RNA–Protein interactions for RNA: ENST00000614132.4

PSMB3-209, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-209ENST00000614132 NISCHQ9Y2I1 1504 aa12.57□□□□□ -0.4
PSMB3-209ENST00000614132 DNAJC5BQ9UF47 199 aa12.52□□□□□ -0.41
PSMB3-209ENST00000614132 ABCC9O60706 1549 aa12.47□□□□□ -0.41
PSMB3-209ENST00000614132 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
PSMB3-209ENST00000614132 CCDC180Q9P1Z9 1646 aa11.55□□□□□ -0.56
PSMB3-209ENST00000614132 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
PSMB3-209ENST00000614132 RB1CC1Q8TDY2 1594 aa11.45□□□□□ -0.58
PSMB3-209ENST00000614132 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
PSMB3-209ENST00000614132 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
PSMB3-209ENST00000614132 NACADO15069 1562 aa11.19□□□□□ -0.62
PSMB3-209ENST00000614132 CC2D2AQ9P2K1 1620 aa11.17□□□□□ -0.62
PSMB3-209ENST00000614132 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
PSMB3-209ENST00000614132 UNC13AQ9UPW8 1703 aa11.09□□□□□ -0.63
PSMB3-209ENST00000614132 CUX2O14529 1486 aa11.08□□□□□ -0.64
PSMB3-209ENST00000614132 DCAF8L2P0C7V8 631 aa11.05□□□□□ -0.64
PSMB3-209ENST00000614132 EIF4G1Q04637 1599 aaKnown RBP10.95□□□□□ -0.66
PSMB3-209ENST00000614132 SHROOM4Q9ULL8 1493 aa10.93□□□□□ -0.66
PSMB3-209ENST00000614132 ERCC6Q03468 1493 aa10.81□□□□□ -0.68
PSMB3-209ENST00000614132 MYO15BQ96JP2 1530 aa10.78□□□□□ -0.68
PSMB3-209ENST00000614132 AEBP2Q6ZN18 517 aaPredicted RBP10.77□□□□□ -0.69
PSMB3-209ENST00000614132 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
PSMB3-209ENST00000614132 ILDR1Q86SU0 546 aaPredicted RBP10.5□□□□□ -0.73
PSMB3-209ENST00000614132 OSCARQ8IYS5 282 aa10.5□□□□□ -0.73
PSMB3-209ENST00000614132 THOC2Q8NI27 1593 aaKnown RBP10.48□□□□□ -0.73
PSMB3-209ENST00000614132 NESP48681 1621 aa10.47□□□□□ -0.73
PSMB3-209ENST00000614132 TRHP20396 242 aaPredicted RBP10.46□□□□□ -0.73
PSMB3-209ENST00000614132 NCAPD3P42695 1498 aa10.39□□□□□ -0.75
PSMB3-209ENST00000614132 BAZ1AQ9NRL2 1556 aaPredicted RBP10.36□□□□□ -0.75
PSMB3-209ENST00000614132 RIMBP3CA6NJZ7 1639 aa10.35□□□□□ -0.75
PSMB3-209ENST00000614132 RIMBP3BA6NNM3 1639 aa10.35□□□□□ -0.75
PSMB3-209ENST00000614132 RIMBP3Q9UFD9 1639 aa10.35□□□□□ -0.75
PSMB3-209ENST00000614132 SMARCA2P51531 1590 aa10.34□□□□□ -0.75
PSMB3-209ENST00000614132 DCAF1Q9Y4B6 1507 aa10.33□□□□□ -0.76
PSMB3-209ENST00000614132 CYB5RLQ6IPT4 315 aa10.31□□□□□ -0.76
PSMB3-209ENST00000614132 ARHGEF11O15085 1522 aa10.27□□□□□ -0.77
PSMB3-209ENST00000614132 PDS5BQ9NTI5 1447 aa10.24□□□□□ -0.77
PSMB3-209ENST00000614132 ZCCHC6Q5VYS8 1495 aaKnown RBP10.23□□□□□ -0.77
PSMB3-209ENST00000614132 ATAD2BQ9ULI0 1458 aa10.23□□□□□ -0.77
PSMB3-209ENST00000614132 LAMC3Q9Y6N6 1575 aa10.22□□□□□ -0.77
PSMB3-209ENST00000614132 KIF21AQ7Z4S6 1674 aa10.21□□□□□ -0.78
PSMB3-209ENST00000614132 MRC2Q9UBG0 1479 aa10.18□□□□□ -0.78
PSMB3-209ENST00000614132 HMGXB3Q12766 1538 aa10.17□□□□□ -0.78
PSMB3-209ENST00000614132 WDR62O43379 1518 aa10.17□□□□□ -0.78
PSMB3-209ENST00000614132 ARAP1Q96P48 1450 aa10.12□□□□□ -0.79
PSMB3-209ENST00000614132 BAZ1BQ9UIG0 1483 aaKnown RBP10.05□□□□□ -0.8
PSMB3-209ENST00000614132 CADPSQ9ULU8 1353 aa10.04□□□□□ -0.8
PSMB3-209ENST00000614132 CEP164Q9UPV0 1460 aa9.97□□□□□ -0.81
PSMB3-209ENST00000614132 KDM4FA0A1W2PPD8 638 aa9.96□□□□□ -0.82
PSMB3-209ENST00000614132 RSF1Q96T23 1441 aaPredicted RBP9.96□□□□□ -0.82
PSMB3-209ENST00000614132 SMARCA4P51532 1647 aa9.94□□□□□ -0.82
PSMB3-209ENST00000614132 FBXO41Q8TF61 875 aa9.91□□□□□ -0.82
PSMB3-209ENST00000614132 FANCD2Q9BXW9 1451 aa9.9□□□□□ -0.83
PSMB3-209ENST00000614132 ZNF608Q9ULD9 1512 aaPredicted RBP9.89□□□□□ -0.83
PSMB3-209ENST00000614132 LMTK3Q96Q04 1460 aa9.87□□□□□ -0.83
PSMB3-209ENST00000614132 SOCS7O14512 581 aa9.87□□□□□ -0.83
PSMB3-209ENST00000614132 PEG3Q9GZU2 1588 aa9.87□□□□□ -0.83
PSMB3-209ENST00000614132 URB2Q14146 1524 aaKnown RBP9.87□□□□□ -0.83
PSMB3-209ENST00000614132 FBLN2P98095 1184 aa9.84□□□□□ -0.83
PSMB3-209ENST00000614132 IFT140Q96RY7 1462 aa9.82□□□□□ -0.84
PSMB3-209ENST00000614132 ILDR2Q71H61 639 aa9.79□□□□□ -0.84
PSMB3-209ENST00000614132 ERCC6L2Q5T890 1561 aa9.79□□□□□ -0.84
PSMB3-209ENST00000614132 CHD1O14646 1710 aa9.77□□□□□ -0.85
PSMB3-209ENST00000614132 CFTRP13569 1480 aa9.73□□□□□ -0.85
PSMB3-209ENST00000614132 EIF4G3O43432 1585 aaKnown RBP9.72□□□□□ -0.85
PSMB3-209ENST00000614132 HECW2Q9P2P5 1572 aa9.72□□□□□ -0.85
PSMB3-209ENST00000614132 AQRO60306 1485 aaKnown RBP eCLIP9.72□□□□□ -0.85
PSMB3-209ENST00000614132 GAPVD1Q14C86 1478 aa9.72□□□□□ -0.85
PSMB3-209ENST00000614132 CLASP1Q7Z460 1538 aa9.72□□□□□ -0.85
PSMB3-209ENST00000614132 MROH2BQ7Z745 1585 aa9.68□□□□□ -0.86
PSMB3-209ENST00000614132 SYNJ2O15056 1496 aa9.66□□□□□ -0.86
PSMB3-209ENST00000614132 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.86
PSMB3-209ENST00000614132 CHMP7Q8WUX9 453 aaPredicted RBP9.64□□□□□ -0.87
PSMB3-209ENST00000614132 FAM69CQ0P6D2 419 aa9.62□□□□□ -0.87
PSMB3-209ENST00000614132 SYNJ1O43426 1573 aa9.62□□□□□ -0.87
PSMB3-209ENST00000614132 KIF13AQ9H1H9 1805 aa9.61□□□□□ -0.87
PSMB3-209ENST00000614132 TOPBP1Q92547 1522 aa9.61□□□□□ -0.87
PSMB3-209ENST00000614132 ADGRL1O94910 1474 aa9.6□□□□□ -0.87
PSMB3-209ENST00000614132 KDM6BO15054 1643 aa9.57□□□□□ -0.88
PSMB3-209ENST00000614132 SNAPC4Q5SXM2 1469 aa9.56□□□□□ -0.88
PSMB3-209ENST00000614132 TARBP1Q13395 1621 aaKnown RBP9.56□□□□□ -0.88
PSMB3-209ENST00000614132 ABCC10Q5T3U5 1492 aa9.55□□□□□ -0.88
PSMB3-209ENST00000614132 TDRD9Q8NDG6 1382 aaKnown RBP9.54□□□□□ -0.88
PSMB3-209ENST00000614132 ABCC8Q09428 1581 aa9.54□□□□□ -0.88
PSMB3-209ENST00000614132 MAGI1Q96QZ7 1491 aaPredicted RBP9.49□□□□□ -0.89
PSMB3-209ENST00000614132 WIZO95785 1651 aa9.48□□□□□ -0.89
PSMB3-209ENST00000614132 POLA1P09884 1462 aaPredicted RBP9.47□□□□□ -0.89
PSMB3-209ENST00000614132 RAD54L2Q9Y4B4 1467 aa9.47□□□□□ -0.89
PSMB3-209ENST00000614132 DNMBPQ6XZF7 1577 aa9.46□□□□□ -0.89
PSMB3-209ENST00000614132 DIP2BQ9P265 1576 aa9.45□□□□□ -0.9
PSMB3-209ENST00000614132 NPM1P06748 294 aaKnown RBP eCLIP9.44□□□□□ -0.9
PSMB3-209ENST00000614132 SOGA1O94964 1423 aa9.44□□□□□ -0.9
PSMB3-209ENST00000614132 GRIN2BQ13224 1484 aa9.43□□□□□ -0.9
PSMB3-209ENST00000614132 MAPKBP1O60336 1514 aa9.41□□□□□ -0.9
PSMB3-209ENST00000614132 CERKQ8TCT0 537 aa9.4□□□□□ -0.9
PSMB3-209ENST00000614132 CEP170Q5SW79 1584 aa9.4□□□□□ -0.9
PSMB3-209ENST00000614132 SPATA31D1Q6ZQQ2 1576 aa9.4□□□□□ -0.9
PSMB3-209ENST00000614132 PRDM2Q13029 1718 aa9.39□□□□□ -0.91
PSMB3-209ENST00000614132 WDR97A6NE52 1622 aa9.38□□□□□ -0.91
PSMB3-209ENST00000614132 TSPOAP1O95153 1857 aa9.36□□□□□ -0.91
PSMB3-209ENST00000614132 COL17A1Q9UMD9 1497 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms