RNA–Protein interactions for RNA: ENST00000558094.1

PSMA4-204, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3 BASIC

Gene PSMA4, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-204ENST00000558094 AEBP2Q6ZN18 517 aaPredicted RBP36.96■■■■□ 3.51
PSMA4-204ENST00000558094 CHIC1Q5VXU3 224 aa34.67■■■■□ 3.14
PSMA4-204ENST00000558094 SENP3Q9H4L4 574 aaPredicted RBP31.49■■■□□ 2.63
PSMA4-204ENST00000558094 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.56
PSMA4-204ENST00000558094 FOXD1Q16676 465 aa29.46■■■□□ 2.31
PSMA4-204ENST00000558094 POTEDQ86YR6 584 aa27.7■■■□□ 2.02
PSMA4-204ENST00000558094 MSH5O43196 834 aa27.64■■■□□ 2.02
PSMA4-204ENST00000558094 PLPPR3Q6T4P5 718 aa27.49■■□□□ 1.99
PSMA4-204ENST00000558094 PIAS4Q8N2W9 510 aaPredicted RBP27.42■■□□□ 1.98
PSMA4-204ENST00000558094 PPP6R1Q9UPN7 881 aa27.29■■□□□ 1.96
PSMA4-204ENST00000558094 ADRA2BP18089 450 aa27.17■■□□□ 1.94
PSMA4-204ENST00000558094 MAPK8IP2Q13387 824 aaPredicted RBP25.09■■□□□ 1.61
PSMA4-204ENST00000558094 DMRT2Q9Y5R5 561 aa24.94■■□□□ 1.58
PSMA4-204ENST00000558094 SCAF1Q9H7N4 1312 aaKnown RBP24.74■■□□□ 1.55
PSMA4-204ENST00000558094 PPP4R3CPQ6ZMV5 832 aa24.09■■□□□ 1.45
PSMA4-204ENST00000558094 CACNB1Q02641 598 aaPredicted RBP23.99■■□□□ 1.43
PSMA4-204ENST00000558094 DCAF8L1A6NGE4 600 aa23.96■■□□□ 1.43
PSMA4-204ENST00000558094 HOXD11P31277 338 aaPredicted RBP23.86■■□□□ 1.41
PSMA4-204ENST00000558094 CNKSR2Q8WXI2 1034 aa23.69■■□□□ 1.38
PSMA4-204ENST00000558094 RNF39Q9H2S5 420 aa23.59■■□□□ 1.37
PSMA4-204ENST00000558094 RNF216Q9NWF9 866 aaPredicted RBP23.57■■□□□ 1.36
PSMA4-204ENST00000558094 C1QBPQ07021 282 aaKnown RBP23.18■■□□□ 1.3
PSMA4-204ENST00000558094 DNAJC5BQ9UF47 199 aa23.03■■□□□ 1.28
PSMA4-204ENST00000558094 NCBP3Q53F19 620 aaKnown RBP22.98■■□□□ 1.27
PSMA4-204ENST00000558094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.74■■□□□ 1.233e-11■■■■■ 35.3
PSMA4-204ENST00000558094 NPM3O75607 178 aaKnown RBP22.73■■□□□ 1.23
PSMA4-204ENST00000558094 U3KPZ7 1027 aaPredicted RBP22.26■■□□□ 1.15
PSMA4-204ENST00000558094 SPINK5Q9NQ38 1064 aaPredicted RBP22.08■■□□□ 1.13
PSMA4-204ENST00000558094 CAPN15O75808 1086 aa22.01■■□□□ 1.11
PSMA4-204ENST00000558094 KCNA4P22459 653 aa21.99■■□□□ 1.11
PSMA4-204ENST00000558094 DSG3P32926 999 aa21.98■■□□□ 1.11
PSMA4-204ENST00000558094 SLC4A2P04920 1241 aa21.82■■□□□ 1.08
PSMA4-204ENST00000558094 POTEHQ6S545 545 aa21.61■■□□□ 1.05
PSMA4-204ENST00000558094 TRHP20396 242 aaPredicted RBP21.58■■□□□ 1.05
PSMA4-204ENST00000558094 ABCB7O75027 752 aa21.52■■□□□ 1.04
PSMA4-204ENST00000558094 APLP2Q06481 763 aa21.47■■□□□ 1.03
PSMA4-204ENST00000558094 ZNF219Q9P2Y4 722 aaPredicted RBP21.47■■□□□ 1.03
PSMA4-204ENST00000558094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.38■■□□□ 1.01
PSMA4-204ENST00000558094 HNRNPUL2Q1KMD3 747 aaKnown RBP21.38■■□□□ 1.01
PSMA4-204ENST00000558094 SAMD1Q6SPF0 538 aaPredicted RBP21.28■■□□□ 1
PSMA4-204ENST00000558094 MYCNP04198 464 aaPredicted RBP20.99■□□□□ 0.95
PSMA4-204ENST00000558094 RBM42Q9BTD8 480 aaKnown RBP20.91■□□□□ 0.94
PSMA4-204ENST00000558094 POLA2Q14181 598 aa20.9■□□□□ 0.94
PSMA4-204ENST00000558094 CHRDL2Q6WN34 429 aa20.66■□□□□ 0.9
PSMA4-204ENST00000558094 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
PSMA4-204ENST00000558094 ATF5Q9Y2D1 282 aaPredicted RBP20.63■□□□□ 0.89
PSMA4-204ENST00000558094 FOXD4L1Q9NU39 408 aa20.58■□□□□ 0.89
PSMA4-204ENST00000558094 AKT1S1Q96B36 256 aa20.37■□□□□ 0.85
PSMA4-204ENST00000558094 ZBTB12Q9Y330 459 aaPredicted RBP20.37■□□□□ 0.85
PSMA4-204ENST00000558094 OSCARQ8IYS5 282 aa20.29■□□□□ 0.84
PSMA4-204ENST00000558094 ZBTB22O15209 634 aa20.24■□□□□ 0.83
PSMA4-204ENST00000558094 REM2Q8IYK8 340 aaPredicted RBP20.22■□□□□ 0.83
PSMA4-204ENST00000558094 PIP4P2Q8N4L2 257 aa20.11■□□□□ 0.81
PSMA4-204ENST00000558094 SP7Q8TDD2 431 aaPredicted RBP20.08■□□□□ 0.81
PSMA4-204ENST00000558094 PITPNM1O00562 1244 aa20.03■□□□□ 0.8
PSMA4-204ENST00000558094 ATXN8OSP0DMR3 200 aa19.93■□□□□ 0.78
PSMA4-204ENST00000558094 FXR2P51116 673 aaKnown RBP eCLIP19.9■□□□□ 0.784e-7■□□□□ 8.7
PSMA4-204ENST00000558094 HAX1O00165 279 aa19.83■□□□□ 0.77
PSMA4-204ENST00000558094 SPDYE2BA6NHP3 402 aa19.75■□□□□ 0.75
PSMA4-204ENST00000558094 SPDYE6P0CI01 402 aa19.75■□□□□ 0.75
PSMA4-204ENST00000558094 SPDYE2Q495Y8 402 aa19.75■□□□□ 0.75
PSMA4-204ENST00000558094 FBLN2P98095 1184 aa19.74■□□□□ 0.75
PSMA4-204ENST00000558094 MKRN4PQ13434 485 aaPredicted RBP19.64■□□□□ 0.73
PSMA4-204ENST00000558094 EVX2Q03828 476 aa19.62■□□□□ 0.73
PSMA4-204ENST00000558094 CLEC11AQ9Y240 323 aa19.53■□□□□ 0.72
PSMA4-204ENST00000558094 PRKAR2AP13861 404 aaKnown RBP19.5■□□□□ 0.71
PSMA4-204ENST00000558094 SPDYE1Q8NFV5 336 aaPredicted RBP19.49■□□□□ 0.71
PSMA4-204ENST00000558094 ZNF692Q9BU19 519 aaPredicted RBP19.47■□□□□ 0.71
PSMA4-204ENST00000558094 SSUH2Q9Y2M2 353 aa19.47■□□□□ 0.71
PSMA4-204ENST00000558094 C19orf67A6NJJ6 358 aa19.28■□□□□ 0.68
PSMA4-204ENST00000558094 CHADLQ6NUI6 762 aa19.24■□□□□ 0.67
PSMA4-204ENST00000558094 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
PSMA4-204ENST00000558094 PRR29P0C7W0 189 aa19.12■□□□□ 0.65
PSMA4-204ENST00000558094 GABBR2O75899 941 aa19.11■□□□□ 0.65
PSMA4-204ENST00000558094 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
PSMA4-204ENST00000558094 FARP1Q9Y4F1 1045 aaPredicted RBP18.86■□□□□ 0.61
PSMA4-204ENST00000558094 CD44P16070 742 aaKnown RBP18.85■□□□□ 0.61
PSMA4-204ENST00000558094 LHX8Q68G74 356 aa18.82■□□□□ 0.6
PSMA4-204ENST00000558094 POTEIP0CG38 1075 aa18.73■□□□□ 0.59
PSMA4-204ENST00000558094 CREBZFQ9NS37 354 aa18.6■□□□□ 0.57
PSMA4-204ENST00000558094 CLCN6P51797 869 aa18.54■□□□□ 0.56
PSMA4-204ENST00000558094 ZRANB1Q9UGI0 708 aa18.53■□□□□ 0.56
PSMA4-204ENST00000558094 ZNF579Q8NAF0 562 aaKnown RBP18.52■□□□□ 0.56
PSMA4-204ENST00000558094 STAG3Q9UJ98 1225 aa18.51■□□□□ 0.55
PSMA4-204ENST00000558094 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
PSMA4-204ENST00000558094 DCBLD2Q96PD2 775 aa18.48■□□□□ 0.55
PSMA4-204ENST00000558094 SPDYE4A6NLX3 237 aa18.47■□□□□ 0.55
PSMA4-204ENST00000558094 GALR2O43603 387 aaPredicted RBP18.38■□□□□ 0.53
PSMA4-204ENST00000558094 PHF12Q96QT6 1004 aa18.28■□□□□ 0.52
PSMA4-204ENST00000558094 PAK3O75914 559 aaPredicted RBP18.24■□□□□ 0.51
PSMA4-204ENST00000558094 MNX1P50219 401 aaPredicted RBP18.23■□□□□ 0.51
PSMA4-204ENST00000558094 NPM1P06748 294 aaKnown RBP eCLIP18.17■□□□□ 0.5
PSMA4-204ENST00000558094 POTEB2H3BUK9 544 aa18.12■□□□□ 0.49
PSMA4-204ENST00000558094 OTUD5Q96G74 571 aa18.1■□□□□ 0.49
PSMA4-204ENST00000558094 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
PSMA4-204ENST00000558094 MS4A3Q96HJ5 214 aa18.01■□□□□ 0.47
PSMA4-204ENST00000558094 PROM2Q8N271 834 aa17.97■□□□□ 0.47
PSMA4-204ENST00000558094 PLSCR2Q9NRY7 297 aa17.96■□□□□ 0.47
PSMA4-204ENST00000558094 ASTLQ6HA08 431 aaPredicted RBP17.92■□□□□ 0.46
PSMA4-204ENST00000558094 TSPYL2Q9H2G4 693 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms