RNA–Protein interactions for RNA: ENST00000509085.5

HMGCR-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best)

Gene HMGCR, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-207ENST00000509085 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
HMGCR-207ENST00000509085 ABCC9O60706 1549 aa20.08■□□□□ 0.81
HMGCR-207ENST00000509085 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.8
HMGCR-207ENST00000509085 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
HMGCR-207ENST00000509085 NACADO15069 1562 aa18.99■□□□□ 0.63
HMGCR-207ENST00000509085 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
HMGCR-207ENST00000509085 MYO15BQ96JP2 1530 aa18.72■□□□□ 0.59
HMGCR-207ENST00000509085 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
HMGCR-207ENST00000509085 UNC13AQ9UPW8 1703 aa18.68■□□□□ 0.58
HMGCR-207ENST00000509085 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
HMGCR-207ENST00000509085 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
HMGCR-207ENST00000509085 SHROOM4Q9ULL8 1493 aa18.42■□□□□ 0.54
HMGCR-207ENST00000509085 DCAF1Q9Y4B6 1507 aa18.41■□□□□ 0.54
HMGCR-207ENST00000509085 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.54
HMGCR-207ENST00000509085 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
HMGCR-207ENST00000509085 CC2D2AQ9P2K1 1620 aa18.18■□□□□ 0.5
HMGCR-207ENST00000509085 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
HMGCR-207ENST00000509085 EIF4G1Q04637 1599 aaKnown RBP18.12■□□□□ 0.49
HMGCR-207ENST00000509085 DNAJC5Q9H3Z4 198 aa17.55■□□□□ 0.4
HMGCR-207ENST00000509085 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
HMGCR-207ENST00000509085 CUX2O14529 1486 aa17.48■□□□□ 0.39
HMGCR-207ENST00000509085 ERCC6Q03468 1493 aa17.41■□□□□ 0.38
HMGCR-207ENST00000509085 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
HMGCR-207ENST00000509085 ATAD2BQ9ULI0 1458 aa17.4■□□□□ 0.38
HMGCR-207ENST00000509085 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
HMGCR-207ENST00000509085 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
HMGCR-207ENST00000509085 AEBP2Q6ZN18 517 aaPredicted RBP17.3■□□□□ 0.36
HMGCR-207ENST00000509085 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
HMGCR-207ENST00000509085 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
HMGCR-207ENST00000509085 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
HMGCR-207ENST00000509085 NESP48681 1621 aa17.19■□□□□ 0.34
HMGCR-207ENST00000509085 LAMC3Q9Y6N6 1575 aa17.17■□□□□ 0.34
HMGCR-207ENST00000509085 THOC2Q8NI27 1593 aaKnown RBP17.13■□□□□ 0.33
HMGCR-207ENST00000509085 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
HMGCR-207ENST00000509085 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
HMGCR-207ENST00000509085 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
HMGCR-207ENST00000509085 CADPSQ9ULU8 1353 aa16.94■□□□□ 0.3
HMGCR-207ENST00000509085 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
HMGCR-207ENST00000509085 WDR62O43379 1518 aa16.88■□□□□ 0.29
HMGCR-207ENST00000509085 WIZO95785 1651 aa16.86■□□□□ 0.29
HMGCR-207ENST00000509085 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
HMGCR-207ENST00000509085 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
HMGCR-207ENST00000509085 CFTRP13569 1480 aa16.73■□□□□ 0.27
HMGCR-207ENST00000509085 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
HMGCR-207ENST00000509085 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
HMGCR-207ENST00000509085 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
HMGCR-207ENST00000509085 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
HMGCR-207ENST00000509085 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
HMGCR-207ENST00000509085 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
HMGCR-207ENST00000509085 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
HMGCR-207ENST00000509085 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
HMGCR-207ENST00000509085 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
HMGCR-207ENST00000509085 ABCC8Q09428 1581 aa16.45■□□□□ 0.22
HMGCR-207ENST00000509085 TOPBP1Q92547 1522 aa16.42■□□□□ 0.22
HMGCR-207ENST00000509085 RIMBP3CA6NJZ7 1639 aa16.4■□□□□ 0.22
HMGCR-207ENST00000509085 RIMBP3BA6NNM3 1639 aa16.4■□□□□ 0.22
HMGCR-207ENST00000509085 RIMBP3Q9UFD9 1639 aa16.4■□□□□ 0.22
HMGCR-207ENST00000509085 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
HMGCR-207ENST00000509085 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
HMGCR-207ENST00000509085 EIF4G3O43432 1585 aaKnown RBP16.36■□□□□ 0.21
HMGCR-207ENST00000509085 ARHGEF11O15085 1522 aa16.34■□□□□ 0.21
HMGCR-207ENST00000509085 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
HMGCR-207ENST00000509085 CHD1O14646 1710 aa16.26■□□□□ 0.19
HMGCR-207ENST00000509085 POLA1P09884 1462 aaPredicted RBP16.23■□□□□ 0.19
HMGCR-207ENST00000509085 WDR97A6NE52 1622 aa16.22■□□□□ 0.19
HMGCR-207ENST00000509085 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.192e-18■■■■■ 63.4
HMGCR-207ENST00000509085 SOGA1O94964 1423 aa16.15■□□□□ 0.18
HMGCR-207ENST00000509085 CYB5RLQ6IPT4 315 aa16.15■□□□□ 0.18
HMGCR-207ENST00000509085 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
HMGCR-207ENST00000509085 FBLN2P98095 1184 aa16.13■□□□□ 0.17
HMGCR-207ENST00000509085 RAD54L2Q9Y4B4 1467 aa16.13■□□□□ 0.17
HMGCR-207ENST00000509085 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
HMGCR-207ENST00000509085 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
HMGCR-207ENST00000509085 TDRD9Q8NDG6 1382 aaKnown RBP16.1■□□□□ 0.17
HMGCR-207ENST00000509085 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
HMGCR-207ENST00000509085 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
HMGCR-207ENST00000509085 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
HMGCR-207ENST00000509085 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
HMGCR-207ENST00000509085 CUX1P39880 1505 aa16.05■□□□□ 0.16
HMGCR-207ENST00000509085 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
HMGCR-207ENST00000509085 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
HMGCR-207ENST00000509085 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
HMGCR-207ENST00000509085 PBRM1Q86U86 1689 aa16■□□□□ 0.15
HMGCR-207ENST00000509085 GAPVD1Q14C86 1478 aa15.96■□□□□ 0.14
HMGCR-207ENST00000509085 ABCA10Q8WWZ4 1543 aa15.95■□□□□ 0.14
HMGCR-207ENST00000509085 ABCA5Q8WWZ7 1642 aa15.94■□□□□ 0.14
HMGCR-207ENST00000509085 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
HMGCR-207ENST00000509085 GRIN2AQ12879 1464 aa15.84■□□□□ 0.13
HMGCR-207ENST00000509085 ADAMTS12P58397 1594 aa15.83■□□□□ 0.13
HMGCR-207ENST00000509085 BIVM-ERCC5R4GMW8 1640 aa15.82■□□□□ 0.12
HMGCR-207ENST00000509085 TOP2BQ02880 1626 aa15.81■□□□□ 0.12
HMGCR-207ENST00000509085 NUP160Q12769 1436 aa15.8■□□□□ 0.12
HMGCR-207ENST00000509085 CEP170Q5SW79 1584 aa15.79■□□□□ 0.12
HMGCR-207ENST00000509085 SHROOM2Q13796 1616 aa15.78■□□□□ 0.12
HMGCR-207ENST00000509085 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
HMGCR-207ENST00000509085 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.11
HMGCR-207ENST00000509085 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
HMGCR-207ENST00000509085 SUPT5HO00267 1087 aaKnown RBP15.73■□□□□ 0.11
HMGCR-207ENST00000509085 PRG4Q92954 1404 aaPredicted RBP15.63■□□□□ 0.09
HMGCR-207ENST00000509085 KIF13AQ9H1H9 1805 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms