aa36.75■■■■□ 3.47
SPRED1-202ENST00000561205 GRIN2AQ12879 1464 aa36.73■■■■□ 3.47
SPRED1-202ENST00000561205 CUL7Q14999 1698 aa36.64■■■■□ 3.46
SPRED1-202ENST00000561205 IGF1RP08069 1367 aa36.63■■■■□ 3.45
SPRED1-202ENST00000561205 RIMBP3CA6NJZ7 1639 aa36.61■■■■□ 3.45
SPRED1-202ENST00000561205 RIMBP3BA6NNM3 1639 aa36.61■■■■□ 3.45
SPRED1-202ENST00000561205 RIMBP3Q9UFD9 1639 aa36.61■■■■□ 3.45
SPRED1-202ENST00000561205 NUP160Q12769 1436 aa36.6■■■■□ 3.45
SPRED1-202ENST00000561205 ARHGEF11O15085 1522 aa36.59■■■■□ 3.45
SPRED1-202ENST00000561205 CEP170Q5SW79 1584 aa36.57■■■■□ 3.44
SPRED1-202ENST00000561205 TRIM41Q8WV44 630 aa36.54■■■■□ 3.44
SPRED1-202ENST00000561205 RUSC2Q8N2Y8 1516 aa36.44■■■■□ 3.42
SPRED1-202ENST00000561205 SHROOM2Q13796 1616 aa36.39■■■■□ 3.42
SPRED1-202ENST00000561205 CARMIL1Q5VZK9 1371 aa36.38■■■■□ 3.41
SPRED1-202ENST00000561205 ARAP1Q96P48 1450 aa36.3■■■■□ 3.4
SPRED1-202ENST00000561205 KIAA0586Q9BVV6 1533 aa36.22■■■■□ 3.39
SPRED1-202ENST00000561205 RAPGEF2Q9Y4G8 1499 aa36.21■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms