Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 NME1-206ENST00000475573 781 ntTSL 310.64□□□□□ -0.712e-7■■□□□ 11.8
SUB1P53999 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.026e-18■■□□□ 11.8
SUB1P53999 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.236e-18■■□□□ 11.8
SUB1P53999 RPS14-205ENST00000519690 3119 ntTSL 212.16□□□□□ -0.466e-18■■□□□ 11.8
SUB1P53999 RPS14-207ENST00000521466 592 ntAPPRIS P1 TSL 510.48□□□□□ -0.736e-18■■□□□ 11.8
SUB1P53999 RPS14-204ENST00000518139 669 ntTSL 38.7□□□□□ -1.026e-18■■□□□ 11.8
SUB1P53999 RPS14-202ENST00000401695 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.026e-18■■□□□ 11.8
SUB1P53999 PSMA5-202ENST00000477897 275 ntTSL 22.5□□□□□ -2.015e-7■■□□□ 11.8
SUB1P53999 PSMA5-203ENST00000484563 1503 ntTSL 212.31□□□□□ -0.442e-7■■□□□ 11.8
SUB1P53999 SREBF1-208ENST00000469356 1323 ntTSL 317.95■□□□□ 0.468e-8■■□□□ 11.8
SUB1P53999 DPP7-211ENST00000485456 968 ntTSL 517.93■□□□□ 0.468e-8■■□□□ 11.8
SUB1P53999 GSE1-204ENST00000411612 872 ntTSL 516.42■□□□□ 0.224e-6■■□□□ 11.8
SUB1P53999 DPP7-205ENST00000472306 919 ntTSL 516.38■□□□□ 0.218e-8■■□□□ 11.8
SUB1P53999 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.05■□□□□ 0.164e-6■■□□□ 11.8
SUB1P53999 DPP7-202ENST00000460830 639 ntTSL 215.34■□□□□ 0.058e-8■■□□□ 11.8
SUB1P53999 SREBF1-203ENST00000395751 4653 ntTSL 214.99□□□□□ -0.018e-8■■□□□ 11.8
SUB1P53999 SREBF1-204ENST00000395756 3026 ntTSL 214.34□□□□□ -0.118e-8■■□□□ 11.8
SUB1P53999 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.188e-8■■□□□ 11.8
SUB1P53999 SREBF1-219ENST00000580540 540 ntTSL 412.53□□□□□ -0.48e-8■■□□□ 11.8
SUB1P53999 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.48□□□□□ -0.415e-10■■□□□ 11.8
SUB1P53999 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.3□□□□□ -0.448e-8■■□□□ 11.8
SUB1P53999 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.455e-10■■□□□ 11.8
SUB1P53999 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.454e-6■■□□□ 11.8
SUB1P53999 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.498e-8■■□□□ 11.8
SUB1P53999 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.531e-13■■□□□ 11.8
SUB1P53999 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.538e-8■■□□□ 11.8
SUB1P53999 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.534e-6■■□□□ 11.8
SUB1P53999 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.544e-6■■□□□ 11.8
SUB1P53999 VARS-219ENST00000461328 662 ntTSL 311.65□□□□□ -0.544e-6■■□□□ 11.8
SUB1P53999 SREBF1-221ENST00000583080 482 ntTSL 511.53□□□□□ -0.568e-8■■□□□ 11.8
SUB1P53999 VARS-223ENST00000474643 885 ntTSL 511.47□□□□□ -0.574e-6■■□□□ 11.8
SUB1P53999 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.68e-8■■□□□ 11.8
SUB1P53999 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.27□□□□□ -0.618e-8■■□□□ 11.8
SUB1P53999 RSRC2-204ENST00000433877 1956 ntTSL 210.88□□□□□ -0.674e-6■■□□□ 11.8
SUB1P53999 ASH2L-203ENST00000517496 2194 ntTSL 210.69□□□□□ -0.78e-8■■□□□ 11.8
SUB1P53999 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.718e-8■■□□□ 11.8
SUB1P53999 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC10.57□□□□□ -0.724e-6■■□□□ 11.8
SUB1P53999 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.738e-8■■□□□ 11.8
SUB1P53999 TMED10-204ENST00000555873 1161 ntTSL 1 (best)10.05□□□□□ -0.88e-8■■□□□ 11.8
SUB1P53999 GSE1-215ENST00000635906 666 ntTSL 39.89□□□□□ -0.834e-6■■□□□ 11.8
SUB1P53999 ASH2L-206ENST00000520079 2119 ntTSL 29.78□□□□□ -0.848e-8■■□□□ 11.8
SUB1P53999 PRKDC-207ENST00000536483 834 ntTSL 29.31□□□□□ -0.924e-6■■□□□ 11.8
SUB1P53999 SREBF1-215ENST00000487401 477 ntTSL 29.24□□□□□ -0.938e-8■■□□□ 11.8
SUB1P53999 ASH2L-208ENST00000521808 613 ntTSL 59.14□□□□□ -0.958e-8■■□□□ 11.8
SUB1P53999 RSRC2-220ENST00000532695 2001 ntTSL 29.14□□□□□ -0.954e-6■■□□□ 11.8
SUB1P53999 SF3B6-201ENST00000233468 770 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.014e-6■■□□□ 11.8
SUB1P53999 ATP6V1F-202ENST00000492758 711 ntTSL 2 BASIC8.5□□□□□ -1.051e-13■■□□□ 11.8
SUB1P53999 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.064e-6■■□□□ 11.8
SUB1P53999 SLC25A17-210ENST00000435456 2262 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.064e-6■■□□□ 11.8
SUB1P53999 FAM83A-204ENST00000521468 614 ntTSL 38.41□□□□□ -1.064e-6■■□□□ 11.8
SUB1P53999 NUP155-205ENST00000507675 673 ntTSL 38.33□□□□□ -1.084e-6■■□□□ 11.8
SUB1P53999 GTF2H3-214ENST00000618160 3252 ntTSL 5 BASIC8.33□□□□□ -1.084e-6■■□□□ 11.8
SUB1P53999 ASH2L-207ENST00000521652 2433 ntTSL 1 (best) BASIC8.32□□□□□ -1.088e-8■■□□□ 11.8
SUB1P53999 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.084e-6■■□□□ 11.8
SUB1P53999 PRPF38A-202ENST00000474048 1059 ntTSL 1 (best)8.23□□□□□ -1.095e-10■■□□□ 11.8
SUB1P53999 ASH2L-202ENST00000428278 2678 ntTSL 1 (best) BASIC7.91□□□□□ -1.148e-8■■□□□ 11.8
SUB1P53999 SLC25A17-201ENST00000263255 2058 ntTSL 1 (best)7.51□□□□□ -1.214e-6■■□□□ 11.8
SUB1P53999 PTTG1-203ENST00000517480 684 ntTSL 57.47□□□□□ -1.218e-8■■□□□ 11.8
SUB1P53999 DYNC1H1-207ENST00000555800 474 ntTSL 27.44□□□□□ -1.224e-6■■□□□ 11.8
SUB1P53999 TMED10-206ENST00000557670 917 ntTSL 27.44□□□□□ -1.228e-8■■□□□ 11.8
SUB1P53999 SLC25A17-216ENST00000491545 2530 ntTSL 1 (best)7.2□□□□□ -1.264e-6■■□□□ 11.8
SUB1P53999 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.284e-6■■□□□ 11.8
SUB1P53999 RIOK3-202ENST00000577250 685 ntTSL 37.02□□□□□ -1.298e-8■■□□□ 11.8
SUB1P53999 RIOK3-204ENST00000581220 2384 ntTSL 26.91□□□□□ -1.38e-8■■□□□ 11.8
SUB1P53999 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC6.6□□□□□ -1.354e-6■■□□□ 11.8
SUB1P53999 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.364e-6■■□□□ 11.8
SUB1P53999 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.47□□□□□ -1.374e-6■■□□□ 11.8
SUB1P53999 HMGCR-207ENST00000509085 637 ntTSL 1 (best)6.31□□□□□ -1.44e-6■■□□□ 11.8
SUB1P53999 PTTG1-207ENST00000524244 434 ntTSL 26.13□□□□□ -1.438e-8■■□□□ 11.8
SUB1P53999 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.484e-6■■□□□ 11.8
SUB1P53999 HMGCR-210ENST00000511986 487 ntTSL 55.82□□□□□ -1.484e-6■■□□□ 11.8
SUB1P53999 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.54e-6■■□□□ 11.8
SUB1P53999 RIOK3-205ENST00000581302 3049 ntTSL 25.58□□□□□ -1.528e-8■■□□□ 11.8
SUB1P53999 HMGCR-211ENST00000512053 465 ntTSL 25.22□□□□□ -1.574e-6■■□□□ 11.8
SUB1P53999 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.618e-8■■□□□ 11.8
SUB1P53999 SLC25A17-212ENST00000447566 1243 ntTSL 55□□□□□ -1.614e-6■■□□□ 11.8
SUB1P53999 TMED10-205ENST00000556969 1314 ntTSL 24.72□□□□□ -1.658e-8■■□□□ 11.8
SUB1P53999 RSRC2-203ENST00000392442 928 ntTSL 34.56□□□□□ -1.684e-6■■□□□ 11.8
SUB1P53999 TMED10-202ENST00000555036 888 ntTSL 1 (best)4.38□□□□□ -1.718e-8■■□□□ 11.8
SUB1P53999 RSRC2-211ENST00000527173 2570 ntTSL 24.15□□□□□ -1.754e-6■■□□□ 11.8
SUB1P53999 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.764e-6■■□□□ 11.8
SUB1P53999 RSRC2-206ENST00000525332 516 ntTSL 33.99□□□□□ -1.774e-6■■□□□ 11.8
SUB1P53999 DYNC1H1-202ENST00000553423 539 ntTSL 43.46□□□□□ -1.864e-6■■□□□ 11.8
SUB1P53999 PTTG1-206ENST00000523659 851 ntTSL 23.29□□□□□ -1.888e-8■■□□□ 11.8
SUB1P53999 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.02□□□□□ -1.934e-6■■□□□ 11.8
SUB1P53999 PSMB3-209ENST00000614132 426 ntTSL 22.7□□□□□ -1.984e-6■■□□□ 11.8
SUB1P53999 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.54□□□□□ -24e-6■■□□□ 11.8
SUB1P53999 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.99□□□□□ -2.094e-6■■□□□ 11.8
SUB1P53999 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.14e-6■■□□□ 11.8
SUB1P53999 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.525e-16■■□□□ 11.8
SUB1P53999 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC6.15□□□□□ -1.425e-16■■□□□ 11.8
SUB1P53999 RBBP4-214ENST00000492348 1547 ntTSL 25.58□□□□□ -1.525e-16■■□□□ 11.8
SUB1P53999 RBBP4-208ENST00000463378 882 ntTSL 54.45□□□□□ -1.75e-16■■□□□ 11.8
SUB1P53999 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.46□□□□□ -0.097e-10■■□□□ 11.8
SUB1P53999 PHB2-210ENST00000544888 872 ntTSL 314.3□□□□□ -0.127e-10■■□□□ 11.8
SUB1P53999 PHB2-211ENST00000545167 908 ntTSL 514.18□□□□□ -0.147e-10■■□□□ 11.8
SUB1P53999 PHB2-209ENST00000544134 652 ntTSL 313.91□□□□□ -0.187e-10■■□□□ 11.8
SUB1P53999 PHB2-204ENST00000536316 739 ntTSL 513.36□□□□□ -0.277e-10■■□□□ 11.8
SUB1P53999 PHB2-214ENST00000546217 628 ntTSL 212.96□□□□□ -0.337e-10■■□□□ 11.8
SUB1P53999 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.13■□□□□ 0.012e-6■■□□□ 11.8
Retrieved 100 of 11,644 protein–RNA pairs in 433.9 ms