Protein–RNA interactions for Protein: P08519

LPA, Apolipoprotein(a), humanhuman

Predictions only

Length 4,548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPAP08519 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.3■□□□□ 0.68
LPAP08519 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LPAP08519 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LPAP08519 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LPAP08519 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LPAP08519 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LPAP08519 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LPAP08519 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LPAP08519 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LPAP08519 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LPAP08519 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC18.45■□□□□ 0.54
LPAP08519 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LPAP08519 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC18.32■□□□□ 0.52
LPAP08519 AL356512.1-201ENST00000607453 1739 ntBASIC18.29■□□□□ 0.52
LPAP08519 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC18.29■□□□□ 0.52
LPAP08519 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LPAP08519 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LPAP08519 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LPAP08519 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LPAP08519 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LPAP08519 INO80B-203ENST00000409917 796 ntTSL 2 BASIC17.92■□□□□ 0.46
LPAP08519 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LPAP08519 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LPAP08519 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LPAP08519 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
LPAP08519 ZNRF2P1-201ENST00000441407 443 ntBASIC17.84■□□□□ 0.45
LPAP08519 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LPAP08519 AC006077.2-201ENST00000623591 457 ntBASIC17.79■□□□□ 0.44
LPAP08519 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC17.79■□□□□ 0.44
LPAP08519 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LPAP08519 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LPAP08519 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC17.67■□□□□ 0.42
LPAP08519 AC015813.7-201ENST00000623294 581 ntBASIC17.51■□□□□ 0.39
LPAP08519 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LPAP08519 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC17.44■□□□□ 0.38
LPAP08519 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC17.42■□□□□ 0.38
LPAP08519 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LPAP08519 AP002365.1-201ENST00000603448 772 ntBASIC17.36■□□□□ 0.37
LPAP08519 HES6-203ENST00000409160 1600 ntTSL 2 BASIC17.35■□□□□ 0.37
LPAP08519 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC17.34■□□□□ 0.37
LPAP08519 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LPAP08519 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
LPAP08519 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LPAP08519 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LPAP08519 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPAP08519 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.27■□□□□ 0.36
LPAP08519 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LPAP08519 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LPAP08519 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC17.21■□□□□ 0.35
LPAP08519 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
LPAP08519 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LPAP08519 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC17.15■□□□□ 0.34
LPAP08519 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPAP08519 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.13■□□□□ 0.33
LPAP08519 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC17.13■□□□□ 0.33
LPAP08519 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LPAP08519 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LPAP08519 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LPAP08519 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC17.06■□□□□ 0.32
LPAP08519 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LPAP08519 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LPAP08519 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
LPAP08519 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC16.97■□□□□ 0.31
LPAP08519 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LPAP08519 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC16.97■□□□□ 0.31
LPAP08519 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LPAP08519 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LPAP08519 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LPAP08519 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LPAP08519 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LPAP08519 DYNLL1-208ENST00000550178 581 ntBASIC16.87■□□□□ 0.29
LPAP08519 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.86■□□□□ 0.29
LPAP08519 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.86■□□□□ 0.29
LPAP08519 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC16.83■□□□□ 0.28
LPAP08519 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC16.81■□□□□ 0.28
LPAP08519 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LPAP08519 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LPAP08519 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LPAP08519 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LPAP08519 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LPAP08519 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LPAP08519 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.74■□□□□ 0.27
LPAP08519 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPAP08519 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPAP08519 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.74■□□□□ 0.27
LPAP08519 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.72■□□□□ 0.27
LPAP08519 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC16.71■□□□□ 0.27
LPAP08519 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LPAP08519 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LPAP08519 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPAP08519 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPAP08519 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LPAP08519 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC16.68■□□□□ 0.26
LPAP08519 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC16.68■□□□□ 0.26
LPAP08519 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC16.68■□□□□ 0.26
LPAP08519 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC16.67■□□□□ 0.26
LPAP08519 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.67■□□□□ 0.26
LPAP08519 AL031258.1-201ENST00000623562 325 ntBASIC16.67■□□□□ 0.26
LPAP08519 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC16.66■□□□□ 0.26
LPAP08519 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms