RNA–Protein interactions for RNA: ENST00000555036.1

TMED10-202, Transcript of transmembrane p24 trafficking protein 10, humanhuman

TSL 1 (best)

Gene TMED10, Length 888 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED10-202ENST00000555036 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.35
TMED10-202ENST00000555036 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
TMED10-202ENST00000555036 NISCHQ9Y2I1 1504 aa15.73■□□□□ 0.11
TMED10-202ENST00000555036 SENP3Q9H4L4 574 aaPredicted RBP14.76□□□□□ -0.05
TMED10-202ENST00000555036 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
TMED10-202ENST00000555036 ABCC9O60706 1549 aa14.46□□□□□ -0.09
TMED10-202ENST00000555036 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
TMED10-202ENST00000555036 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
TMED10-202ENST00000555036 FOXD1Q16676 465 aa13.69□□□□□ -0.22
TMED10-202ENST00000555036 RB1CC1Q8TDY2 1594 aa13.68□□□□□ -0.22
TMED10-202ENST00000555036 PLPPR3Q6T4P5 718 aa13.68□□□□□ -0.22
TMED10-202ENST00000555036 NACADO15069 1562 aa13.54□□□□□ -0.24
TMED10-202ENST00000555036 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
TMED10-202ENST00000555036 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
TMED10-202ENST00000555036 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
TMED10-202ENST00000555036 MYO15BQ96JP2 1530 aa13.27□□□□□ -0.29
TMED10-202ENST00000555036 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
TMED10-202ENST00000555036 SHROOM4Q9ULL8 1493 aa13.1□□□□□ -0.31
TMED10-202ENST00000555036 CECR2Q9BXF3 1484 aa13.07□□□□□ -0.32
TMED10-202ENST00000555036 CC2D2AQ9P2K1 1620 aa13.05□□□□□ -0.32
TMED10-202ENST00000555036 DCAF1Q9Y4B6 1507 aa13□□□□□ -0.33
TMED10-202ENST00000555036 ZCCHC6Q5VYS8 1495 aaKnown RBP12.98□□□□□ -0.33
TMED10-202ENST00000555036 EIF4G1Q04637 1599 aaKnown RBP12.96□□□□□ -0.33
TMED10-202ENST00000555036 SCRIBQ14160 1630 aa12.93□□□□□ -0.34
TMED10-202ENST00000555036 ADRA2BP18089 450 aa12.89□□□□□ -0.35
TMED10-202ENST00000555036 MSH5O43196 834 aa12.88□□□□□ -0.35
TMED10-202ENST00000555036 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
TMED10-202ENST00000555036 DNAJC5Q9H3Z4 198 aa12.87□□□□□ -0.35
TMED10-202ENST00000555036 PIAS4Q8N2W9 510 aaPredicted RBP12.79□□□□□ -0.36
TMED10-202ENST00000555036 CUX2O14529 1486 aa12.6□□□□□ -0.39
TMED10-202ENST00000555036 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
TMED10-202ENST00000555036 NCAPD3P42695 1498 aa12.49□□□□□ -0.41
TMED10-202ENST00000555036 POTEDQ86YR6 584 aa12.45□□□□□ -0.42
TMED10-202ENST00000555036 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.42
TMED10-202ENST00000555036 SMARCA2P51531 1590 aa12.39□□□□□ -0.43
TMED10-202ENST00000555036 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
TMED10-202ENST00000555036 NESP48681 1621 aa12.33□□□□□ -0.43
TMED10-202ENST00000555036 SMARCA4P51532 1647 aa12.32□□□□□ -0.44
TMED10-202ENST00000555036 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
TMED10-202ENST00000555036 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
TMED10-202ENST00000555036 BAZ1AQ9NRL2 1556 aaPredicted RBP12.25□□□□□ -0.45
TMED10-202ENST00000555036 LAMC3Q9Y6N6 1575 aa12.25□□□□□ -0.45
TMED10-202ENST00000555036 KCNA4P22459 653 aa12.22□□□□□ -0.45
TMED10-202ENST00000555036 PDS5BQ9NTI5 1447 aa12.21□□□□□ -0.45
TMED10-202ENST00000555036 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
TMED10-202ENST00000555036 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
TMED10-202ENST00000555036 KIF21AQ7Z4S6 1674 aa12.16□□□□□ -0.46
TMED10-202ENST00000555036 PPP4R3CPQ6ZMV5 832 aa12.12□□□□□ -0.47
TMED10-202ENST00000555036 CADPSQ9ULU8 1353 aa12.11□□□□□ -0.47
TMED10-202ENST00000555036 MROH2BQ7Z745 1585 aa12.1□□□□□ -0.47
TMED10-202ENST00000555036 MRC2Q9UBG0 1479 aa12.1□□□□□ -0.47
TMED10-202ENST00000555036 WDR62O43379 1518 aa12.06□□□□□ -0.48
TMED10-202ENST00000555036 OSCARQ8IYS5 282 aa12.01□□□□□ -0.49
TMED10-202ENST00000555036 CEP164Q9UPV0 1460 aa12.01□□□□□ -0.49
TMED10-202ENST00000555036 EHMT2Q96KQ7 1210 aa11.99□□□□□ -0.49
TMED10-202ENST00000555036 FANCD2Q9BXW9 1451 aa11.96□□□□□ -0.49
TMED10-202ENST00000555036 WIZO95785 1651 aa11.94□□□□□ -0.5
TMED10-202ENST00000555036 CFTRP13569 1480 aa11.9□□□□□ -0.5
TMED10-202ENST00000555036 NCBP3Q53F19 620 aaKnown RBP11.87□□□□□ -0.51
TMED10-202ENST00000555036 URB2Q14146 1524 aaKnown RBP11.85□□□□□ -0.51
TMED10-202ENST00000555036 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
TMED10-202ENST00000555036 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
TMED10-202ENST00000555036 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
TMED10-202ENST00000555036 TOP2AP11388 1531 aaKnown RBP11.8□□□□□ -0.52
TMED10-202ENST00000555036 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
TMED10-202ENST00000555036 IFT140Q96RY7 1462 aa11.78□□□□□ -0.52
TMED10-202ENST00000555036 SCAF1Q9H7N4 1312 aaKnown RBP11.78□□□□□ -0.52
TMED10-202ENST00000555036 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
TMED10-202ENST00000555036 PRDM2Q13029 1718 aa11.74□□□□□ -0.53
TMED10-202ENST00000555036 ZNF608Q9ULD9 1512 aaPredicted RBP11.74□□□□□ -0.53
TMED10-202ENST00000555036 CYB5RLQ6IPT4 315 aa11.73□□□□□ -0.53
TMED10-202ENST00000555036 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
TMED10-202ENST00000555036 SLC4A1APQ9BWU0 796 aaKnown RBP11.71□□□□□ -0.53
TMED10-202ENST00000555036 DMRT2Q9Y5R5 561 aa11.71□□□□□ -0.53
TMED10-202ENST00000555036 ABCC8Q09428 1581 aa11.71□□□□□ -0.54
TMED10-202ENST00000555036 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
TMED10-202ENST00000555036 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
TMED10-202ENST00000555036 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
TMED10-202ENST00000555036 MAPK8IP2Q13387 824 aaPredicted RBP11.67□□□□□ -0.54
TMED10-202ENST00000555036 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
TMED10-202ENST00000555036 CCDC88BA6NC98 1476 aa11.66□□□□□ -0.54
TMED10-202ENST00000555036 FBLN2P98095 1184 aa11.65□□□□□ -0.54
TMED10-202ENST00000555036 DNMBPQ6XZF7 1577 aa11.63□□□□□ -0.55
TMED10-202ENST00000555036 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.55
TMED10-202ENST00000555036 ARAP1Q96P48 1450 aa11.63□□□□□ -0.55
TMED10-202ENST00000555036 CHD1O14646 1710 aa11.62□□□□□ -0.55
TMED10-202ENST00000555036 TARBP1Q13395 1621 aaKnown RBP11.59□□□□□ -0.55
TMED10-202ENST00000555036 POLA1P09884 1462 aaPredicted RBP11.56□□□□□ -0.56
TMED10-202ENST00000555036 SOGA1O94964 1423 aa11.53□□□□□ -0.56
TMED10-202ENST00000555036 CHMP7Q8WUX9 453 aaPredicted RBP11.53□□□□□ -0.56
TMED10-202ENST00000555036 TDRD9Q8NDG6 1382 aaKnown RBP11.53□□□□□ -0.56
TMED10-202ENST00000555036 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.57
TMED10-202ENST00000555036 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
TMED10-202ENST00000555036 SYNJ1O43426 1573 aa11.5□□□□□ -0.57
TMED10-202ENST00000555036 SNAPC4Q5SXM2 1469 aa11.5□□□□□ -0.57
TMED10-202ENST00000555036 WDR97A6NE52 1622 aa11.49□□□□□ -0.57
TMED10-202ENST00000555036 CLASP1Q7Z460 1538 aa11.49□□□□□ -0.57
TMED10-202ENST00000555036 MAGI1Q96QZ7 1491 aaPredicted RBP11.48□□□□□ -0.57
TMED10-202ENST00000555036 GRIN2BQ13224 1484 aa11.46□□□□□ -0.57
TMED10-202ENST00000555036 FGD5Q6ZNL6 1462 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms