RNA–Protein interactions for RNA: ENST00000555873.1

TMED10-204, Transcript of transmembrane p24 trafficking protein 10, humanhuman

TSL 1 (best)

Gene TMED10, Length 1,161 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED10-204ENST00000555873 NISCHQ9Y2I1 1504 aa31.92■■■□□ 2.7
TMED10-204ENST00000555873 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
TMED10-204ENST00000555873 ABCC9O60706 1549 aa27.66■■■□□ 2.02
TMED10-204ENST00000555873 DCAF8L2P0C7V8 631 aa26.71■■□□□ 1.87
TMED10-204ENST00000555873 ZCCHC6Q5VYS8 1495 aaKnown RBP26.61■■□□□ 1.85
TMED10-204ENST00000555873 NACADO15069 1562 aa26.56■■□□□ 1.84
TMED10-204ENST00000555873 RB1CC1Q8TDY2 1594 aa26.54■■□□□ 1.84
TMED10-204ENST00000555873 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
TMED10-204ENST00000555873 DCAF1Q9Y4B6 1507 aa26.37■■□□□ 1.81
TMED10-204ENST00000555873 PABPN1Q86U42 306 aaKnown RBP eCLIP25.95■■□□□ 1.74
TMED10-204ENST00000555873 UNC13AQ9UPW8 1703 aa25.9■■□□□ 1.74
TMED10-204ENST00000555873 SCRIBQ14160 1630 aa25.84■■□□□ 1.73
TMED10-204ENST00000555873 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
TMED10-204ENST00000555873 SHROOM4Q9ULL8 1493 aa25.45■■□□□ 1.66
TMED10-204ENST00000555873 DNAJC5BQ9UF47 199 aa25.43■■□□□ 1.66
TMED10-204ENST00000555873 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
TMED10-204ENST00000555873 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
TMED10-204ENST00000555873 CECR2Q9BXF3 1484 aa24.93■■□□□ 1.58
TMED10-204ENST00000555873 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
TMED10-204ENST00000555873 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
TMED10-204ENST00000555873 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
TMED10-204ENST00000555873 ATAD2BQ9ULI0 1458 aa24.61■■□□□ 1.53
TMED10-204ENST00000555873 NCAPD3P42695 1498 aa24.58■■□□□ 1.52
TMED10-204ENST00000555873 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
TMED10-204ENST00000555873 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
TMED10-204ENST00000555873 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
TMED10-204ENST00000555873 HMGXB3Q12766 1538 aa24.39■■□□□ 1.49
TMED10-204ENST00000555873 BAZ1BQ9UIG0 1483 aaKnown RBP24.37■■□□□ 1.49
TMED10-204ENST00000555873 WIZO95785 1651 aa24.33■■□□□ 1.49
TMED10-204ENST00000555873 TOP2AP11388 1531 aaKnown RBP24.06■■□□□ 1.44
TMED10-204ENST00000555873 NESP48681 1621 aa23.99■■□□□ 1.43
TMED10-204ENST00000555873 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
TMED10-204ENST00000555873 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
TMED10-204ENST00000555873 CCDC88BA6NC98 1476 aa23.86■■□□□ 1.41
TMED10-204ENST00000555873 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
TMED10-204ENST00000555873 ERCC6Q03468 1493 aa23.78■■□□□ 1.4
TMED10-204ENST00000555873 CFTRP13569 1480 aa23.74■■□□□ 1.39
TMED10-204ENST00000555873 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
TMED10-204ENST00000555873 KIF21AQ7Z4S6 1674 aa23.58■■□□□ 1.37
TMED10-204ENST00000555873 FANCD2Q9BXW9 1451 aa23.58■■□□□ 1.37
TMED10-204ENST00000555873 THOC2Q8NI27 1593 aaKnown RBP23.51■■□□□ 1.35
TMED10-204ENST00000555873 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
TMED10-204ENST00000555873 CUX2O14529 1486 aa23.47■■□□□ 1.35
TMED10-204ENST00000555873 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
TMED10-204ENST00000555873 WDR62O43379 1518 aa23.38■■□□□ 1.33
TMED10-204ENST00000555873 PRDM2Q13029 1718 aa23.37■■□□□ 1.33
TMED10-204ENST00000555873 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
TMED10-204ENST00000555873 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
TMED10-204ENST00000555873 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
TMED10-204ENST00000555873 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.3
TMED10-204ENST00000555873 CUX1P39880 1505 aa23.09■■□□□ 1.29
TMED10-204ENST00000555873 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
TMED10-204ENST00000555873 IFT140Q96RY7 1462 aa23.03■■□□□ 1.28
TMED10-204ENST00000555873 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
TMED10-204ENST00000555873 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
TMED10-204ENST00000555873 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
TMED10-204ENST00000555873 WRNQ14191 1432 aaPredicted RBP eCLIP22.97■■□□□ 1.27
TMED10-204ENST00000555873 SOGA1O94964 1423 aa22.96■■□□□ 1.27
TMED10-204ENST00000555873 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
TMED10-204ENST00000555873 SYNJ1O43426 1573 aa22.9■■□□□ 1.26
TMED10-204ENST00000555873 TOP2BQ02880 1626 aa22.86■■□□□ 1.25
TMED10-204ENST00000555873 AQRO60306 1485 aaKnown RBP eCLIP22.86■■□□□ 1.253e-6■■■■■ 29.6
TMED10-204ENST00000555873 TDRD9Q8NDG6 1382 aaKnown RBP22.85■■□□□ 1.25
TMED10-204ENST00000555873 BIVM-ERCC5R4GMW8 1640 aa22.83■■□□□ 1.25
TMED10-204ENST00000555873 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
TMED10-204ENST00000555873 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
TMED10-204ENST00000555873 DNAJC5Q9H3Z4 198 aa22.74■■□□□ 1.23
TMED10-204ENST00000555873 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
TMED10-204ENST00000555873 GAPVD1Q14C86 1478 aa22.66■■□□□ 1.22
TMED10-204ENST00000555873 GRIN2BQ13224 1484 aa22.64■■□□□ 1.21
TMED10-204ENST00000555873 ABCA5Q8WWZ7 1642 aa22.62■■□□□ 1.21
TMED10-204ENST00000555873 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
TMED10-204ENST00000555873 OSCARQ8IYS5 282 aa22.59■■□□□ 1.21
TMED10-204ENST00000555873 FBLN2P98095 1184 aa22.56■■□□□ 1.2
TMED10-204ENST00000555873 TRIM41Q8WV44 630 aa22.54■■□□□ 1.2
TMED10-204ENST00000555873 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
TMED10-204ENST00000555873 CHMP7Q8WUX9 453 aaPredicted RBP22.51■■□□□ 1.19
TMED10-204ENST00000555873 PBRM1Q86U86 1689 aa22.51■■□□□ 1.19
TMED10-204ENST00000555873 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
TMED10-204ENST00000555873 KIF27Q86VH2 1401 aa22.47■■□□□ 1.19
TMED10-204ENST00000555873 IGF1RP08069 1367 aa22.45■■□□□ 1.18
TMED10-204ENST00000555873 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
TMED10-204ENST00000555873 CHD1O14646 1710 aa22.44■■□□□ 1.18
TMED10-204ENST00000555873 FHAD1B1AJZ9 1412 aa22.41■■□□□ 1.18
TMED10-204ENST00000555873 RUSC2Q8N2Y8 1516 aa22.4■■□□□ 1.18
TMED10-204ENST00000555873 ADAMTS12P58397 1594 aa22.39■■□□□ 1.18
TMED10-204ENST00000555873 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
TMED10-204ENST00000555873 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
TMED10-204ENST00000555873 CLASP1Q7Z460 1538 aa22.28■■□□□ 1.16
TMED10-204ENST00000555873 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
TMED10-204ENST00000555873 NUP160Q12769 1436 aa22.26■■□□□ 1.15
TMED10-204ENST00000555873 CEP170Q5SW79 1584 aa22.24■■□□□ 1.15
TMED10-204ENST00000555873 CUL7Q14999 1698 aa22.21■■□□□ 1.15
TMED10-204ENST00000555873 ARHGEF11O15085 1522 aa22.18■■□□□ 1.14
TMED10-204ENST00000555873 RIMBP3CA6NJZ7 1639 aa22.16■■□□□ 1.14
TMED10-204ENST00000555873 RIMBP3BA6NNM3 1639 aa22.16■■□□□ 1.14
TMED10-204ENST00000555873 RIMBP3Q9UFD9 1639 aa22.16■■□□□ 1.14
TMED10-204ENST00000555873 CSRNP3Q8WYN3 585 aa22.13■■□□□ 1.13
TMED10-204ENST00000555873 RAPGEF2Q9Y4G8 1499 aa22.12■■□□□ 1.13
TMED10-204ENST00000555873 FAM9AQ8IZU1 332 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms