RNA–Protein interactions for RNA: ENST00000618160.4

GTF2H3-214, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5 BASIC

Gene GTF2H3, Length 3,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-214ENST00000618160 NISCHQ9Y2I1 1504 aa21.93■■□□□ 1.1
GTF2H3-214ENST00000618160 SHROOM4Q9ULL8 1493 aa18.95■□□□□ 0.62
GTF2H3-214ENST00000618160 DCAF8L2P0C7V8 631 aa18.94■□□□□ 0.62
GTF2H3-214ENST00000618160 CCDC180Q9P1Z9 1646 aa18.63■□□□□ 0.57
GTF2H3-214ENST00000618160 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
GTF2H3-214ENST00000618160 SUPT5HO00267 1087 aaKnown RBP18.43■□□□□ 0.54
GTF2H3-214ENST00000618160 ABCC9O60706 1549 aa17.99■□□□□ 0.47
GTF2H3-214ENST00000618160 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
GTF2H3-214ENST00000618160 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
GTF2H3-214ENST00000618160 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.41
GTF2H3-214ENST00000618160 MYO15BQ96JP2 1530 aa17.44■□□□□ 0.38
GTF2H3-214ENST00000618160 NACADO15069 1562 aa17.34■□□□□ 0.37
GTF2H3-214ENST00000618160 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
GTF2H3-214ENST00000618160 PABPN1Q86U42 306 aaKnown RBP eCLIP17.3■□□□□ 0.36
GTF2H3-214ENST00000618160 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
GTF2H3-214ENST00000618160 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
GTF2H3-214ENST00000618160 LOC105371045A0A1W2PR82 267 aa17.18■□□□□ 0.34
GTF2H3-214ENST00000618160 RB1CC1Q8TDY2 1594 aa17.18■□□□□ 0.34
GTF2H3-214ENST00000618160 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.33
GTF2H3-214ENST00000618160 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
GTF2H3-214ENST00000618160 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
GTF2H3-214ENST00000618160 WIZO95785 1651 aa17.01■□□□□ 0.31
GTF2H3-214ENST00000618160 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
GTF2H3-214ENST00000618160 UNC13AQ9UPW8 1703 aa16.88■□□□□ 0.29
GTF2H3-214ENST00000618160 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
GTF2H3-214ENST00000618160 SMARCA4P51532 1647 aa16.75■□□□□ 0.27
GTF2H3-214ENST00000618160 BICRAQ9NZM4 1560 aa16.71■□□□□ 0.27
GTF2H3-214ENST00000618160 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
GTF2H3-214ENST00000618160 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
GTF2H3-214ENST00000618160 ABCC8Q09428 1581 aa16.61■□□□□ 0.25
GTF2H3-214ENST00000618160 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
GTF2H3-214ENST00000618160 HRCP23327 699 aa16.6■□□□□ 0.25
GTF2H3-214ENST00000618160 SMARCA2P51531 1590 aa16.57■□□□□ 0.24
GTF2H3-214ENST00000618160 TTBK1Q5TCY1 1321 aaPredicted RBP16.52■□□□□ 0.23
GTF2H3-214ENST00000618160 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
GTF2H3-214ENST00000618160 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
GTF2H3-214ENST00000618160 BAZ1BQ9UIG0 1483 aaKnown RBP16.44■□□□□ 0.22
GTF2H3-214ENST00000618160 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
GTF2H3-214ENST00000618160 RANGAP1P46060 587 aaPredicted RBP16.42■□□□□ 0.22
GTF2H3-214ENST00000618160 SOGA1O94964 1423 aa16.41■□□□□ 0.22
GTF2H3-214ENST00000618160 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
GTF2H3-214ENST00000618160 RUSC2Q8N2Y8 1516 aa16.34■□□□□ 0.21
GTF2H3-214ENST00000618160 PEG3Q9GZU2 1588 aa16.33■□□□□ 0.2
GTF2H3-214ENST00000618160 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
GTF2H3-214ENST00000618160 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
GTF2H3-214ENST00000618160 SYNJ1O43426 1573 aa16.21■□□□□ 0.18
GTF2H3-214ENST00000618160 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
GTF2H3-214ENST00000618160 EEA1Q15075 1411 aa16.11■□□□□ 0.17
GTF2H3-214ENST00000618160 TNIKQ9UKE5 1360 aa16.1■□□□□ 0.17
GTF2H3-214ENST00000618160 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
GTF2H3-214ENST00000618160 GOLGA3Q08378 1498 aa16.07■□□□□ 0.16
GTF2H3-214ENST00000618160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
GTF2H3-214ENST00000618160 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
GTF2H3-214ENST00000618160 HMGXB3Q12766 1538 aa16.02■□□□□ 0.15
GTF2H3-214ENST00000618160 CEP164Q9UPV0 1460 aa16■□□□□ 0.15
GTF2H3-214ENST00000618160 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
GTF2H3-214ENST00000618160 CCER1Q8TC90 406 aaPredicted RBP15.97■□□□□ 0.15
GTF2H3-214ENST00000618160 CC2D2AQ9P2K1 1620 aa15.97■□□□□ 0.15
GTF2H3-214ENST00000618160 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
GTF2H3-214ENST00000618160 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
GTF2H3-214ENST00000618160 CLIP1P30622 1438 aa15.94■□□□□ 0.14
GTF2H3-214ENST00000618160 CUX1P39880 1505 aa15.92■□□□□ 0.14
GTF2H3-214ENST00000618160 CFTRP13569 1480 aa15.91■□□□□ 0.14
GTF2H3-214ENST00000618160 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.14
GTF2H3-214ENST00000618160 APLP2Q06481 763 aa15.89■□□□□ 0.13
GTF2H3-214ENST00000618160 KIF21BO75037 1637 aa15.89■□□□□ 0.13
GTF2H3-214ENST00000618160 NESP48681 1621 aa15.87■□□□□ 0.13
GTF2H3-214ENST00000618160 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
GTF2H3-214ENST00000618160 BIVM-ERCC5R4GMW8 1640 aa15.86■□□□□ 0.13
GTF2H3-214ENST00000618160 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
GTF2H3-214ENST00000618160 CUX2O14529 1486 aa15.8■□□□□ 0.12
GTF2H3-214ENST00000618160 P3H3Q8IVL6 736 aa15.8■□□□□ 0.12
GTF2H3-214ENST00000618160 ATP1B4Q9UN42 357 aaPredicted RBP15.79■□□□□ 0.12
GTF2H3-214ENST00000618160 VPS8Q8N3P4 1428 aa15.78■□□□□ 0.12
GTF2H3-214ENST00000618160 FANCD2Q9BXW9 1451 aa15.76■□□□□ 0.11
GTF2H3-214ENST00000618160 PRXQ9BXM0 1461 aa15.76■□□□□ 0.11
GTF2H3-214ENST00000618160 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
GTF2H3-214ENST00000618160 RAD54L2Q9Y4B4 1467 aa15.72■□□□□ 0.11
GTF2H3-214ENST00000618160 ITGAEP38570 1179 aa15.69■□□□□ 0.1
GTF2H3-214ENST00000618160 KANK4Q5T7N3 995 aaPredicted RBP15.68■□□□□ 0.1
GTF2H3-214ENST00000618160 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
GTF2H3-214ENST00000618160 IGF1RP08069 1367 aa15.67■□□□□ 0.1
GTF2H3-214ENST00000618160 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
GTF2H3-214ENST00000618160 CARMIL1Q5VZK9 1371 aa15.65■□□□□ 0.1
GTF2H3-214ENST00000618160 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
GTF2H3-214ENST00000618160 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
GTF2H3-214ENST00000618160 ARHGAP35Q9NRY4 1499 aa15.57■□□□□ 0.08
GTF2H3-214ENST00000618160 TOPBP1Q92547 1522 aa15.57■□□□□ 0.08
GTF2H3-214ENST00000618160 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
GTF2H3-214ENST00000618160 ARID3CA6NKF2 412 aa15.52■□□□□ 0.07
GTF2H3-214ENST00000618160 URB2Q14146 1524 aaKnown RBP15.51■□□□□ 0.07
GTF2H3-214ENST00000618160 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
GTF2H3-214ENST00000618160 PDS5BQ9NTI5 1447 aa15.5■□□□□ 0.07
GTF2H3-214ENST00000618160 DIEXFQ68CQ4 756 aaKnown RBP15.46■□□□□ 0.07
GTF2H3-214ENST00000618160 FHOD3Q2V2M9 1422 aa15.45■□□□□ 0.06
GTF2H3-214ENST00000618160 FAM50AQ14320 339 aaKnown RBP15.44■□□□□ 0.06
GTF2H3-214ENST00000618160 ABCA10Q8WWZ4 1543 aa15.44■□□□□ 0.06
GTF2H3-214ENST00000618160 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
GTF2H3-214ENST00000618160 FBLN2P98095 1184 aa15.41■□□□□ 0.06
GTF2H3-214ENST00000618160 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.063e-6■■■□□ 15.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms