RNA–Protein interactions for RNA: ENST00000374793.7

SMC2-203, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-203ENST00000374793 NISCHQ9Y2I1 1504 aa11.41□□□□□ -0.58
SMC2-203ENST00000374793 DCAF8L2P0C7V8 631 aa9.97□□□□□ -0.81
SMC2-203ENST00000374793 ABCC9O60706 1549 aa9.78□□□□□ -0.84
SMC2-203ENST00000374793 CCDC180Q9P1Z9 1646 aa9.7□□□□□ -0.86
SMC2-203ENST00000374793 ZCCHC6Q5VYS8 1495 aaKnown RBP9.49□□□□□ -0.89
SMC2-203ENST00000374793 SHROOM4Q9ULL8 1493 aa9.45□□□□□ -0.9
SMC2-203ENST00000374793 DCAF1Q9Y4B6 1507 aa9.35□□□□□ -0.91
SMC2-203ENST00000374793 PABPN1Q86U42 306 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMC2-203ENST00000374793 MYO15BQ96JP2 1530 aa9.32□□□□□ -0.92
SMC2-203ENST00000374793 NACADO15069 1562 aa9.29□□□□□ -0.92
SMC2-203ENST00000374793 RB1CC1Q8TDY2 1594 aa9.24□□□□□ -0.93
SMC2-203ENST00000374793 SUPT5HO00267 1087 aaKnown RBP9.18□□□□□ -0.94
SMC2-203ENST00000374793 SCRIBQ14160 1630 aa9.1□□□□□ -0.95
SMC2-203ENST00000374793 CECR2Q9BXF3 1484 aa8.99□□□□□ -0.97
SMC2-203ENST00000374793 BICRAQ9NZM4 1560 aa8.92□□□□□ -0.98
SMC2-203ENST00000374793 DNAJC5BQ9UF47 199 aa8.91□□□□□ -0.98
SMC2-203ENST00000374793 RSF1Q96T23 1441 aaPredicted RBP8.9□□□□□ -0.98
SMC2-203ENST00000374793 BAZ1AQ9NRL2 1556 aaPredicted RBP8.83□□□□□ -1
SMC2-203ENST00000374793 MROH2BQ7Z745 1585 aa8.82□□□□□ -1
SMC2-203ENST00000374793 ATAD2BQ9ULI0 1458 aa8.77□□□□□ -1.01
SMC2-203ENST00000374793 NCAPD3P42695 1498 aa8.74□□□□□ -1.01
SMC2-203ENST00000374793 EIF4G1Q04637 1599 aaKnown RBP8.74□□□□□ -1.01
SMC2-203ENST00000374793 BAZ1BQ9UIG0 1483 aaKnown RBP8.7□□□□□ -1.02
SMC2-203ENST00000374793 UNC13AQ9UPW8 1703 aa8.67□□□□□ -1.02
SMC2-203ENST00000374793 SMARCA4P51532 1647 aa8.65□□□□□ -1.02
SMC2-203ENST00000374793 SMARCA2P51531 1590 aa8.65□□□□□ -1.02
SMC2-203ENST00000374793 CHIC1Q5VXU3 224 aa8.63□□□□□ -1.03
SMC2-203ENST00000374793 CADPSQ9ULU8 1353 aa8.6□□□□□ -1.03
SMC2-203ENST00000374793 TRIM41Q8WV44 630 aa8.59□□□□□ -1.03
SMC2-203ENST00000374793 CC2D2AQ9P2K1 1620 aa8.57□□□□□ -1.04
SMC2-203ENST00000374793 WIZO95785 1651 aa8.57□□□□□ -1.04
SMC2-203ENST00000374793 CCDC88BA6NC98 1476 aa8.56□□□□□ -1.04
SMC2-203ENST00000374793 PEG3Q9GZU2 1588 aa8.55□□□□□ -1.04
SMC2-203ENST00000374793 HMGXB3Q12766 1538 aa8.53□□□□□ -1.04
SMC2-203ENST00000374793 TOP2AP11388 1531 aaKnown RBP8.52□□□□□ -1.05
SMC2-203ENST00000374793 FAM9AQ8IZU1 332 aaPredicted RBP8.51□□□□□ -1.05
SMC2-203ENST00000374793 CFTRP13569 1480 aa8.48□□□□□ -1.05
SMC2-203ENST00000374793 PDS5BQ9NTI5 1447 aa8.47□□□□□ -1.05
SMC2-203ENST00000374793 NESP48681 1621 aa8.46□□□□□ -1.06
SMC2-203ENST00000374793 WRNQ14191 1432 aaPredicted RBP eCLIP8.43□□□□□ -1.06
SMC2-203ENST00000374793 FANCD2Q9BXW9 1451 aa8.38□□□□□ -1.07
SMC2-203ENST00000374793 CSRNP3Q8WYN3 585 aa8.38□□□□□ -1.07
SMC2-203ENST00000374793 ERCC6Q03468 1493 aa8.37□□□□□ -1.07
SMC2-203ENST00000374793 EHMT2Q96KQ7 1210 aa8.37□□□□□ -1.07
SMC2-203ENST00000374793 TDRD9Q8NDG6 1382 aaKnown RBP8.34□□□□□ -1.07
SMC2-203ENST00000374793 CEP164Q9UPV0 1460 aa8.32□□□□□ -1.08
SMC2-203ENST00000374793 LOC105371045A0A1W2PR82 267 aa8.31□□□□□ -1.08
SMC2-203ENST00000374793 UBTFP17480 764 aaKnown RBP8.3□□□□□ -1.08
SMC2-203ENST00000374793 LAMC3Q9Y6N6 1575 aa8.29□□□□□ -1.08
SMC2-203ENST00000374793 ABCC8Q09428 1581 aa8.28□□□□□ -1.08
SMC2-203ENST00000374793 SOGA1O94964 1423 aa8.28□□□□□ -1.08
SMC2-203ENST00000374793 FBLN2P98095 1184 aa8.28□□□□□ -1.08
SMC2-203ENST00000374793 KIF27Q86VH2 1401 aa8.25□□□□□ -1.09
SMC2-203ENST00000374793 CUX2O14529 1486 aa8.25□□□□□ -1.09
SMC2-203ENST00000374793 TOPBP1Q92547 1522 aa8.24□□□□□ -1.09
SMC2-203ENST00000374793 POLA1P09884 1462 aaPredicted RBP8.23□□□□□ -1.09
SMC2-203ENST00000374793 FGD5Q6ZNL6 1462 aa8.23□□□□□ -1.09
SMC2-203ENST00000374793 RANGAP1P46060 587 aaPredicted RBP8.22□□□□□ -1.09
SMC2-203ENST00000374793 URB2Q14146 1524 aaKnown RBP8.22□□□□□ -1.09
SMC2-203ENST00000374793 EEA1Q15075 1411 aa8.22□□□□□ -1.09
SMC2-203ENST00000374793 CHMP7Q8WUX9 453 aaPredicted RBP8.22□□□□□ -1.09
SMC2-203ENST00000374793 RAD54L2Q9Y4B4 1467 aa8.22□□□□□ -1.09
SMC2-203ENST00000374793 IGF1RP08069 1367 aa8.22□□□□□ -1.09
SMC2-203ENST00000374793 MRC2Q9UBG0 1479 aa8.2□□□□□ -1.1
SMC2-203ENST00000374793 CUX1P39880 1505 aa8.19□□□□□ -1.1
SMC2-203ENST00000374793 CARMIL1Q5VZK9 1371 aa8.19□□□□□ -1.1
SMC2-203ENST00000374793 RUSC2Q8N2Y8 1516 aa8.19□□□□□ -1.1
SMC2-203ENST00000374793 AQRO60306 1485 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMC2-203ENST00000374793 SYNJ1O43426 1573 aa8.16□□□□□ -1.1
SMC2-203ENST00000374793 ZNF608Q9ULD9 1512 aaPredicted RBP8.15□□□□□ -1.1
SMC2-203ENST00000374793 GAPVD1Q14C86 1478 aa8.14□□□□□ -1.11
SMC2-203ENST00000374793 DNMBPQ6XZF7 1577 aa8.13□□□□□ -1.11
SMC2-203ENST00000374793 ABCA10Q8WWZ4 1543 aa8.12□□□□□ -1.11
SMC2-203ENST00000374793 IFT140Q96RY7 1462 aa8.12□□□□□ -1.11
SMC2-203ENST00000374793 JPH4Q96JJ6 628 aa8.1□□□□□ -1.11
SMC2-203ENST00000374793 TOP2BQ02880 1626 aa8.1□□□□□ -1.11
SMC2-203ENST00000374793 OSCARQ8IYS5 282 aa8.1□□□□□ -1.11
SMC2-203ENST00000374793 P3H3Q8IVL6 736 aa8.1□□□□□ -1.11
SMC2-203ENST00000374793 GRIN2BQ13224 1484 aa8.09□□□□□ -1.11
SMC2-203ENST00000374793 PRXQ9BXM0 1461 aa8.09□□□□□ -1.12
SMC2-203ENST00000374793 TTBK1Q5TCY1 1321 aaPredicted RBP8.07□□□□□ -1.12
SMC2-203ENST00000374793 RAPGEF2Q9Y4G8 1499 aa8.05□□□□□ -1.12
SMC2-203ENST00000374793 FHAD1B1AJZ9 1412 aa8.05□□□□□ -1.12
SMC2-203ENST00000374793 TNIKQ9UKE5 1360 aa8.05□□□□□ -1.12
SMC2-203ENST00000374793 WDR62O43379 1518 aa8.04□□□□□ -1.12
SMC2-203ENST00000374793 APLP2Q06481 763 aa8.04□□□□□ -1.12
SMC2-203ENST00000374793 ATP1B4Q9UN42 357 aaPredicted RBP8.04□□□□□ -1.12
SMC2-203ENST00000374793 GOLGA3Q08378 1498 aa8.03□□□□□ -1.12
SMC2-203ENST00000374793 CLIP1P30622 1438 aa8.02□□□□□ -1.13
SMC2-203ENST00000374793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.99□□□□□ -1.13
SMC2-203ENST00000374793 HNRNPUL2Q1KMD3 747 aaKnown RBP7.99□□□□□ -1.13
SMC2-203ENST00000374793 KIF21AQ7Z4S6 1674 aa7.99□□□□□ -1.13
SMC2-203ENST00000374793 MAGI1Q96QZ7 1491 aaPredicted RBP7.98□□□□□ -1.13
SMC2-203ENST00000374793 SNAPC4Q5SXM2 1469 aa7.98□□□□□ -1.13
SMC2-203ENST00000374793 CEP162Q5TB80 1403 aa7.98□□□□□ -1.13
SMC2-203ENST00000374793 ARID3CA6NKF2 412 aa7.97□□□□□ -1.13
SMC2-203ENST00000374793 CYB5RLQ6IPT4 315 aa7.97□□□□□ -1.13
SMC2-203ENST00000374793 BIVM-ERCC5R4GMW8 1640 aa7.97□□□□□ -1.13
SMC2-203ENST00000374793 THOC2Q8NI27 1593 aaKnown RBP7.96□□□□□ -1.13
SMC2-203ENST00000374793 PPARGC1BQ86YN6 1023 aaKnown RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms