Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
IGHV3-43A0A0B4J1X8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
IGHV3-43A0A0B4J1X8 AL356512.1-201ENST00000607453 1739 ntBASIC27.34■■□□□ 1.97
IGHV3-43A0A0B4J1X8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
IGHV3-43A0A0B4J1X8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.08■■□□□ 1.93
IGHV3-43A0A0B4J1X8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.07■■□□□ 1.92
IGHV3-43A0A0B4J1X8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
IGHV3-43A0A0B4J1X8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
IGHV3-43A0A0B4J1X8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC26.87■■□□□ 1.89
IGHV3-43A0A0B4J1X8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
IGHV3-43A0A0B4J1X8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.62■■□□□ 1.85
IGHV3-43A0A0B4J1X8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
IGHV3-43A0A0B4J1X8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
IGHV3-43A0A0B4J1X8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC26.3■■□□□ 1.8
IGHV3-43A0A0B4J1X8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
IGHV3-43A0A0B4J1X8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
IGHV3-43A0A0B4J1X8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC25.96■■□□□ 1.75
IGHV3-43A0A0B4J1X8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
IGHV3-43A0A0B4J1X8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC25.88■■□□□ 1.73
IGHV3-43A0A0B4J1X8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
IGHV3-43A0A0B4J1X8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
IGHV3-43A0A0B4J1X8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
IGHV3-43A0A0B4J1X8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC25.64■■□□□ 1.7
IGHV3-43A0A0B4J1X8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
IGHV3-43A0A0B4J1X8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
IGHV3-43A0A0B4J1X8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
IGHV3-43A0A0B4J1X8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
IGHV3-43A0A0B4J1X8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC25.45■■□□□ 1.66
IGHV3-43A0A0B4J1X8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
IGHV3-43A0A0B4J1X8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
IGHV3-43A0A0B4J1X8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
IGHV3-43A0A0B4J1X8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
IGHV3-43A0A0B4J1X8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.33■■□□□ 1.65
IGHV3-43A0A0B4J1X8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
IGHV3-43A0A0B4J1X8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
IGHV3-43A0A0B4J1X8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
IGHV3-43A0A0B4J1X8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
IGHV3-43A0A0B4J1X8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC25.19■■□□□ 1.62
IGHV3-43A0A0B4J1X8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.15■■□□□ 1.62
IGHV3-43A0A0B4J1X8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
IGHV3-43A0A0B4J1X8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
IGHV3-43A0A0B4J1X8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
IGHV3-43A0A0B4J1X8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC24.94■■□□□ 1.58
IGHV3-43A0A0B4J1X8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC24.91■■□□□ 1.58
IGHV3-43A0A0B4J1X8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
IGHV3-43A0A0B4J1X8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.77■■□□□ 1.56
IGHV3-43A0A0B4J1X8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
IGHV3-43A0A0B4J1X8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
IGHV3-43A0A0B4J1X8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
IGHV3-43A0A0B4J1X8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC24.68■■□□□ 1.54
IGHV3-43A0A0B4J1X8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
IGHV3-43A0A0B4J1X8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
IGHV3-43A0A0B4J1X8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
IGHV3-43A0A0B4J1X8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
IGHV3-43A0A0B4J1X8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC24.57■■□□□ 1.52
IGHV3-43A0A0B4J1X8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
IGHV3-43A0A0B4J1X8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
IGHV3-43A0A0B4J1X8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
IGHV3-43A0A0B4J1X8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
IGHV3-43A0A0B4J1X8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
IGHV3-43A0A0B4J1X8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC24.47■■□□□ 1.51
IGHV3-43A0A0B4J1X8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC24.45■■□□□ 1.5
IGHV3-43A0A0B4J1X8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
IGHV3-43A0A0B4J1X8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.41■■□□□ 1.5
IGHV3-43A0A0B4J1X8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
IGHV3-43A0A0B4J1X8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
IGHV3-43A0A0B4J1X8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
IGHV3-43A0A0B4J1X8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
IGHV3-43A0A0B4J1X8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
IGHV3-43A0A0B4J1X8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
IGHV3-43A0A0B4J1X8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
IGHV3-43A0A0B4J1X8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
IGHV3-43A0A0B4J1X8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
IGHV3-43A0A0B4J1X8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
IGHV3-43A0A0B4J1X8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
IGHV3-43A0A0B4J1X8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
IGHV3-43A0A0B4J1X8 AC015813.7-201ENST00000623294 581 ntBASIC24.16■■□□□ 1.46
IGHV3-43A0A0B4J1X8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
IGHV3-43A0A0B4J1X8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.14■■□□□ 1.45
IGHV3-43A0A0B4J1X8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC24.11■■□□□ 1.45
IGHV3-43A0A0B4J1X8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
IGHV3-43A0A0B4J1X8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
IGHV3-43A0A0B4J1X8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
IGHV3-43A0A0B4J1X8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
IGHV3-43A0A0B4J1X8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
IGHV3-43A0A0B4J1X8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
IGHV3-43A0A0B4J1X8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
IGHV3-43A0A0B4J1X8 AC145285.7-201ENST00000614819 1539 ntBASIC23.97■■□□□ 1.43
IGHV3-43A0A0B4J1X8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
IGHV3-43A0A0B4J1X8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
IGHV3-43A0A0B4J1X8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC23.9■■□□□ 1.42
IGHV3-43A0A0B4J1X8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC23.88■■□□□ 1.41
IGHV3-43A0A0B4J1X8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
IGHV3-43A0A0B4J1X8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
IGHV3-43A0A0B4J1X8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
IGHV3-43A0A0B4J1X8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
IGHV3-43A0A0B4J1X8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
IGHV3-43A0A0B4J1X8 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
IGHV3-43A0A0B4J1X8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
IGHV3-43A0A0B4J1X8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms