RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
GSE1-202ENST00000393243 EHMT2Q96KQ7 1210 aa22.07■■□□□ 1.12
GSE1-202ENST00000393243 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
GSE1-202ENST00000393243 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
GSE1-202ENST00000393243 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.02
GSE1-202ENST00000393243 TTBK1Q5TCY1 1321 aaPredicted RBP21.3■■□□□ 1
GSE1-202ENST00000393243 FAM9AQ8IZU1 332 aaPredicted RBP21■□□□□ 0.95
GSE1-202ENST00000393243 APLP2Q06481 763 aa20.99■□□□□ 0.95
GSE1-202ENST00000393243 ERICH6Q7L0X2 663 aa20.92■□□□□ 0.94
GSE1-202ENST00000393243 RANGAP1P46060 587 aaPredicted RBP20.88■□□□□ 0.93
GSE1-202ENST00000393243 PCGF6Q9BYE7 350 aa20.87■□□□□ 0.93
GSE1-202ENST00000393243 ATP1B4Q9UN42 357 aaPredicted RBP20.59■□□□□ 0.89
GSE1-202ENST00000393243 YTHDC1Q96MU7 727 aaKnown RBP20.56■□□□□ 0.88
GSE1-202ENST00000393243 CENPBP07199 599 aaPredicted RBP20.5■□□□□ 0.87
GSE1-202ENST00000393243 CCER1Q8TC90 406 aaPredicted RBP20.49■□□□□ 0.87
GSE1-202ENST00000393243 MYT1Q01538 1121 aa20.39■□□□□ 0.85
GSE1-202ENST00000393243 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
GSE1-202ENST00000393243 NISCHQ9Y2I1 1504 aa20.28■□□□□ 0.84
GSE1-202ENST00000393243 NEFLP07196 543 aa20.22■□□□□ 0.83
GSE1-202ENST00000393243 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
GSE1-202ENST00000393243 UBTFP17480 764 aaKnown RBP20.1■□□□□ 0.81
GSE1-202ENST00000393243 ZEB1P37275 1124 aaPredicted RBP20.08■□□□□ 0.8
GSE1-202ENST00000393243 CNGB1Q14028 1251 aaPredicted RBP20.04■□□□□ 0.8
GSE1-202ENST00000393243 POLR3GLQ9BT43 218 aa20■□□□□ 0.79
GSE1-202ENST00000393243 ITGAEP38570 1179 aa19.86■□□□□ 0.77
GSE1-202ENST00000393243 DAXXQ9UER7 740 aaPredicted RBP19.86■□□□□ 0.77
GSE1-202ENST00000393243 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
GSE1-202ENST00000393243 MYT1LQ9UL68 1186 aa19.78■□□□□ 0.76
GSE1-202ENST00000393243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
GSE1-202ENST00000393243 HNRNPUL2Q1KMD3 747 aaKnown RBP19.63■□□□□ 0.73
GSE1-202ENST00000393243 SLC4A1APQ9BWU0 796 aaKnown RBP19.61■□□□□ 0.73
GSE1-202ENST00000393243 HRCP23327 699 aa19.54■□□□□ 0.72
GSE1-202ENST00000393243 TRIM26Q12899 539 aaPredicted RBP19.49■□□□□ 0.71
GSE1-202ENST00000393243 LOC105371045A0A1W2PR82 267 aa19.45■□□□□ 0.7
GSE1-202ENST00000393243 CLSPNQ9HAW4 1339 aa19.43■□□□□ 0.7
GSE1-202ENST00000393243 ZNF316A6NFI3 1004 aaPredicted RBP19.41■□□□□ 0.7
GSE1-202ENST00000393243 RTL5Q5HYW3 569 aaPredicted RBP19.33■□□□□ 0.69
GSE1-202ENST00000393243 BCANQ96GW7 911 aa19.33■□□□□ 0.68
GSE1-202ENST00000393243 BCL11AQ9H165 835 aa19.29■□□□□ 0.68
GSE1-202ENST00000393243 DIEXFQ68CQ4 756 aaKnown RBP19.17■□□□□ 0.66
GSE1-202ENST00000393243 NEUROD1Q13562 356 aa19.12■□□□□ 0.65
GSE1-202ENST00000393243 FAM50AQ14320 339 aaKnown RBP19.09■□□□□ 0.65
GSE1-202ENST00000393243 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
GSE1-202ENST00000393243 TRIM52Q96A61 297 aa19.03■□□□□ 0.64
GSE1-202ENST00000393243 ZNF326Q5BKZ1 582 aaKnown RBP19.02■□□□□ 0.63
GSE1-202ENST00000393243 GTF3C3Q9Y5Q9 886 aa18.99■□□□□ 0.63
GSE1-202ENST00000393243 ZBTB47Q9UFB7 747 aaPredicted RBP18.85■□□□□ 0.61
GSE1-202ENST00000393243 CDK11AQ9UQ88 783 aaPredicted RBP18.85■□□□□ 0.61
GSE1-202ENST00000393243 CANXP27824 592 aaKnown RBP18.81■□□□□ 0.6
GSE1-202ENST00000393243 NPM2Q86SE8 214 aaKnown RBP18.81■□□□□ 0.6
GSE1-202ENST00000393243 ANP32CO43423 234 aa18.78■□□□□ 0.6
GSE1-202ENST00000393243 EIF5BO60841 1220 aaKnown RBP18.7■□□□□ 0.58
GSE1-202ENST00000393243 ARID3CA6NKF2 412 aa18.7■□□□□ 0.58
GSE1-202ENST00000393243 FBLN2P98095 1184 aa18.61■□□□□ 0.57
GSE1-202ENST00000393243 ANP32AP39687 249 aaKnown RBP18.55■□□□□ 0.56
GSE1-202ENST00000393243 ARXQ96QS3 562 aa18.55■□□□□ 0.56
GSE1-202ENST00000393243 P3H3Q8IVL6 736 aa18.54■□□□□ 0.56
GSE1-202ENST00000393243 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
GSE1-202ENST00000393243 SALL2Q9Y467 1007 aaPredicted RBP18.5■□□□□ 0.55
GSE1-202ENST00000393243 NEFMP07197 916 aa18.48■□□□□ 0.55
GSE1-202ENST00000393243 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
GSE1-202ENST00000393243 FKBP8Q14318 412 aa18.45■□□□□ 0.54
GSE1-202ENST00000393243 HSP90AA1P07900 732 aaKnown RBP18.44■□□□□ 0.54
GSE1-202ENST00000393243 NBR1Q14596 966 aa18.44■□□□□ 0.54
GSE1-202ENST00000393243 ZNF777Q9ULD5 760 aaPredicted RBP18.43■□□□□ 0.54
GSE1-202ENST00000393243 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
GSE1-202ENST00000393243 ANP32BQ92688 251 aaKnown RBP18.35■□□□□ 0.53
GSE1-202ENST00000393243 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
GSE1-202ENST00000393243 CHGAP10645 457 aaKnown RBP18.32■□□□□ 0.52
GSE1-202ENST00000393243 HNRNPUQ00839 825 aaKnown RBP eCLIP18.27■□□□□ 0.52
GSE1-202ENST00000393243 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.51
GSE1-202ENST00000393243 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
GSE1-202ENST00000393243 DDX10Q13206 875 aaKnown RBP18.22■□□□□ 0.51
GSE1-202ENST00000393243 PLEKHG5O94827 1062 aa18.22■□□□□ 0.51
GSE1-202ENST00000393243 UPF2Q9HAU5 1272 aaKnown RBP18.18■□□□□ 0.5
GSE1-202ENST00000393243 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
GSE1-202ENST00000393243 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
GSE1-202ENST00000393243 A0A0G2JS52 829 aa18.14■□□□□ 0.49
GSE1-202ENST00000393243 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
GSE1-202ENST00000393243 HIRIP3Q9BW71 556 aaPredicted RBP18.11■□□□□ 0.49
GSE1-202ENST00000393243 CCDC136Q96JN2 1154 aa18.11■□□□□ 0.49
GSE1-202ENST00000393243 ESF1Q9H501 851 aaKnown RBP18.1■□□□□ 0.49
GSE1-202ENST00000393243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.492e-9■■□□□ 11.9
GSE1-202ENST00000393243 TPRNQ4KMQ1 711 aa18.08■□□□□ 0.49
GSE1-202ENST00000393243 ABCC9O60706 1549 aa18.07■□□□□ 0.48
GSE1-202ENST00000393243 GLIPR1L2Q4G1C9 344 aa18.05■□□□□ 0.48
GSE1-202ENST00000393243 CHIC2Q9UKJ5 165 aa18.05■□□□□ 0.48
GSE1-202ENST00000393243 TONSLQ96HA7 1378 aa18.05■□□□□ 0.48
GSE1-202ENST00000393243 ZBTB7CA1YPR0 619 aa18.05■□□□□ 0.48
GSE1-202ENST00000393243 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
GSE1-202ENST00000393243 TMC1Q8TDI8 760 aa18.03■□□□□ 0.48
GSE1-202ENST00000393243 TULP1O00294 542 aaPredicted RBP17.97■□□□□ 0.47
GSE1-202ENST00000393243 WDR43Q15061 677 aaKnown RBP eCLIP17.96■□□□□ 0.474e-6■■■□□ 15.6
GSE1-202ENST00000393243 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.96■□□□□ 0.47
GSE1-202ENST00000393243 MRS2Q9HD23 443 aa17.92■□□□□ 0.46
GSE1-202ENST00000393243 TAOK2Q9UL54 1235 aa17.9■□□□□ 0.46
GSE1-202ENST00000393243 CDK11BP21127 795 aaKnown RBP17.89■□□□□ 0.46
GSE1-202ENST00000393243 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.46
GSE1-202ENST00000393243 NCLP19338 710 aaKnown RBP17.88■□□□□ 0.45
GSE1-202ENST00000393243 C14orf37Q86TY3 774 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms