RNA–Protein interactions for RNA: ENST00000414241.7

RBBP4-204, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-204ENST00000414241 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
RBBP4-204ENST00000414241 CCDC180Q9P1Z9 1646 aa28.68■■■□□ 2.18
RBBP4-204ENST00000414241 ZCCHC6Q5VYS8 1495 aaKnown RBP27.72■■■□□ 2.03
RBBP4-204ENST00000414241 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
RBBP4-204ENST00000414241 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.95
RBBP4-204ENST00000414241 ABCC9O60706 1549 aa27.02■■□□□ 1.92
RBBP4-204ENST00000414241 MYO15BQ96JP2 1530 aa27.02■■□□□ 1.92
RBBP4-204ENST00000414241 SHROOM4Q9ULL8 1493 aa26.87■■□□□ 1.89
RBBP4-204ENST00000414241 NACADO15069 1562 aa26.77■■□□□ 1.88
RBBP4-204ENST00000414241 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
RBBP4-204ENST00000414241 SCRIBQ14160 1630 aa26.33■■□□□ 1.8
RBBP4-204ENST00000414241 SUPT5HO00267 1087 aaKnown RBP25.97■■□□□ 1.75
RBBP4-204ENST00000414241 UNC13AQ9UPW8 1703 aa25.74■■□□□ 1.71
RBBP4-204ENST00000414241 RSF1Q96T23 1441 aaPredicted RBP25.63■■□□□ 1.69
RBBP4-204ENST00000414241 BICRAQ9NZM4 1560 aa25.61■■□□□ 1.69
RBBP4-204ENST00000414241 CECR2Q9BXF3 1484 aa25.57■■□□□ 1.68
RBBP4-204ENST00000414241 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
RBBP4-204ENST00000414241 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
RBBP4-204ENST00000414241 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
RBBP4-204ENST00000414241 SMARCA4P51532 1647 aa25.28■■□□□ 1.64
RBBP4-204ENST00000414241 WIZO95785 1651 aa25.17■■□□□ 1.62
RBBP4-204ENST00000414241 PEG3Q9GZU2 1588 aa25.03■■□□□ 1.6
RBBP4-204ENST00000414241 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
RBBP4-204ENST00000414241 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
RBBP4-204ENST00000414241 SMARCA2P51531 1590 aa24.92■■□□□ 1.58
RBBP4-204ENST00000414241 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
RBBP4-204ENST00000414241 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
RBBP4-204ENST00000414241 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
RBBP4-204ENST00000414241 CCDC88BA6NC98 1476 aa24.76■■□□□ 1.55
RBBP4-204ENST00000414241 NCAPD3P42695 1498 aa24.73■■□□□ 1.55
RBBP4-204ENST00000414241 HMGXB3Q12766 1538 aa24.65■■□□□ 1.54
RBBP4-204ENST00000414241 TRIM41Q8WV44 630 aa24.49■■□□□ 1.51
RBBP4-204ENST00000414241 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
RBBP4-204ENST00000414241 CFTRP13569 1480 aa24.18■■□□□ 1.46
RBBP4-204ENST00000414241 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
RBBP4-204ENST00000414241 WRNQ14191 1432 aaPredicted RBP eCLIP24.14■■□□□ 1.45
RBBP4-204ENST00000414241 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
RBBP4-204ENST00000414241 LOC105371045A0A1W2PR82 267 aa23.94■■□□□ 1.42
RBBP4-204ENST00000414241 FAM9AQ8IZU1 332 aaPredicted RBP23.94■■□□□ 1.42
RBBP4-204ENST00000414241 SYNJ1O43426 1573 aa23.93■■□□□ 1.42
RBBP4-204ENST00000414241 EEA1Q15075 1411 aa23.93■■□□□ 1.42
RBBP4-204ENST00000414241 PRDM2Q13029 1718 aa23.89■■□□□ 1.41
RBBP4-204ENST00000414241 TOP2BQ02880 1626 aa23.89■■□□□ 1.41
RBBP4-204ENST00000414241 BIVM-ERCC5R4GMW8 1640 aa23.83■■□□□ 1.41
RBBP4-204ENST00000414241 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
RBBP4-204ENST00000414241 SOGA1O94964 1423 aa23.81■■□□□ 1.4
RBBP4-204ENST00000414241 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
RBBP4-204ENST00000414241 CUX1P39880 1505 aa23.78■■□□□ 1.4
RBBP4-204ENST00000414241 DNAJC5BQ9UF47 199 aa23.76■■□□□ 1.39
RBBP4-204ENST00000414241 CSRNP3Q8WYN3 585 aa23.75■■□□□ 1.39
RBBP4-204ENST00000414241 NESP48681 1621 aa23.72■■□□□ 1.39
RBBP4-204ENST00000414241 PDS5BQ9NTI5 1447 aa23.7■■□□□ 1.38
RBBP4-204ENST00000414241 RUSC2Q8N2Y8 1516 aa23.67■■□□□ 1.38
RBBP4-204ENST00000414241 CEP164Q9UPV0 1460 aa23.63■■□□□ 1.37
RBBP4-204ENST00000414241 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
RBBP4-204ENST00000414241 KIF27Q86VH2 1401 aa23.56■■□□□ 1.36
RBBP4-204ENST00000414241 FGD5Q6ZNL6 1462 aa23.53■■□□□ 1.36
RBBP4-204ENST00000414241 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
RBBP4-204ENST00000414241 GOLGA3Q08378 1498 aa23.52■■□□□ 1.36
RBBP4-204ENST00000414241 TOPBP1Q92547 1522 aa23.52■■□□□ 1.36
RBBP4-204ENST00000414241 TNIKQ9UKE5 1360 aa23.5■■□□□ 1.35
RBBP4-204ENST00000414241 KIF21BO75037 1637 aa23.49■■□□□ 1.35
RBBP4-204ENST00000414241 URB2Q14146 1524 aaKnown RBP23.44■■□□□ 1.34
RBBP4-204ENST00000414241 UBTFP17480 764 aaKnown RBP23.43■■□□□ 1.34
RBBP4-204ENST00000414241 CUX2O14529 1486 aa23.41■■□□□ 1.34
RBBP4-204ENST00000414241 POLA1P09884 1462 aaPredicted RBP23.41■■□□□ 1.34
RBBP4-204ENST00000414241 PRXQ9BXM0 1461 aa23.39■■□□□ 1.33
RBBP4-204ENST00000414241 ABCA10Q8WWZ4 1543 aa23.37■■□□□ 1.33
RBBP4-204ENST00000414241 KIF21AQ7Z4S6 1674 aa23.36■■□□□ 1.33
RBBP4-204ENST00000414241 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
RBBP4-204ENST00000414241 MRC2Q9UBG0 1479 aa23.33■■□□□ 1.33
RBBP4-204ENST00000414241 RAPGEF2Q9Y4G8 1499 aa23.33■■□□□ 1.32
RBBP4-204ENST00000414241 IGF1RP08069 1367 aa23.33■■□□□ 1.32
RBBP4-204ENST00000414241 CEP162Q5TB80 1403 aa23.32■■□□□ 1.32
RBBP4-204ENST00000414241 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
RBBP4-204ENST00000414241 ERCC6Q03468 1493 aa23.22■■□□□ 1.31
RBBP4-204ENST00000414241 CARMIL1Q5VZK9 1371 aa23.21■■□□□ 1.31
RBBP4-204ENST00000414241 WDR62O43379 1518 aa23.19■■□□□ 1.3
RBBP4-204ENST00000414241 WDR97A6NE52 1622 aa23.15■■□□□ 1.3
RBBP4-204ENST00000414241 CLIP1P30622 1438 aa23.14■■□□□ 1.3
RBBP4-204ENST00000414241 TARBP1Q13395 1621 aaKnown RBP23.12■■□□□ 1.29
RBBP4-204ENST00000414241 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
RBBP4-204ENST00000414241 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
RBBP4-204ENST00000414241 IFT140Q96RY7 1462 aa23.1■■□□□ 1.29
RBBP4-204ENST00000414241 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
RBBP4-204ENST00000414241 CUL7Q14999 1698 aa23.07■■□□□ 1.28
RBBP4-204ENST00000414241 TRIM26Q12899 539 aaPredicted RBP23.04■■□□□ 1.28
RBBP4-204ENST00000414241 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.28
RBBP4-204ENST00000414241 PCGF6Q9BYE7 350 aa22.96■■□□□ 1.27
RBBP4-204ENST00000414241 VPS8Q8N3P4 1428 aa22.96■■□□□ 1.27
RBBP4-204ENST00000414241 GRIN2BQ13224 1484 aa22.94■■□□□ 1.26
RBBP4-204ENST00000414241 AQRO60306 1485 aaKnown RBP eCLIP22.93■■□□□ 1.263e-7■■■■■ 37.5
RBBP4-204ENST00000414241 RANGAP1P46060 587 aaPredicted RBP22.91■■□□□ 1.26
RBBP4-204ENST00000414241 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
RBBP4-204ENST00000414241 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
RBBP4-204ENST00000414241 ARAP1Q96P48 1450 aa22.85■■□□□ 1.25
RBBP4-204ENST00000414241 ARHGAP35Q9NRY4 1499 aa22.84■■□□□ 1.25
RBBP4-204ENST00000414241 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
RBBP4-204ENST00000414241 APLP2Q06481 763 aa22.81■■□□□ 1.24
RBBP4-204ENST00000414241 ADAMTS12P58397 1594 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms