RNA–Protein interactions for RNA: ENST00000556969.5

TMED10-205, Transcript of transmembrane p24 trafficking protein 10, humanhuman

TSL 2

Gene TMED10, Length 1,314 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED10-205ENST00000556969 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
TMED10-205ENST00000556969 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
TMED10-205ENST00000556969 SENP3Q9H4L4 574 aaPredicted RBP17.43■□□□□ 0.38
TMED10-205ENST00000556969 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.36
TMED10-205ENST00000556969 FOXD1Q16676 465 aa16.33■□□□□ 0.2
TMED10-205ENST00000556969 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
TMED10-205ENST00000556969 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
TMED10-205ENST00000556969 ADRA2BP18089 450 aa15.29■□□□□ 0.04
TMED10-205ENST00000556969 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
TMED10-205ENST00000556969 MSH5O43196 834 aa15.11■□□□□ 0.01
TMED10-205ENST00000556969 POTEDQ86YR6 584 aa15.02■□□□□ -0
TMED10-205ENST00000556969 KCNA4P22459 653 aa14.75□□□□□ -0.05
TMED10-205ENST00000556969 EHMT2Q96KQ7 1210 aa14.52□□□□□ -0.08
TMED10-205ENST00000556969 PPP4R3CPQ6ZMV5 832 aa14.41□□□□□ -0.1
TMED10-205ENST00000556969 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
TMED10-205ENST00000556969 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
TMED10-205ENST00000556969 MAPK8IP2Q13387 824 aaPredicted RBP14.04□□□□□ -0.16
TMED10-205ENST00000556969 CSRNP3Q8WYN3 585 aa14.01□□□□□ -0.17
TMED10-205ENST00000556969 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
TMED10-205ENST00000556969 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
TMED10-205ENST00000556969 DMRT2Q9Y5R5 561 aa13.9□□□□□ -0.19
TMED10-205ENST00000556969 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
TMED10-205ENST00000556969 ZBTB22O15209 634 aa13.55□□□□□ -0.24
TMED10-205ENST00000556969 HOXD11P31277 338 aaPredicted RBP13.48□□□□□ -0.25
TMED10-205ENST00000556969 DNAJC5BQ9UF47 199 aa13.48□□□□□ -0.25
TMED10-205ENST00000556969 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
TMED10-205ENST00000556969 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
TMED10-205ENST00000556969 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
TMED10-205ENST00000556969 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
TMED10-205ENST00000556969 RNF39Q9H2S5 420 aa13□□□□□ -0.33
TMED10-205ENST00000556969 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
TMED10-205ENST00000556969 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
TMED10-205ENST00000556969 CACNB1Q02641 598 aaPredicted RBP12.85□□□□□ -0.35
TMED10-205ENST00000556969 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
TMED10-205ENST00000556969 FKBP8Q14318 412 aa12.67□□□□□ -0.38
TMED10-205ENST00000556969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.383e-6■□□□□ 9.1
TMED10-205ENST00000556969 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
TMED10-205ENST00000556969 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
TMED10-205ENST00000556969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.56□□□□□ -0.4
TMED10-205ENST00000556969 HNRNPUL2Q1KMD3 747 aaKnown RBP12.56□□□□□ -0.4
TMED10-205ENST00000556969 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
TMED10-205ENST00000556969 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
TMED10-205ENST00000556969 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
TMED10-205ENST00000556969 NISCHQ9Y2I1 1504 aa12.47□□□□□ -0.41
TMED10-205ENST00000556969 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
TMED10-205ENST00000556969 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
TMED10-205ENST00000556969 APLP2Q06481 763 aa12.29□□□□□ -0.44
TMED10-205ENST00000556969 ZNF219Q9P2Y4 722 aaPredicted RBP12.27□□□□□ -0.45
TMED10-205ENST00000556969 DSG3P32926 999 aa12.21□□□□□ -0.45
TMED10-205ENST00000556969 CAPN15O75808 1086 aa12.15□□□□□ -0.46
TMED10-205ENST00000556969 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
TMED10-205ENST00000556969 FBXO3Q9UK99 471 aa12.06□□□□□ -0.48
TMED10-205ENST00000556969 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
TMED10-205ENST00000556969 FBLN2P98095 1184 aa12.01□□□□□ -0.49
TMED10-205ENST00000556969 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
TMED10-205ENST00000556969 ABCB7O75027 752 aa11.93□□□□□ -0.5
TMED10-205ENST00000556969 POLA2Q14181 598 aa11.93□□□□□ -0.5
TMED10-205ENST00000556969 PROM2Q8N271 834 aa11.89□□□□□ -0.51
TMED10-205ENST00000556969 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
TMED10-205ENST00000556969 ZBTB12Q9Y330 459 aaPredicted RBP11.77□□□□□ -0.53
TMED10-205ENST00000556969 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
TMED10-205ENST00000556969 DCAF8L2P0C7V8 631 aa11.7□□□□□ -0.54
TMED10-205ENST00000556969 PLCB2Q00722 1185 aa11.61□□□□□ -0.55
TMED10-205ENST00000556969 POTEHQ6S545 545 aa11.6□□□□□ -0.55
TMED10-205ENST00000556969 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
TMED10-205ENST00000556969 ZNF692Q9BU19 519 aaPredicted RBP11.6□□□□□ -0.55
TMED10-205ENST00000556969 PKD2Q13563 968 aa11.55□□□□□ -0.56
TMED10-205ENST00000556969 HAP1P54257 671 aaPredicted RBP11.53□□□□□ -0.56
TMED10-205ENST00000556969 SPOCK2Q92563 424 aa11.51□□□□□ -0.57
TMED10-205ENST00000556969 RBM42Q9BTD8 480 aaKnown RBP11.51□□□□□ -0.57
TMED10-205ENST00000556969 STAG3Q9UJ98 1225 aa11.51□□□□□ -0.57
TMED10-205ENST00000556969 SPDYE2BA6NHP3 402 aa11.49□□□□□ -0.57
TMED10-205ENST00000556969 SPDYE6P0CI01 402 aa11.49□□□□□ -0.57
TMED10-205ENST00000556969 SPDYE2Q495Y8 402 aa11.49□□□□□ -0.57
TMED10-205ENST00000556969 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
TMED10-205ENST00000556969 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
TMED10-205ENST00000556969 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
TMED10-205ENST00000556969 PABPN1Q86U42 306 aaKnown RBP eCLIP11.44□□□□□ -0.58
TMED10-205ENST00000556969 MIER1Q8N108 512 aa11.43□□□□□ -0.58
TMED10-205ENST00000556969 SSUH2Q9Y2M2 353 aa11.43□□□□□ -0.58
TMED10-205ENST00000556969 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
TMED10-205ENST00000556969 PLEKHG5O94827 1062 aa11.35□□□□□ -0.59
TMED10-205ENST00000556969 AKT1S1Q96B36 256 aa11.35□□□□□ -0.59
TMED10-205ENST00000556969 BBXQ8WY36 941 aaPredicted RBP11.34□□□□□ -0.59
TMED10-205ENST00000556969 VSIG10Q8N0Z9 540 aa11.32□□□□□ -0.6
TMED10-205ENST00000556969 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
TMED10-205ENST00000556969 PAXIP1Q6ZW49 1069 aaPredicted RBP11.28□□□□□ -0.6
TMED10-205ENST00000556969 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
TMED10-205ENST00000556969 CIZ1Q9ULV3 898 aaPredicted RBP11.28□□□□□ -0.6
TMED10-205ENST00000556969 CHRDL2Q6WN34 429 aa11.27□□□□□ -0.61
TMED10-205ENST00000556969 RGL2O15211 777 aa11.26□□□□□ -0.61
TMED10-205ENST00000556969 NPM1P06748 294 aaKnown RBP eCLIP11.26□□□□□ -0.61
TMED10-205ENST00000556969 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
TMED10-205ENST00000556969 BCANQ96GW7 911 aa11.26□□□□□ -0.61
TMED10-205ENST00000556969 SPRYD3Q8NCJ5 442 aa11.18□□□□□ -0.62
TMED10-205ENST00000556969 CHGAP10645 457 aaKnown RBP11.16□□□□□ -0.62
TMED10-205ENST00000556969 PITPNM1O00562 1244 aa11.13□□□□□ -0.63
TMED10-205ENST00000556969 TRIM41Q8WV44 630 aa11.12□□□□□ -0.63
TMED10-205ENST00000556969 KDM2AQ9Y2K7 1162 aa11.12□□□□□ -0.63
TMED10-205ENST00000556969 GSE1Q14687 1217 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms