RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 NISCHQ9Y2I1 1504 aa24.21■■□□□ 1.47
PCGF3-207ENST00000440452 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
PCGF3-207ENST00000440452 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
PCGF3-207ENST00000440452 DCAF8L2P0C7V8 631 aa21.52■■□□□ 1.04
PCGF3-207ENST00000440452 PCGF6Q9BYE7 350 aa20.44■□□□□ 0.86
PCGF3-207ENST00000440452 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
PCGF3-207ENST00000440452 HRCP23327 699 aa20.4■□□□□ 0.86
PCGF3-207ENST00000440452 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
PCGF3-207ENST00000440452 PPARGC1BQ86YN6 1023 aaKnown RBP20.37■□□□□ 0.85
PCGF3-207ENST00000440452 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
PCGF3-207ENST00000440452 LOC105371045A0A1W2PR82 267 aa20.21■□□□□ 0.83
PCGF3-207ENST00000440452 MYO15BQ96JP2 1530 aa20.18■□□□□ 0.82
PCGF3-207ENST00000440452 FAM9AQ8IZU1 332 aaPredicted RBP20.07■□□□□ 0.8
PCGF3-207ENST00000440452 CCDC180Q9P1Z9 1646 aa20.05■□□□□ 0.8
PCGF3-207ENST00000440452 PELP1Q8IZL8 1130 aaKnown RBP19.93■□□□□ 0.78
PCGF3-207ENST00000440452 TRIM41Q8WV44 630 aa19.78■□□□□ 0.76
PCGF3-207ENST00000440452 SCRIBQ14160 1630 aa19.58■□□□□ 0.72
PCGF3-207ENST00000440452 TTBK1Q5TCY1 1321 aaPredicted RBP19.57■□□□□ 0.72
PCGF3-207ENST00000440452 ABCC9O60706 1549 aa19.56■□□□□ 0.72
PCGF3-207ENST00000440452 TRIM26Q12899 539 aaPredicted RBP19.54■□□□□ 0.72
PCGF3-207ENST00000440452 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
PCGF3-207ENST00000440452 RSF1Q96T23 1441 aaPredicted RBP19.39■□□□□ 0.69
PCGF3-207ENST00000440452 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
PCGF3-207ENST00000440452 ZEB1P37275 1124 aaPredicted RBP19.22■□□□□ 0.67
PCGF3-207ENST00000440452 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
PCGF3-207ENST00000440452 RB1CC1Q8TDY2 1594 aa19.19■□□□□ 0.66
PCGF3-207ENST00000440452 MYT1Q01538 1121 aa19.17■□□□□ 0.66
PCGF3-207ENST00000440452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.13■□□□□ 0.65
PCGF3-207ENST00000440452 RANGAP1P46060 587 aaPredicted RBP19.1■□□□□ 0.65
PCGF3-207ENST00000440452 CCER1Q8TC90 406 aaPredicted RBP19.09■□□□□ 0.65
PCGF3-207ENST00000440452 GTF3C3Q9Y5Q9 886 aa19.08■□□□□ 0.65
PCGF3-207ENST00000440452 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
PCGF3-207ENST00000440452 CENPBP07199 599 aaPredicted RBP19.05■□□□□ 0.64
PCGF3-207ENST00000440452 YTHDC1Q96MU7 727 aaKnown RBP19.03■□□□□ 0.64
PCGF3-207ENST00000440452 UBTFP17480 764 aaKnown RBP19.02■□□□□ 0.63
PCGF3-207ENST00000440452 MROH2BQ7Z745 1585 aa19■□□□□ 0.63
PCGF3-207ENST00000440452 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
PCGF3-207ENST00000440452 ACIN1Q9UKV3 1341 aaKnown RBP18.98■□□□□ 0.63
PCGF3-207ENST00000440452 WIZO95785 1651 aa18.87■□□□□ 0.61
PCGF3-207ENST00000440452 NACADO15069 1562 aa18.8■□□□□ 0.6
PCGF3-207ENST00000440452 DIEXFQ68CQ4 756 aaKnown RBP18.79■□□□□ 0.6
PCGF3-207ENST00000440452 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
PCGF3-207ENST00000440452 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
PCGF3-207ENST00000440452 CSRNP3Q8WYN3 585 aa18.66■□□□□ 0.58
PCGF3-207ENST00000440452 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
PCGF3-207ENST00000440452 SOGA1O94964 1423 aa18.64■□□□□ 0.57
PCGF3-207ENST00000440452 APLP2Q06481 763 aa18.62■□□□□ 0.57
PCGF3-207ENST00000440452 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
PCGF3-207ENST00000440452 CEP162Q5TB80 1403 aa18.54■□□□□ 0.56
PCGF3-207ENST00000440452 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
PCGF3-207ENST00000440452 ITGAEP38570 1179 aa18.4■□□□□ 0.54
PCGF3-207ENST00000440452 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
PCGF3-207ENST00000440452 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
PCGF3-207ENST00000440452 WRNQ14191 1432 aaPredicted RBP eCLIP18.34■□□□□ 0.536e-6■■■■■ 35.2
PCGF3-207ENST00000440452 TNIKQ9UKE5 1360 aa18.33■□□□□ 0.53
PCGF3-207ENST00000440452 SMARCA2P51531 1590 aa18.32■□□□□ 0.52
PCGF3-207ENST00000440452 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
PCGF3-207ENST00000440452 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
PCGF3-207ENST00000440452 GOLGA3Q08378 1498 aa18.24■□□□□ 0.51
PCGF3-207ENST00000440452 CLIP1P30622 1438 aa18.23■□□□□ 0.51
PCGF3-207ENST00000440452 MIER1Q8N108 512 aa18.22■□□□□ 0.51
PCGF3-207ENST00000440452 BCANQ96GW7 911 aa18.15■□□□□ 0.5
PCGF3-207ENST00000440452 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.5
PCGF3-207ENST00000440452 EEA1Q15075 1411 aa18.14■□□□□ 0.49
PCGF3-207ENST00000440452 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
PCGF3-207ENST00000440452 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
PCGF3-207ENST00000440452 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
PCGF3-207ENST00000440452 P3H3Q8IVL6 736 aa18.09■□□□□ 0.49
PCGF3-207ENST00000440452 CEP164Q9UPV0 1460 aa18.09■□□□□ 0.49
PCGF3-207ENST00000440452 UNC13AQ9UPW8 1703 aa18.07■□□□□ 0.48
PCGF3-207ENST00000440452 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
PCGF3-207ENST00000440452 ATAD2BQ9ULI0 1458 aa18.04■□□□□ 0.48
PCGF3-207ENST00000440452 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
PCGF3-207ENST00000440452 BICRAQ9NZM4 1560 aa17.99■□□□□ 0.47
PCGF3-207ENST00000440452 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
PCGF3-207ENST00000440452 VPS8Q8N3P4 1428 aa17.98■□□□□ 0.47
PCGF3-207ENST00000440452 FAM50AQ14320 339 aaKnown RBP17.96■□□□□ 0.47
PCGF3-207ENST00000440452 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
PCGF3-207ENST00000440452 SUPT16HQ9Y5B9 1047 aaKnown RBP17.89■□□□□ 0.45
PCGF3-207ENST00000440452 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
PCGF3-207ENST00000440452 TSHZ2Q9NRE2 1034 aa17.81■□□□□ 0.44
PCGF3-207ENST00000440452 NEFLP07196 543 aa17.8■□□□□ 0.44
PCGF3-207ENST00000440452 KIF21BO75037 1637 aa17.8■□□□□ 0.44
PCGF3-207ENST00000440452 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
PCGF3-207ENST00000440452 FKBP8Q14318 412 aa17.74■□□□□ 0.43
PCGF3-207ENST00000440452 SIN3AQ96ST3 1273 aa17.73■□□□□ 0.43
PCGF3-207ENST00000440452 ARID3CA6NKF2 412 aa17.72■□□□□ 0.43
PCGF3-207ENST00000440452 DHX57Q6P158 1386 aaKnown RBP17.72■□□□□ 0.43
PCGF3-207ENST00000440452 CUX2O14529 1486 aa17.7■□□□□ 0.42
PCGF3-207ENST00000440452 ARAP1Q96P48 1450 aa17.7■□□□□ 0.42
PCGF3-207ENST00000440452 DDX10Q13206 875 aaKnown RBP17.7■□□□□ 0.42
PCGF3-207ENST00000440452 KCNH8Q96L42 1107 aa17.68■□□□□ 0.42
PCGF3-207ENST00000440452 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
PCGF3-207ENST00000440452 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
PCGF3-207ENST00000440452 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
PCGF3-207ENST00000440452 CUX1P39880 1505 aa17.62■□□□□ 0.41
PCGF3-207ENST00000440452 CARMIL1Q5VZK9 1371 aa17.6■□□□□ 0.41
PCGF3-207ENST00000440452 PRXQ9BXM0 1461 aa17.6■□□□□ 0.41
PCGF3-207ENST00000440452 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
PCGF3-207ENST00000440452 RAB3GAP2Q9H2M9 1393 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms