RNA–Protein interactions for RNA: ENST00000253458.11

GSE1-201, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GSE1, Length 7,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-201ENST00000253458 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
GSE1-201ENST00000253458 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
GSE1-201ENST00000253458 SUPT5HO00267 1087 aaKnown RBP21.58■■□□□ 1.04
GSE1-201ENST00000253458 SHROOM4Q9ULL8 1493 aa21.25■□□□□ 0.99
GSE1-201ENST00000253458 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
GSE1-201ENST00000253458 RANGAP1P46060 587 aaPredicted RBP20.85■□□□□ 0.93
GSE1-201ENST00000253458 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
GSE1-201ENST00000253458 MYT1Q01538 1121 aa20.67■□□□□ 0.9
GSE1-201ENST00000253458 PELP1Q8IZL8 1130 aaKnown RBP20.54■□□□□ 0.88
GSE1-201ENST00000253458 ATP1B4Q9UN42 357 aaPredicted RBP20.53■□□□□ 0.88
GSE1-201ENST00000253458 APLP2Q06481 763 aa20.48■□□□□ 0.87
GSE1-201ENST00000253458 ERICH6Q7L0X2 663 aa20.35■□□□□ 0.85
GSE1-201ENST00000253458 PCGF6Q9BYE7 350 aa20.17■□□□□ 0.82
GSE1-201ENST00000253458 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
GSE1-201ENST00000253458 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
GSE1-201ENST00000253458 MYT1LQ9UL68 1186 aa19.91■□□□□ 0.78
GSE1-201ENST00000253458 CNGB1Q14028 1251 aaPredicted RBP19.86■□□□□ 0.77
GSE1-201ENST00000253458 YTHDC1Q96MU7 727 aaKnown RBP19.79■□□□□ 0.76
GSE1-201ENST00000253458 POLR3GLQ9BT43 218 aa19.73■□□□□ 0.75
GSE1-201ENST00000253458 UBTFP17480 764 aaKnown RBP19.72■□□□□ 0.75
GSE1-201ENST00000253458 CCER1Q8TC90 406 aaPredicted RBP19.7■□□□□ 0.74
GSE1-201ENST00000253458 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
GSE1-201ENST00000253458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.62■□□□□ 0.73
GSE1-201ENST00000253458 HNRNPUL2Q1KMD3 747 aaKnown RBP19.62■□□□□ 0.73
GSE1-201ENST00000253458 ITGAEP38570 1179 aa19.59■□□□□ 0.73
GSE1-201ENST00000253458 TRIM41Q8WV44 630 aa19.58■□□□□ 0.72
GSE1-201ENST00000253458 SLC4A1APQ9BWU0 796 aaKnown RBP19.5■□□□□ 0.71
GSE1-201ENST00000253458 NEFLP07196 543 aa19.25■□□□□ 0.67
GSE1-201ENST00000253458 CENPBP07199 599 aaPredicted RBP19.25■□□□□ 0.67
GSE1-201ENST00000253458 BCL11AQ9H165 835 aa19.15■□□□□ 0.66
GSE1-201ENST00000253458 DAXXQ9UER7 740 aaPredicted RBP19.07■□□□□ 0.64
GSE1-201ENST00000253458 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
GSE1-201ENST00000253458 SLC24A1O60721 1099 aa19.01■□□□□ 0.63
GSE1-201ENST00000253458 FBLN2P98095 1184 aa18.85■□□□□ 0.61
GSE1-201ENST00000253458 LOC105371045A0A1W2PR82 267 aa18.85■□□□□ 0.61
GSE1-201ENST00000253458 BCANQ96GW7 911 aa18.82■□□□□ 0.6
GSE1-201ENST00000253458 CLSPNQ9HAW4 1339 aa18.8■□□□□ 0.6
GSE1-201ENST00000253458 ZEB1P37275 1124 aaPredicted RBP18.8■□□□□ 0.6
GSE1-201ENST00000253458 ARID3CA6NKF2 412 aa18.8■□□□□ 0.6
GSE1-201ENST00000253458 ZNF326Q5BKZ1 582 aaKnown RBP18.76■□□□□ 0.59
GSE1-201ENST00000253458 FAM50AQ14320 339 aaKnown RBP18.74■□□□□ 0.59
GSE1-201ENST00000253458 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
GSE1-201ENST00000253458 TRIM52Q96A61 297 aa18.7■□□□□ 0.58
GSE1-201ENST00000253458 NEUROD1Q13562 356 aa18.68■□□□□ 0.58
GSE1-201ENST00000253458 ZNF316A6NFI3 1004 aaPredicted RBP18.57■□□□□ 0.56
GSE1-201ENST00000253458 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
GSE1-201ENST00000253458 PLEKHG5O94827 1062 aa18.52■□□□□ 0.55
GSE1-201ENST00000253458 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
GSE1-201ENST00000253458 P3H3Q8IVL6 736 aa18.45■□□□□ 0.54
GSE1-201ENST00000253458 HRCP23327 699 aa18.41■□□□□ 0.54
GSE1-201ENST00000253458 A0A0G2JS52 829 aa18.37■□□□□ 0.53
GSE1-201ENST00000253458 ZNF777Q9ULD5 760 aaPredicted RBP18.33■□□□□ 0.53
GSE1-201ENST00000253458 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
GSE1-201ENST00000253458 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
GSE1-201ENST00000253458 ZBTB47Q9UFB7 747 aaPredicted RBP18.31■□□□□ 0.52
GSE1-201ENST00000253458 CHGAP10645 457 aaKnown RBP18.28■□□□□ 0.52
GSE1-201ENST00000253458 CANXP27824 592 aaKnown RBP18.28■□□□□ 0.52
GSE1-201ENST00000253458 ABCC9O60706 1549 aa18.26■□□□□ 0.51
GSE1-201ENST00000253458 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
GSE1-201ENST00000253458 ESF1Q9H501 851 aaKnown RBP18.17■□□□□ 0.5
GSE1-201ENST00000253458 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
GSE1-201ENST00000253458 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
GSE1-201ENST00000253458 ZBTB7CA1YPR0 619 aa18.14■□□□□ 0.49
GSE1-201ENST00000253458 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
GSE1-201ENST00000253458 NPM2Q86SE8 214 aaKnown RBP18.08■□□□□ 0.49
GSE1-201ENST00000253458 NEFMP07197 916 aa18.05■□□□□ 0.48
GSE1-201ENST00000253458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.472e-9■■□□□ 11.9
GSE1-201ENST00000253458 ANP32CO43423 234 aa17.98■□□□□ 0.47
GSE1-201ENST00000253458 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
GSE1-201ENST00000253458 ARXQ96QS3 562 aa17.91■□□□□ 0.46
GSE1-201ENST00000253458 C14orf37Q86TY3 774 aa17.91■□□□□ 0.46
GSE1-201ENST00000253458 SENP3-EIF4A1A0A087X0R7 540 aa17.89■□□□□ 0.46
GSE1-201ENST00000253458 TULP1O00294 542 aaPredicted RBP17.89■□□□□ 0.46
GSE1-201ENST00000253458 CDK11AQ9UQ88 783 aaPredicted RBP17.83■□□□□ 0.44
GSE1-201ENST00000253458 GTF3C3Q9Y5Q9 886 aa17.82■□□□□ 0.44
GSE1-201ENST00000253458 AMER1Q5JTC6 1135 aaPredicted RBP17.82■□□□□ 0.44
GSE1-201ENST00000253458 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
GSE1-201ENST00000253458 NPM1P06748 294 aaKnown RBP eCLIP17.79■□□□□ 0.445e-8■■■■■ 57.5
GSE1-201ENST00000253458 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
GSE1-201ENST00000253458 HSP90AA1P07900 732 aaKnown RBP17.76■□□□□ 0.43
GSE1-201ENST00000253458 TAOK2Q9UL54 1235 aa17.75■□□□□ 0.43
GSE1-201ENST00000253458 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
GSE1-201ENST00000253458 TPRNQ4KMQ1 711 aa17.72■□□□□ 0.43
GSE1-201ENST00000253458 HIRIP3Q9BW71 556 aaPredicted RBP17.69■□□□□ 0.42
GSE1-201ENST00000253458 HAP1P54257 671 aaPredicted RBP17.68■□□□□ 0.42
GSE1-201ENST00000253458 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
GSE1-201ENST00000253458 KCNH8Q96L42 1107 aa17.66■□□□□ 0.42
GSE1-201ENST00000253458 LMOD2Q6P5Q4 547 aa17.6■□□□□ 0.41
GSE1-201ENST00000253458 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
GSE1-201ENST00000253458 CDK11BP21127 795 aaKnown RBP17.56■□□□□ 0.4
GSE1-201ENST00000253458 DDX10Q13206 875 aaKnown RBP17.55■□□□□ 0.4
GSE1-201ENST00000253458 PPM1GO15355 546 aaPredicted RBP17.54■□□□□ 0.4
GSE1-201ENST00000253458 ANP32AP39687 249 aaKnown RBP17.54■□□□□ 0.4
GSE1-201ENST00000253458 FKBP8Q14318 412 aa17.54■□□□□ 0.4
GSE1-201ENST00000253458 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.4
GSE1-201ENST00000253458 NBR1Q14596 966 aa17.52■□□□□ 0.4
GSE1-201ENST00000253458 PPP1R15AO75807 674 aaPredicted RBP17.52■□□□□ 0.39
GSE1-201ENST00000253458 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
GSE1-201ENST00000253458 GLIPR1L2Q4G1C9 344 aa17.5■□□□□ 0.39
GSE1-201ENST00000253458 TMC1Q8TDI8 760 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms