RNA–Protein interactions for RNA: ENST00000577250.1

RIOK3-202, Transcript of RIO kinase 3, humanhuman

TSL 3

Gene RIOK3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-202ENST00000577250 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
RIOK3-202ENST00000577250 ABCC9O60706 1549 aa21.49■■□□□ 1.03
RIOK3-202ENST00000577250 CCDC180Q9P1Z9 1646 aa21.3■■□□□ 1
RIOK3-202ENST00000577250 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
RIOK3-202ENST00000577250 DCAF8L2P0C7V8 631 aa20.34■□□□□ 0.85
RIOK3-202ENST00000577250 NACADO15069 1562 aa20.21■□□□□ 0.83
RIOK3-202ENST00000577250 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
RIOK3-202ENST00000577250 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
RIOK3-202ENST00000577250 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
RIOK3-202ENST00000577250 UNC13AQ9UPW8 1703 aa19.78■□□□□ 0.76
RIOK3-202ENST00000577250 BICRAQ9NZM4 1560 aa19.72■□□□□ 0.75
RIOK3-202ENST00000577250 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
RIOK3-202ENST00000577250 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
RIOK3-202ENST00000577250 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
RIOK3-202ENST00000577250 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
RIOK3-202ENST00000577250 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
RIOK3-202ENST00000577250 CC2D2AQ9P2K1 1620 aa19.34■□□□□ 0.69
RIOK3-202ENST00000577250 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
RIOK3-202ENST00000577250 NCAPD3P42695 1498 aa18.68■□□□□ 0.58
RIOK3-202ENST00000577250 ATAD2BQ9ULI0 1458 aa18.63■□□□□ 0.57
RIOK3-202ENST00000577250 ERCC6Q03468 1493 aa18.59■□□□□ 0.57
RIOK3-202ENST00000577250 DNAJC5Q9H3Z4 198 aa18.58■□□□□ 0.56
RIOK3-202ENST00000577250 SMARCA2P51531 1590 aa18.57■□□□□ 0.56
RIOK3-202ENST00000577250 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
RIOK3-202ENST00000577250 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
RIOK3-202ENST00000577250 CUX2O14529 1486 aa18.5■□□□□ 0.55
RIOK3-202ENST00000577250 BAZ1AQ9NRL2 1556 aaPredicted RBP18.49■□□□□ 0.55
RIOK3-202ENST00000577250 BAZ1BQ9UIG0 1483 aaKnown RBP18.48■□□□□ 0.55
RIOK3-202ENST00000577250 NESP48681 1621 aa18.41■□□□□ 0.54
RIOK3-202ENST00000577250 MROH2BQ7Z745 1585 aa18.35■□□□□ 0.53
RIOK3-202ENST00000577250 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
RIOK3-202ENST00000577250 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
RIOK3-202ENST00000577250 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
RIOK3-202ENST00000577250 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
RIOK3-202ENST00000577250 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
RIOK3-202ENST00000577250 WIZO95785 1651 aa18.1■□□□□ 0.49
RIOK3-202ENST00000577250 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
RIOK3-202ENST00000577250 MRC2Q9UBG0 1479 aa18.03■□□□□ 0.48
RIOK3-202ENST00000577250 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
RIOK3-202ENST00000577250 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.47
RIOK3-202ENST00000577250 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
RIOK3-202ENST00000577250 WDR62O43379 1518 aa17.93■□□□□ 0.46
RIOK3-202ENST00000577250 CFTRP13569 1480 aa17.9■□□□□ 0.46
RIOK3-202ENST00000577250 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
RIOK3-202ENST00000577250 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
RIOK3-202ENST00000577250 URB2Q14146 1524 aaKnown RBP17.76■□□□□ 0.43
RIOK3-202ENST00000577250 OSCARQ8IYS5 282 aa17.75■□□□□ 0.43
RIOK3-202ENST00000577250 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
RIOK3-202ENST00000577250 IFT140Q96RY7 1462 aa17.61■□□□□ 0.41
RIOK3-202ENST00000577250 PRDM2Q13029 1718 aa17.58■□□□□ 0.41
RIOK3-202ENST00000577250 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
RIOK3-202ENST00000577250 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
RIOK3-202ENST00000577250 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
RIOK3-202ENST00000577250 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
RIOK3-202ENST00000577250 FBLN2P98095 1184 aa17.45■□□□□ 0.38
RIOK3-202ENST00000577250 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
RIOK3-202ENST00000577250 EIF4G3O43432 1585 aaKnown RBP17.41■□□□□ 0.38
RIOK3-202ENST00000577250 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.37
RIOK3-202ENST00000577250 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.37
RIOK3-202ENST00000577250 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.37
RIOK3-202ENST00000577250 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.37
RIOK3-202ENST00000577250 SOGA1O94964 1423 aa17.37■□□□□ 0.37
RIOK3-202ENST00000577250 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
RIOK3-202ENST00000577250 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
RIOK3-202ENST00000577250 ARHGEF11O15085 1522 aa17.36■□□□□ 0.37
RIOK3-202ENST00000577250 CYB5RLQ6IPT4 315 aa17.35■□□□□ 0.37
RIOK3-202ENST00000577250 TDRD9Q8NDG6 1382 aaKnown RBP17.35■□□□□ 0.37
RIOK3-202ENST00000577250 SUPT5HO00267 1087 aaKnown RBP17.32■□□□□ 0.36
RIOK3-202ENST00000577250 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
RIOK3-202ENST00000577250 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
RIOK3-202ENST00000577250 CHD1O14646 1710 aa17.27■□□□□ 0.35
RIOK3-202ENST00000577250 CUX1P39880 1505 aa17.24■□□□□ 0.35
RIOK3-202ENST00000577250 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
RIOK3-202ENST00000577250 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
RIOK3-202ENST00000577250 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
RIOK3-202ENST00000577250 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
RIOK3-202ENST00000577250 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
RIOK3-202ENST00000577250 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
RIOK3-202ENST00000577250 GAPVD1Q14C86 1478 aa17.13■□□□□ 0.33
RIOK3-202ENST00000577250 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
RIOK3-202ENST00000577250 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
RIOK3-202ENST00000577250 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
RIOK3-202ENST00000577250 ABCA10Q8WWZ4 1543 aa17.07■□□□□ 0.32
RIOK3-202ENST00000577250 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
RIOK3-202ENST00000577250 PBRM1Q86U86 1689 aa17.02■□□□□ 0.32
RIOK3-202ENST00000577250 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
RIOK3-202ENST00000577250 GRIN2AQ12879 1464 aa16.95■□□□□ 0.3
RIOK3-202ENST00000577250 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
RIOK3-202ENST00000577250 FHAD1B1AJZ9 1412 aa16.92■□□□□ 0.3
RIOK3-202ENST00000577250 BIVM-ERCC5R4GMW8 1640 aa16.91■□□□□ 0.3
RIOK3-202ENST00000577250 ADAMTS12P58397 1594 aa16.89■□□□□ 0.29
RIOK3-202ENST00000577250 NUP160Q12769 1436 aa16.87■□□□□ 0.29
RIOK3-202ENST00000577250 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
RIOK3-202ENST00000577250 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
RIOK3-202ENST00000577250 ERCC6L2Q5T890 1561 aa16.84■□□□□ 0.29
RIOK3-202ENST00000577250 JPH4Q96JJ6 628 aa16.81■□□□□ 0.28
RIOK3-202ENST00000577250 PRG4Q92954 1404 aaPredicted RBP16.79■□□□□ 0.28
RIOK3-202ENST00000577250 AEBP2Q6ZN18 517 aaPredicted RBP16.77■□□□□ 0.28
RIOK3-202ENST00000577250 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
RIOK3-202ENST00000577250 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms