Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.18■■■■□ 3.22
CD48P09326 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
CD48P09326 AL356512.1-201ENST00000607453 1739 ntBASIC34.5■■■■□ 3.11
CD48P09326 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.37■■■■□ 3.09
CD48P09326 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.15■■■■□ 3.06
CD48P09326 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
CD48P09326 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.06■■■■□ 3.04
CD48P09326 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
CD48P09326 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.91■■■■□ 3.02
CD48P09326 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.53■■■□□ 2.96
CD48P09326 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.51■■■□□ 2.96
CD48P09326 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.36■■■□□ 2.93
CD48P09326 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.32■■■□□ 2.92
CD48P09326 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CD48P09326 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.89■■■□□ 2.86
CD48P09326 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.66■■■□□ 2.82
CD48P09326 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.62■■■□□ 2.81
CD48P09326 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CD48P09326 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CD48P09326 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.59■■■□□ 2.81
CD48P09326 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.45■■■□□ 2.79
CD48P09326 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
CD48P09326 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.77
CD48P09326 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
CD48P09326 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
CD48P09326 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.18■■■□□ 2.74
CD48P09326 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
CD48P09326 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
CD48P09326 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CD48P09326 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CD48P09326 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CD48P09326 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
CD48P09326 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
CD48P09326 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.91■■■□□ 2.7
CD48P09326 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.8■■■□□ 2.68
CD48P09326 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
CD48P09326 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CD48P09326 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.7■■■□□ 2.66
CD48P09326 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CD48P09326 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CD48P09326 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.49■■■□□ 2.63
CD48P09326 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.62
CD48P09326 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.29■■■□□ 2.6
CD48P09326 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.27■■■□□ 2.6
CD48P09326 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CD48P09326 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
CD48P09326 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CD48P09326 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CD48P09326 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CD48P09326 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CD48P09326 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CD48P09326 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CD48P09326 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.05■■■□□ 2.56
CD48P09326 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
CD48P09326 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
CD48P09326 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CD48P09326 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CD48P09326 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.95■■■□□ 2.54
CD48P09326 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.94■■■□□ 2.54
CD48P09326 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.91■■■□□ 2.54
CD48P09326 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CD48P09326 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CD48P09326 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
CD48P09326 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.73■■■□□ 2.51
CD48P09326 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CD48P09326 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CD48P09326 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CD48P09326 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CD48P09326 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CD48P09326 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
CD48P09326 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CD48P09326 AC015813.7-201ENST00000623294 581 ntBASIC30.61■■■□□ 2.49
CD48P09326 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
CD48P09326 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CD48P09326 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CD48P09326 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.44■■■□□ 2.46
CD48P09326 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.41■■■□□ 2.46
CD48P09326 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
CD48P09326 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CD48P09326 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CD48P09326 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CD48P09326 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CD48P09326 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CD48P09326 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CD48P09326 AC145285.7-201ENST00000614819 1539 ntBASIC30.18■■■□□ 2.42
CD48P09326 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.16■■■□□ 2.42
CD48P09326 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CD48P09326 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CD48P09326 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CD48P09326 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CD48P09326 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.11■■■□□ 2.41
CD48P09326 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CD48P09326 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CD48P09326 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
CD48P09326 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.05■■■□□ 2.4
CD48P09326 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
CD48P09326 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CD48P09326 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CD48P09326 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CD48P09326 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms