RNA–Protein interactions for RNA: ENST00000488032.1

PCGF3-212, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-212ENST00000488032 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
PCGF3-212ENST00000488032 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
PCGF3-212ENST00000488032 PHF23Q9BUL5 403 aaPredicted RBP14.85□□□□□ -0.03
PCGF3-212ENST00000488032 SENP3Q9H4L4 574 aaPredicted RBP14.64□□□□□ -0.07
PCGF3-212ENST00000488032 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
PCGF3-212ENST00000488032 FOXD1Q16676 465 aa13.52□□□□□ -0.25
PCGF3-212ENST00000488032 ADRA2BP18089 450 aa13.06□□□□□ -0.32
PCGF3-212ENST00000488032 PPP6R1Q9UPN7 881 aa13.06□□□□□ -0.32
PCGF3-212ENST00000488032 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
PCGF3-212ENST00000488032 MSH5O43196 834 aa12.5□□□□□ -0.41
PCGF3-212ENST00000488032 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
PCGF3-212ENST00000488032 SCAF1Q9H7N4 1312 aaKnown RBP12.04□□□□□ -0.48
PCGF3-212ENST00000488032 KCNA4P22459 653 aa11.96□□□□□ -0.49
PCGF3-212ENST00000488032 NCBP3Q53F19 620 aaKnown RBP11.91□□□□□ -0.5
PCGF3-212ENST00000488032 CNKSR2Q8WXI2 1034 aa11.82□□□□□ -0.52
PCGF3-212ENST00000488032 MAPK8IP2Q13387 824 aaPredicted RBP11.79□□□□□ -0.52
PCGF3-212ENST00000488032 NPM3O75607 178 aaKnown RBP11.69□□□□□ -0.54
PCGF3-212ENST00000488032 DMRT2Q9Y5R5 561 aa11.68□□□□□ -0.54
PCGF3-212ENST00000488032 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
PCGF3-212ENST00000488032 HOXD11P31277 338 aaPredicted RBP11.49□□□□□ -0.57
PCGF3-212ENST00000488032 SLC4A1APQ9BWU0 796 aaKnown RBP11.44□□□□□ -0.58
PCGF3-212ENST00000488032 DNAJC5BQ9UF47 199 aa11.41□□□□□ -0.58
PCGF3-212ENST00000488032 EHMT2Q96KQ7 1210 aa11.19□□□□□ -0.62
PCGF3-212ENST00000488032 DCAF8L1A6NGE4 600 aa11.14□□□□□ -0.63
PCGF3-212ENST00000488032 POTEDQ86YR6 584 aa11.14□□□□□ -0.63
PCGF3-212ENST00000488032 CSRNP3Q8WYN3 585 aa11.02□□□□□ -0.65
PCGF3-212ENST00000488032 FOXD4L1Q9NU39 408 aa11.02□□□□□ -0.65
PCGF3-212ENST00000488032 ZBTB22O15209 634 aa11□□□□□ -0.65
PCGF3-212ENST00000488032 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
PCGF3-212ENST00000488032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.93□□□□□ -0.66
PCGF3-212ENST00000488032 MYCNP04198 464 aaPredicted RBP10.84□□□□□ -0.67
PCGF3-212ENST00000488032 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
PCGF3-212ENST00000488032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.73□□□□□ -0.69
PCGF3-212ENST00000488032 HNRNPUL2Q1KMD3 747 aaKnown RBP10.73□□□□□ -0.69
PCGF3-212ENST00000488032 RNF39Q9H2S5 420 aa10.69□□□□□ -0.7
PCGF3-212ENST00000488032 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
PCGF3-212ENST00000488032 ATXN8OSP0DMR3 200 aa10.66□□□□□ -0.7
PCGF3-212ENST00000488032 APLP2Q06481 763 aa10.61□□□□□ -0.71
PCGF3-212ENST00000488032 C1QBPQ07021 282 aaKnown RBP10.59□□□□□ -0.71
PCGF3-212ENST00000488032 ATF5Q9Y2D1 282 aaPredicted RBP10.46□□□□□ -0.73
PCGF3-212ENST00000488032 ZNF219Q9P2Y4 722 aaPredicted RBP10.41□□□□□ -0.74
PCGF3-212ENST00000488032 SPINK5Q9NQ38 1064 aaPredicted RBP10.4□□□□□ -0.74
PCGF3-212ENST00000488032 CAPN15O75808 1086 aa10.38□□□□□ -0.75
PCGF3-212ENST00000488032 TRHP20396 242 aaPredicted RBP10.35□□□□□ -0.75
PCGF3-212ENST00000488032 CACNB1Q02641 598 aaPredicted RBP10.32□□□□□ -0.76
PCGF3-212ENST00000488032 POLA2Q14181 598 aa10.21□□□□□ -0.77
PCGF3-212ENST00000488032 DSG3P32926 999 aa10.18□□□□□ -0.78
PCGF3-212ENST00000488032 ABCB7O75027 752 aa10.17□□□□□ -0.78
PCGF3-212ENST00000488032 ZBTB12Q9Y330 459 aaPredicted RBP10.13□□□□□ -0.79
PCGF3-212ENST00000488032 FBLN2P98095 1184 aa10.1□□□□□ -0.79
PCGF3-212ENST00000488032 MKRN4PQ13434 485 aaPredicted RBP10.03□□□□□ -0.8
PCGF3-212ENST00000488032 FKBP8Q14318 412 aa9.97□□□□□ -0.81
PCGF3-212ENST00000488032 SPDYE4A6NLX3 237 aa9.89□□□□□ -0.83
PCGF3-212ENST00000488032 OSCARQ8IYS5 282 aa9.86□□□□□ -0.83
PCGF3-212ENST00000488032 SPDYE2BA6NHP3 402 aa9.83□□□□□ -0.84
PCGF3-212ENST00000488032 SPDYE6P0CI01 402 aa9.83□□□□□ -0.84
PCGF3-212ENST00000488032 SPDYE2Q495Y8 402 aa9.83□□□□□ -0.84
PCGF3-212ENST00000488032 ZNF692Q9BU19 519 aaPredicted RBP9.78□□□□□ -0.84
PCGF3-212ENST00000488032 RBM42Q9BTD8 480 aaKnown RBP9.77□□□□□ -0.85
PCGF3-212ENST00000488032 PROM2Q8N271 834 aa9.76□□□□□ -0.85
PCGF3-212ENST00000488032 SSUH2Q9Y2M2 353 aa9.75□□□□□ -0.85
PCGF3-212ENST00000488032 FBXO3Q9UK99 471 aa9.65□□□□□ -0.86
PCGF3-212ENST00000488032 PABPN1Q86U42 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
PCGF3-212ENST00000488032 AKT1S1Q96B36 256 aa9.64□□□□□ -0.87
PCGF3-212ENST00000488032 STAG3Q9UJ98 1225 aa9.56□□□□□ -0.88
PCGF3-212ENST00000488032 REM2Q8IYK8 340 aaPredicted RBP9.52□□□□□ -0.89
PCGF3-212ENST00000488032 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
PCGF3-212ENST00000488032 VASPP50552 380 aaPredicted RBP9.48□□□□□ -0.89
PCGF3-212ENST00000488032 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
PCGF3-212ENST00000488032 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
PCGF3-212ENST00000488032 PRR29P0C7W0 189 aa9.37□□□□□ -0.91
PCGF3-212ENST00000488032 PLEKHG5O94827 1062 aa9.36□□□□□ -0.91
PCGF3-212ENST00000488032 PLCD3Q8N3E9 789 aa9.36□□□□□ -0.91
PCGF3-212ENST00000488032 MIER1Q8N108 512 aa9.35□□□□□ -0.91
PCGF3-212ENST00000488032 IFNLR1Q8IU57 520 aaPredicted RBP9.33□□□□□ -0.92
PCGF3-212ENST00000488032 ZBTB47Q9UFB7 747 aaPredicted RBP9.32□□□□□ -0.92
PCGF3-212ENST00000488032 AMER1Q5JTC6 1135 aaPredicted RBP9.31□□□□□ -0.92
PCGF3-212ENST00000488032 KLHL34Q8N239 644 aa9.28□□□□□ -0.92
PCGF3-212ENST00000488032 CHRDL2Q6WN34 429 aa9.27□□□□□ -0.93
PCGF3-212ENST00000488032 CREBZFQ9NS37 354 aa9.26□□□□□ -0.93
PCGF3-212ENST00000488032 SPOCK2Q92563 424 aa9.24□□□□□ -0.93
PCGF3-212ENST00000488032 FXR2P51116 673 aaKnown RBP eCLIP9.22□□□□□ -0.93
PCGF3-212ENST00000488032 RTN4Q9NQC3 1192 aaKnown RBP9.22□□□□□ -0.93
PCGF3-212ENST00000488032 MNX1P50219 401 aaPredicted RBP9.18□□□□□ -0.94
PCGF3-212ENST00000488032 PRKAR2AP13861 404 aaKnown RBP9.17□□□□□ -0.94
PCGF3-212ENST00000488032 PIP4P2Q8N4L2 257 aa9.17□□□□□ -0.94
PCGF3-212ENST00000488032 NPM1P06748 294 aaKnown RBP eCLIP9.16□□□□□ -0.94
PCGF3-212ENST00000488032 CHADLQ6NUI6 762 aa9.16□□□□□ -0.94
PCGF3-212ENST00000488032 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
PCGF3-212ENST00000488032 NUBP1P53384 320 aa9.1□□□□□ -0.95
PCGF3-212ENST00000488032 GSE1Q14687 1217 aa9.07□□□□□ -0.96
PCGF3-212ENST00000488032 FAM212AQ96EL1 285 aa9.07□□□□□ -0.96
PCGF3-212ENST00000488032 PKD2Q13563 968 aa9.06□□□□□ -0.96
PCGF3-212ENST00000488032 CIZ1Q9ULV3 898 aaPredicted RBP9.05□□□□□ -0.96
PCGF3-212ENST00000488032 RASEFQ8IZ41 740 aa9.04□□□□□ -0.96
PCGF3-212ENST00000488032 TRIM41Q8WV44 630 aa9.04□□□□□ -0.96
PCGF3-212ENST00000488032 DCAF8Q5TAQ9 597 aa9.02□□□□□ -0.97
PCGF3-212ENST00000488032 ECM2O94769 699 aaPredicted RBP9□□□□□ -0.97
PCGF3-212ENST00000488032 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
PCGF3-212ENST00000488032 TSPYL2Q9H2G4 693 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms