RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 DCAF8L2P0C7V8 631 aa14.93□□□□□ -0.02
SMC2-201ENST00000286398 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
SMC2-201ENST00000286398 SUPT5HO00267 1087 aaKnown RBP14.51□□□□□ -0.09
SMC2-201ENST00000286398 MYT1Q01538 1121 aa14.48□□□□□ -0.09
SMC2-201ENST00000286398 ERICH6Q7L0X2 663 aa14.47□□□□□ -0.09
SMC2-201ENST00000286398 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
SMC2-201ENST00000286398 CENPBP07199 599 aaPredicted RBP14.19□□□□□ -0.14
SMC2-201ENST00000286398 CCER1Q8TC90 406 aaPredicted RBP14.19□□□□□ -0.14
SMC2-201ENST00000286398 PCGF6Q9BYE7 350 aa14.05□□□□□ -0.16
SMC2-201ENST00000286398 APLP2Q06481 763 aa14.01□□□□□ -0.17
SMC2-201ENST00000286398 SHROOM4Q9ULL8 1493 aa13.92□□□□□ -0.18
SMC2-201ENST00000286398 ZEB1P37275 1124 aaPredicted RBP13.9□□□□□ -0.18
SMC2-201ENST00000286398 NEFLP07196 543 aa13.84□□□□□ -0.19
SMC2-201ENST00000286398 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
SMC2-201ENST00000286398 FAM9AQ8IZU1 332 aaPredicted RBP13.76□□□□□ -0.21
SMC2-201ENST00000286398 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
SMC2-201ENST00000286398 DAXXQ9UER7 740 aaPredicted RBP13.54□□□□□ -0.24
SMC2-201ENST00000286398 RANGAP1P46060 587 aaPredicted RBP13.44□□□□□ -0.26
SMC2-201ENST00000286398 RTL5Q5HYW3 569 aaPredicted RBP13.39□□□□□ -0.27
SMC2-201ENST00000286398 HRCP23327 699 aa13.38□□□□□ -0.27
SMC2-201ENST00000286398 TRIM41Q8WV44 630 aa13.35□□□□□ -0.27
SMC2-201ENST00000286398 ATP1B4Q9UN42 357 aaPredicted RBP13.34□□□□□ -0.27
SMC2-201ENST00000286398 UBTFP17480 764 aaKnown RBP13.27□□□□□ -0.29
SMC2-201ENST00000286398 TRIM26Q12899 539 aaPredicted RBP13.27□□□□□ -0.29
SMC2-201ENST00000286398 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
SMC2-201ENST00000286398 NISCHQ9Y2I1 1504 aa13.22□□□□□ -0.29
SMC2-201ENST00000286398 ZNF316A6NFI3 1004 aaPredicted RBP13.21□□□□□ -0.29
SMC2-201ENST00000286398 EIF5BO60841 1220 aaKnown RBP13.12□□□□□ -0.31
SMC2-201ENST00000286398 POLR3GLQ9BT43 218 aa13.12□□□□□ -0.31
SMC2-201ENST00000286398 CLSPNQ9HAW4 1339 aa13.08□□□□□ -0.32
SMC2-201ENST00000286398 DIEXFQ68CQ4 756 aaKnown RBP13.05□□□□□ -0.32
SMC2-201ENST00000286398 CNGB1Q14028 1251 aaPredicted RBP13.04□□□□□ -0.32
SMC2-201ENST00000286398 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.32
SMC2-201ENST00000286398 ITGAEP38570 1179 aa13□□□□□ -0.33
SMC2-201ENST00000286398 GLIPR1L2Q4G1C9 344 aa12.97□□□□□ -0.33
SMC2-201ENST00000286398 BCANQ96GW7 911 aa12.97□□□□□ -0.33
SMC2-201ENST00000286398 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.34
SMC2-201ENST00000286398 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
SMC2-201ENST00000286398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
SMC2-201ENST00000286398 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
SMC2-201ENST00000286398 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
SMC2-201ENST00000286398 ACIN1Q9UKV3 1341 aaKnown RBP12.76□□□□□ -0.37
SMC2-201ENST00000286398 MYT1LQ9UL68 1186 aa12.75□□□□□ -0.37
SMC2-201ENST00000286398 ANP32AP39687 249 aaKnown RBP12.74□□□□□ -0.37
SMC2-201ENST00000286398 CHIC1Q5VXU3 224 aa12.71□□□□□ -0.37
SMC2-201ENST00000286398 ANP32CO43423 234 aa12.69□□□□□ -0.38
SMC2-201ENST00000286398 ZBTB47Q9UFB7 747 aaPredicted RBP12.68□□□□□ -0.38
SMC2-201ENST00000286398 NPM2Q86SE8 214 aaKnown RBP12.63□□□□□ -0.39
SMC2-201ENST00000286398 ANP32BQ92688 251 aaKnown RBP12.62□□□□□ -0.39
SMC2-201ENST00000286398 NEUROD1Q13562 356 aa12.6□□□□□ -0.39
SMC2-201ENST00000286398 BCL11AQ9H165 835 aa12.56□□□□□ -0.4
SMC2-201ENST00000286398 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
SMC2-201ENST00000286398 FAM50AQ14320 339 aaKnown RBP12.54□□□□□ -0.4
SMC2-201ENST00000286398 NBR1Q14596 966 aa12.54□□□□□ -0.4
SMC2-201ENST00000286398 TRIM52Q96A61 297 aa12.53□□□□□ -0.4
SMC2-201ENST00000286398 FKBP8Q14318 412 aa12.52□□□□□ -0.41
SMC2-201ENST00000286398 ARXQ96QS3 562 aa12.49□□□□□ -0.41
SMC2-201ENST00000286398 ZNF326Q5BKZ1 582 aaKnown RBP12.47□□□□□ -0.41
SMC2-201ENST00000286398 HSP90AA1P07900 732 aaKnown RBP12.47□□□□□ -0.41
SMC2-201ENST00000286398 TNNT2P45379 298 aaPredicted RBP12.41□□□□□ -0.42
SMC2-201ENST00000286398 UPF2Q9HAU5 1272 aaKnown RBP12.41□□□□□ -0.42
SMC2-201ENST00000286398 SLC24A1O60721 1099 aa12.37□□□□□ -0.43
SMC2-201ENST00000286398 NEFMP07197 916 aa12.36□□□□□ -0.43
SMC2-201ENST00000286398 HNRNPUQ00839 825 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMC2-201ENST00000286398 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.43
SMC2-201ENST00000286398 AMER1Q5JTC6 1135 aaPredicted RBP12.33□□□□□ -0.43
SMC2-201ENST00000286398 CDK11BP21127 795 aaKnown RBP12.32□□□□□ -0.44
SMC2-201ENST00000286398 CCDC136Q96JN2 1154 aa12.32□□□□□ -0.44
SMC2-201ENST00000286398 RTN4Q9NQC3 1192 aaKnown RBP12.3□□□□□ -0.44
SMC2-201ENST00000286398 ANP32EQ9BTT0 268 aa12.27□□□□□ -0.45
SMC2-201ENST00000286398 FAM9BQ8IZU0 186 aa12.24□□□□□ -0.45
SMC2-201ENST00000286398 TRIM44Q96DX7 344 aaPredicted RBP12.24□□□□□ -0.45
SMC2-201ENST00000286398 NAP1L5Q96NT1 182 aaPredicted RBP12.23□□□□□ -0.45
SMC2-201ENST00000286398 DDX10Q13206 875 aaKnown RBP12.22□□□□□ -0.45
SMC2-201ENST00000286398 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.21□□□□□ -0.45
SMC2-201ENST00000286398 SALL2Q9Y467 1007 aaPredicted RBP12.2□□□□□ -0.46
SMC2-201ENST00000286398 ERICH6BQ5W0A0 696 aa12.19□□□□□ -0.46
SMC2-201ENST00000286398 IRX6P78412 446 aaPredicted RBP12.16□□□□□ -0.46
SMC2-201ENST00000286398 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
SMC2-201ENST00000286398 TMC1Q8TDI8 760 aa12.12□□□□□ -0.47
SMC2-201ENST00000286398 BECN1Q14457 450 aa12.12□□□□□ -0.47
SMC2-201ENST00000286398 DNTTIP2Q5QJE6 756 aaKnown RBP12.11□□□□□ -0.47
SMC2-201ENST00000286398 TONSLQ96HA7 1378 aa12.11□□□□□ -0.47
SMC2-201ENST00000286398 MIER1Q8N108 512 aa12.1□□□□□ -0.47
SMC2-201ENST00000286398 GOLGA6L22H0YM25 854 aa12.09□□□□□ -0.47
SMC2-201ENST00000286398 MRS2Q9HD23 443 aa12.08□□□□□ -0.48
SMC2-201ENST00000286398 PTMAP06454 111 aaKnown RBP12.08□□□□□ -0.48
SMC2-201ENST00000286398 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
SMC2-201ENST00000286398 NCLP19338 710 aaKnown RBP12.07□□□□□ -0.48
SMC2-201ENST00000286398 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
SMC2-201ENST00000286398 WDR43Q15061 677 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMC2-201ENST00000286398 ZBTB4Q9P1Z0 1013 aaPredicted RBP12□□□□□ -0.49
SMC2-201ENST00000286398 LAS1LQ9Y4W2 734 aaKnown RBP12□□□□□ -0.49
SMC2-201ENST00000286398 MYH16Q9H6N6 1097 aa11.99□□□□□ -0.49
SMC2-201ENST00000286398 P3H3Q8IVL6 736 aa11.98□□□□□ -0.49
SMC2-201ENST00000286398 NOP58Q9Y2X3 529 aaKnown RBP11.97□□□□□ -0.49
SMC2-201ENST00000286398 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.5
SMC2-201ENST00000286398 ZNF777Q9ULD5 760 aaPredicted RBP11.95□□□□□ -0.5
SMC2-201ENST00000286398 ARID3CA6NKF2 412 aa11.95□□□□□ -0.5
SMC2-201ENST00000286398 DEKP35659 375 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms