Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.63■■■□□ 2.97
ZFC3H1O60293 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
ZFC3H1O60293 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
ZFC3H1O60293 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
ZFC3H1O60293 AL356512.1-201ENST00000607453 1739 ntBASIC32.66■■■□□ 2.82
ZFC3H1O60293 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.61■■■□□ 2.81
ZFC3H1O60293 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
ZFC3H1O60293 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.22■■■□□ 2.75
ZFC3H1O60293 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.08■■■□□ 2.73
ZFC3H1O60293 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.91■■■□□ 2.7
ZFC3H1O60293 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.79■■■□□ 2.68
ZFC3H1O60293 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
ZFC3H1O60293 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.72■■■□□ 2.67
ZFC3H1O60293 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
ZFC3H1O60293 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.5■■■□□ 2.63
ZFC3H1O60293 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
ZFC3H1O60293 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.4■■■□□ 2.62
ZFC3H1O60293 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.36■■■□□ 2.61
ZFC3H1O60293 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ZFC3H1O60293 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.27■■■□□ 2.6
ZFC3H1O60293 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
ZFC3H1O60293 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
ZFC3H1O60293 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
ZFC3H1O60293 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ZFC3H1O60293 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ZFC3H1O60293 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
ZFC3H1O60293 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ZFC3H1O60293 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
ZFC3H1O60293 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
ZFC3H1O60293 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.49■■■□□ 2.47
ZFC3H1O60293 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ZFC3H1O60293 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ZFC3H1O60293 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
ZFC3H1O60293 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ZFC3H1O60293 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
ZFC3H1O60293 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
ZFC3H1O60293 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.25■■■□□ 2.43
ZFC3H1O60293 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.2■■■□□ 2.42
ZFC3H1O60293 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.18■■■□□ 2.42
ZFC3H1O60293 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
ZFC3H1O60293 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ZFC3H1O60293 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.05■■■□□ 2.4
ZFC3H1O60293 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
ZFC3H1O60293 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ZFC3H1O60293 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.92■■■□□ 2.38
ZFC3H1O60293 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ZFC3H1O60293 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.89■■■□□ 2.38
ZFC3H1O60293 AC015813.7-201ENST00000623294 581 ntBASIC29.83■■■□□ 2.37
ZFC3H1O60293 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
ZFC3H1O60293 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.79■■■□□ 2.36
ZFC3H1O60293 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ZFC3H1O60293 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
ZFC3H1O60293 AC006077.2-201ENST00000623591 457 ntBASIC29.69■■■□□ 2.34
ZFC3H1O60293 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
ZFC3H1O60293 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.68■■■□□ 2.34
ZFC3H1O60293 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
ZFC3H1O60293 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.65■■■□□ 2.34
ZFC3H1O60293 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
ZFC3H1O60293 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.63■■■□□ 2.33
ZFC3H1O60293 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ZFC3H1O60293 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
ZFC3H1O60293 ZNRF2P1-201ENST00000441407 443 ntBASIC29.44■■■□□ 2.3
ZFC3H1O60293 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.44■■■□□ 2.3
ZFC3H1O60293 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
ZFC3H1O60293 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ZFC3H1O60293 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.33■■■□□ 2.29
ZFC3H1O60293 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
ZFC3H1O60293 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ZFC3H1O60293 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
ZFC3H1O60293 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
ZFC3H1O60293 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
ZFC3H1O60293 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
ZFC3H1O60293 AP002365.1-201ENST00000603448 772 ntBASIC29.02■■■□□ 2.24
ZFC3H1O60293 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
ZFC3H1O60293 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
ZFC3H1O60293 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ZFC3H1O60293 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
ZFC3H1O60293 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
ZFC3H1O60293 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
ZFC3H1O60293 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ZFC3H1O60293 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
ZFC3H1O60293 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.85■■■□□ 2.21
ZFC3H1O60293 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.85■■■□□ 2.21
ZFC3H1O60293 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.84■■■□□ 2.21
ZFC3H1O60293 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
ZFC3H1O60293 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.82■■■□□ 2.2
ZFC3H1O60293 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.81■■■□□ 2.2
ZFC3H1O60293 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
ZFC3H1O60293 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.79■■■□□ 2.2
ZFC3H1O60293 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
ZFC3H1O60293 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ZFC3H1O60293 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ZFC3H1O60293 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.65■■■□□ 2.18
ZFC3H1O60293 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.64■■■□□ 2.17
ZFC3H1O60293 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ZFC3H1O60293 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.62■■■□□ 2.17
ZFC3H1O60293 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
ZFC3H1O60293 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.62■■■□□ 2.17
ZFC3H1O60293 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
ZFC3H1O60293 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms