RNA–Protein interactions for RNA: ENST00000411612.5

GSE1-204, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-204ENST00000411612 NISCHQ9Y2I1 1504 aa53.54■■■■■ 6.16
GSE1-204ENST00000411612 CCDC180Q9P1Z9 1646 aa47.75■■■■■ 5.23
GSE1-204ENST00000411612 ABCC9O60706 1549 aa46.88■■■■■ 5.09
GSE1-204ENST00000411612 RB1CC1Q8TDY2 1594 aa45.08■■■■■ 4.81
GSE1-204ENST00000411612 NACADO15069 1562 aa45.01■■■■■ 4.8
GSE1-204ENST00000411612 MYO15BQ96JP2 1530 aa44.75■■■■■ 4.75
GSE1-204ENST00000411612 DCAF8L2P0C7V8 631 aa44.69■■■■■ 4.74
GSE1-204ENST00000411612 ZCCHC6Q5VYS8 1495 aaKnown RBP44.53■■■■■ 4.72
GSE1-204ENST00000411612 DCAF1Q9Y4B6 1507 aa44.4■■■■■ 4.7
GSE1-204ENST00000411612 UNC13AQ9UPW8 1703 aa43.95■■■■■ 4.63
GSE1-204ENST00000411612 PABPN1Q86U42 306 aaKnown RBP eCLIP43.74■■■■■ 4.59
GSE1-204ENST00000411612 BICRAQ9NZM4 1560 aa43.71■■■■■ 4.59
GSE1-204ENST00000411612 SHROOM4Q9ULL8 1493 aa43.38■■■■■ 4.54
GSE1-204ENST00000411612 SCRIBQ14160 1630 aa43.37■■■■■ 4.53
GSE1-204ENST00000411612 DNAJC5BQ9UF47 199 aa43.36■■■■■ 4.53
GSE1-204ENST00000411612 EIF4G1Q04637 1599 aaKnown RBP42.56■■■■■ 4.4
GSE1-204ENST00000411612 CC2D2AQ9P2K1 1620 aa42.44■■■■■ 4.38
GSE1-204ENST00000411612 CECR2Q9BXF3 1484 aa42.23■■■■■ 4.35
GSE1-204ENST00000411612 SMARCA4P51532 1647 aa41.57■■■■■ 4.25
GSE1-204ENST00000411612 NCAPD3P42695 1498 aa41.56■■■■■ 4.24
GSE1-204ENST00000411612 BAZ1AQ9NRL2 1556 aaPredicted RBP41.52■■■■■ 4.24
GSE1-204ENST00000411612 ATAD2BQ9ULI0 1458 aa41.46■■■■■ 4.23
GSE1-204ENST00000411612 SMARCA2P51531 1590 aa41.42■■■■■ 4.22
GSE1-204ENST00000411612 HMGXB3Q12766 1538 aa41.28■■■■■ 4.2
GSE1-204ENST00000411612 PEG3Q9GZU2 1588 aa41.28■■■■■ 4.2
GSE1-204ENST00000411612 MROH2BQ7Z745 1585 aa41.19■■■■■ 4.18
GSE1-204ENST00000411612 BAZ1BQ9UIG0 1483 aaKnown RBP41.06■■■■■ 4.16
GSE1-204ENST00000411612 WIZO95785 1651 aa40.68■■■■■ 4.1
GSE1-204ENST00000411612 RSF1Q96T23 1441 aaPredicted RBP40.67■■■■■ 4.1
GSE1-204ENST00000411612 NESP48681 1621 aa40.47■■■■■ 4.07
GSE1-204ENST00000411612 LAMC3Q9Y6N6 1575 aa40.46■■■■■ 4.07
GSE1-204ENST00000411612 ERCC6Q03468 1493 aa40.45■■■■■ 4.07
GSE1-204ENST00000411612 TOP2AP11388 1531 aaKnown RBP40.32■■■■■ 4.04
GSE1-204ENST00000411612 CADPSQ9ULU8 1353 aa40.29■■■■■ 4.04
GSE1-204ENST00000411612 CUX2O14529 1486 aa40.26■■■■■ 4.04
GSE1-204ENST00000411612 PDS5BQ9NTI5 1447 aa40.22■■■■■ 4.03
GSE1-204ENST00000411612 CFTRP13569 1480 aa40■■■■□ 3.99
GSE1-204ENST00000411612 KIF21AQ7Z4S6 1674 aa39.98■■■■□ 3.99
GSE1-204ENST00000411612 THOC2Q8NI27 1593 aaKnown RBP39.97■■■■□ 3.99
GSE1-204ENST00000411612 CCDC88BA6NC98 1476 aa39.84■■■■□ 3.97
GSE1-204ENST00000411612 FANCD2Q9BXW9 1451 aa39.76■■■■□ 3.96
GSE1-204ENST00000411612 MRC2Q9UBG0 1479 aa39.76■■■■□ 3.96
GSE1-204ENST00000411612 CEP164Q9UPV0 1460 aa39.75■■■■□ 3.95
GSE1-204ENST00000411612 WDR62O43379 1518 aa39.66■■■■□ 3.94
GSE1-204ENST00000411612 PRDM2Q13029 1718 aa39.57■■■■□ 3.93
GSE1-204ENST00000411612 DNAJC5Q9H3Z4 198 aa39.4■■■■□ 3.9
GSE1-204ENST00000411612 URB2Q14146 1524 aaKnown RBP39.37■■■■□ 3.89
GSE1-204ENST00000411612 SUPT5HO00267 1087 aaKnown RBP39.24■■■■□ 3.87
GSE1-204ENST00000411612 ABCC8Q09428 1581 aa39.2■■■■□ 3.87
GSE1-204ENST00000411612 TOPBP1Q92547 1522 aa39.09■■■■□ 3.85
GSE1-204ENST00000411612 DNMBPQ6XZF7 1577 aa39.03■■■■□ 3.84
GSE1-204ENST00000411612 IFT140Q96RY7 1462 aa38.98■■■■□ 3.83
GSE1-204ENST00000411612 POLA1P09884 1462 aaPredicted RBP38.74■■■■□ 3.79
GSE1-204ENST00000411612 ZNF608Q9ULD9 1512 aaPredicted RBP38.72■■■■□ 3.79
GSE1-204ENST00000411612 TARBP1Q13395 1621 aaKnown RBP38.71■■■■□ 3.79
GSE1-204ENST00000411612 CUX1P39880 1505 aa38.67■■■■□ 3.78
GSE1-204ENST00000411612 SOGA1O94964 1423 aa38.6■■■■□ 3.77
GSE1-204ENST00000411612 FGD5Q6ZNL6 1462 aa38.57■■■■□ 3.76
GSE1-204ENST00000411612 EIF4G3O43432 1585 aaKnown RBP38.56■■■■□ 3.76
GSE1-204ENST00000411612 OSCARQ8IYS5 282 aa38.53■■■■□ 3.76
GSE1-204ENST00000411612 RAD54L2Q9Y4B4 1467 aa38.52■■■■□ 3.76
GSE1-204ENST00000411612 WDR97A6NE52 1622 aa38.49■■■■□ 3.75
GSE1-204ENST00000411612 AQRO60306 1485 aaKnown RBP eCLIP38.48■■■■□ 3.751e-9■■■■■ 32.1
GSE1-204ENST00000411612 TDRD9Q8NDG6 1382 aaKnown RBP38.36■■■■□ 3.73
GSE1-204ENST00000411612 WRNQ14191 1432 aaPredicted RBP eCLIP38.33■■■■□ 3.733e-6■■■■□ 26.6
GSE1-204ENST00000411612 TOP2BQ02880 1626 aa38.29■■■■□ 3.72
GSE1-204ENST00000411612 BIVM-ERCC5R4GMW8 1640 aa38.27■■■■□ 3.72
GSE1-204ENST00000411612 ABCA10Q8WWZ4 1543 aa38.27■■■■□ 3.72
GSE1-204ENST00000411612 GRIN2BQ13224 1484 aa38.2■■■■□ 3.71
GSE1-204ENST00000411612 SYNJ1O43426 1573 aa38.19■■■■□ 3.7
GSE1-204ENST00000411612 MAGI1Q96QZ7 1491 aaPredicted RBP38.15■■■■□ 3.7
GSE1-204ENST00000411612 GAPVD1Q14C86 1478 aa38.15■■■■□ 3.7
GSE1-204ENST00000411612 SNAPC4Q5SXM2 1469 aa38.11■■■■□ 3.69
GSE1-204ENST00000411612 CHD1O14646 1710 aa38.09■■■■□ 3.69
GSE1-204ENST00000411612 ABCA5Q8WWZ7 1642 aa38.09■■■■□ 3.69
GSE1-204ENST00000411612 FBLN2P98095 1184 aa38.03■■■■□ 3.68
GSE1-204ENST00000411612 PBRM1Q86U86 1689 aa37.99■■■■□ 3.67
GSE1-204ENST00000411612 SYNJ2O15056 1496 aa37.99■■■■□ 3.67
GSE1-204ENST00000411612 CHMP7Q8WUX9 453 aaPredicted RBP37.97■■■■□ 3.67
GSE1-204ENST00000411612 RIMBP3CA6NJZ7 1639 aa37.83■■■■□ 3.65
GSE1-204ENST00000411612 RIMBP3BA6NNM3 1639 aa37.83■■■■□ 3.65
GSE1-204ENST00000411612 RIMBP3Q9UFD9 1639 aa37.83■■■■□ 3.65
GSE1-204ENST00000411612 ARHGEF11O15085 1522 aa37.83■■■■□ 3.65
GSE1-204ENST00000411612 ERICH3Q5RHP9 1530 aa37.82■■■■□ 3.64
GSE1-204ENST00000411612 CLASP1Q7Z460 1538 aa37.78■■■■□ 3.64
GSE1-204ENST00000411612 TRIM41Q8WV44 630 aa37.76■■■■□ 3.64
GSE1-204ENST00000411612 FHAD1B1AJZ9 1412 aa37.72■■■■□ 3.63
GSE1-204ENST00000411612 ADAMTS12P58397 1594 aa37.72■■■■□ 3.63
GSE1-204ENST00000411612 GRIN2AQ12879 1464 aa37.69■■■■□ 3.62
GSE1-204ENST00000411612 KIF27Q86VH2 1401 aa37.59■■■■□ 3.61
GSE1-204ENST00000411612 NUP160Q12769 1436 aa37.58■■■■□ 3.61
GSE1-204ENST00000411612 IGF1RP08069 1367 aa37.49■■■■□ 3.59
GSE1-204ENST00000411612 ARAP1Q96P48 1450 aa37.49■■■■□ 3.59
GSE1-204ENST00000411612 CYB5RLQ6IPT4 315 aa37.48■■■■□ 3.59
GSE1-204ENST00000411612 CEP170Q5SW79 1584 aa37.46■■■■□ 3.59
GSE1-204ENST00000411612 CUL7Q14999 1698 aa37.36■■■■□ 3.57
GSE1-204ENST00000411612 SHROOM2Q13796 1616 aa37.31■■■■□ 3.56
GSE1-204ENST00000411612 CARMIL1Q5VZK9 1371 aa37.23■■■■□ 3.55
GSE1-204ENST00000411612 JPH4Q96JJ6 628 aa37.18■■■■□ 3.54
GSE1-204ENST00000411612 RUSC2Q8N2Y8 1516 aa37.17■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms