RNA–Protein interactions for RNA: ENST00000492758.1

ATP6V1F-202, Transcript of ATPase H+ transporting V1 subunit F, humanhuman

TSL 2 BASIC

Gene ATP6V1F, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1F-202ENST00000492758 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
ATP6V1F-202ENST00000492758 CCDC180Q9P1Z9 1646 aa24.55■■□□□ 1.52
ATP6V1F-202ENST00000492758 ABCC9O60706 1549 aa24.5■■□□□ 1.51
ATP6V1F-202ENST00000492758 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
ATP6V1F-202ENST00000492758 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
ATP6V1F-202ENST00000492758 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
ATP6V1F-202ENST00000492758 RB1CC1Q8TDY2 1594 aa23.27■■□□□ 1.32
ATP6V1F-202ENST00000492758 NACADO15069 1562 aa23.17■■□□□ 1.3
ATP6V1F-202ENST00000492758 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
ATP6V1F-202ENST00000492758 PABPN1Q86U42 306 aaKnown RBP eCLIP22.97■■□□□ 1.27
ATP6V1F-202ENST00000492758 MYO15BQ96JP2 1530 aa22.86■■□□□ 1.25
ATP6V1F-202ENST00000492758 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.23
ATP6V1F-202ENST00000492758 DCAF1Q9Y4B6 1507 aa22.76■■□□□ 1.23
ATP6V1F-202ENST00000492758 DNAJC5BQ9UF47 199 aa22.7■■□□□ 1.22
ATP6V1F-202ENST00000492758 SCRIBQ14160 1630 aa22.66■■□□□ 1.22
ATP6V1F-202ENST00000492758 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
ATP6V1F-202ENST00000492758 SHROOM4Q9ULL8 1493 aa22.15■■□□□ 1.14
ATP6V1F-202ENST00000492758 EIF4G1Q04637 1599 aaKnown RBP22.05■■□□□ 1.12
ATP6V1F-202ENST00000492758 CC2D2AQ9P2K1 1620 aa22.03■■□□□ 1.12
ATP6V1F-202ENST00000492758 CECR2Q9BXF3 1484 aa21.95■■□□□ 1.1
ATP6V1F-202ENST00000492758 SMARCA4P51532 1647 aa21.53■■□□□ 1.04
ATP6V1F-202ENST00000492758 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
ATP6V1F-202ENST00000492758 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
ATP6V1F-202ENST00000492758 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
ATP6V1F-202ENST00000492758 NCAPD3P42695 1498 aa21.42■■□□□ 1.02
ATP6V1F-202ENST00000492758 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
ATP6V1F-202ENST00000492758 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
ATP6V1F-202ENST00000492758 HMGXB3Q12766 1538 aa21.26■□□□□ 0.99
ATP6V1F-202ENST00000492758 WIZO95785 1651 aa21.2■□□□□ 0.98
ATP6V1F-202ENST00000492758 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
ATP6V1F-202ENST00000492758 NESP48681 1621 aa21.15■□□□□ 0.98
ATP6V1F-202ENST00000492758 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
ATP6V1F-202ENST00000492758 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
ATP6V1F-202ENST00000492758 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
ATP6V1F-202ENST00000492758 CADPSQ9ULU8 1353 aa20.86■□□□□ 0.93
ATP6V1F-202ENST00000492758 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
ATP6V1F-202ENST00000492758 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
ATP6V1F-202ENST00000492758 KIF21AQ7Z4S6 1674 aa20.78■□□□□ 0.92
ATP6V1F-202ENST00000492758 CUX2O14529 1486 aa20.75■□□□□ 0.91
ATP6V1F-202ENST00000492758 CCDC88BA6NC98 1476 aa20.72■□□□□ 0.91
ATP6V1F-202ENST00000492758 SUPT5HO00267 1087 aaKnown RBP20.71■□□□□ 0.91
ATP6V1F-202ENST00000492758 THOC2Q8NI27 1593 aaKnown RBP20.71■□□□□ 0.91
ATP6V1F-202ENST00000492758 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
ATP6V1F-202ENST00000492758 CFTRP13569 1480 aa20.66■□□□□ 0.9
ATP6V1F-202ENST00000492758 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
ATP6V1F-202ENST00000492758 MRC2Q9UBG0 1479 aa20.61■□□□□ 0.89
ATP6V1F-202ENST00000492758 CEP164Q9UPV0 1460 aa20.61■□□□□ 0.89
ATP6V1F-202ENST00000492758 WDR62O43379 1518 aa20.49■□□□□ 0.87
ATP6V1F-202ENST00000492758 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
ATP6V1F-202ENST00000492758 DNAJC5Q9H3Z4 198 aa20.43■□□□□ 0.86
ATP6V1F-202ENST00000492758 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
ATP6V1F-202ENST00000492758 TOPBP1Q92547 1522 aa20.29■□□□□ 0.84
ATP6V1F-202ENST00000492758 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
ATP6V1F-202ENST00000492758 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
ATP6V1F-202ENST00000492758 IFT140Q96RY7 1462 aa20.17■□□□□ 0.82
ATP6V1F-202ENST00000492758 ABCC8Q09428 1581 aa20.14■□□□□ 0.81
ATP6V1F-202ENST00000492758 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.81
ATP6V1F-202ENST00000492758 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
ATP6V1F-202ENST00000492758 CUX1P39880 1505 aa20.11■□□□□ 0.81
ATP6V1F-202ENST00000492758 AQRO60306 1485 aaKnown RBP eCLIP20.09■□□□□ 0.81
ATP6V1F-202ENST00000492758 FGD5Q6ZNL6 1462 aa20.07■□□□□ 0.8
ATP6V1F-202ENST00000492758 SOGA1O94964 1423 aa20.06■□□□□ 0.8
ATP6V1F-202ENST00000492758 TDRD9Q8NDG6 1382 aaKnown RBP20.05■□□□□ 0.8
ATP6V1F-202ENST00000492758 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.8
ATP6V1F-202ENST00000492758 EIF4G3O43432 1585 aaKnown RBP20.02■□□□□ 0.8
ATP6V1F-202ENST00000492758 OSCARQ8IYS5 282 aa20■□□□□ 0.79
ATP6V1F-202ENST00000492758 FBLN2P98095 1184 aa19.99■□□□□ 0.79
ATP6V1F-202ENST00000492758 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
ATP6V1F-202ENST00000492758 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
ATP6V1F-202ENST00000492758 SYNJ1O43426 1573 aa19.89■□□□□ 0.77
ATP6V1F-202ENST00000492758 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
ATP6V1F-202ENST00000492758 CHD1O14646 1710 aa19.8■□□□□ 0.76
ATP6V1F-202ENST00000492758 CHMP7Q8WUX9 453 aaPredicted RBP19.8■□□□□ 0.76
ATP6V1F-202ENST00000492758 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
ATP6V1F-202ENST00000492758 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
ATP6V1F-202ENST00000492758 WDR97A6NE52 1622 aa19.79■□□□□ 0.76
ATP6V1F-202ENST00000492758 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
ATP6V1F-202ENST00000492758 ABCA10Q8WWZ4 1543 aa19.78■□□□□ 0.76
ATP6V1F-202ENST00000492758 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
ATP6V1F-202ENST00000492758 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
ATP6V1F-202ENST00000492758 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
ATP6V1F-202ENST00000492758 ABCA5Q8WWZ7 1642 aa19.7■□□□□ 0.74
ATP6V1F-202ENST00000492758 MAGI1Q96QZ7 1491 aaPredicted RBP19.69■□□□□ 0.74
ATP6V1F-202ENST00000492758 RIMBP3CA6NJZ7 1639 aa19.67■□□□□ 0.74
ATP6V1F-202ENST00000492758 RIMBP3BA6NNM3 1639 aa19.67■□□□□ 0.74
ATP6V1F-202ENST00000492758 RIMBP3Q9UFD9 1639 aa19.67■□□□□ 0.74
ATP6V1F-202ENST00000492758 SYNJ2O15056 1496 aa19.66■□□□□ 0.74
ATP6V1F-202ENST00000492758 ARHGEF11O15085 1522 aa19.64■□□□□ 0.73
ATP6V1F-202ENST00000492758 CYB5RLQ6IPT4 315 aa19.62■□□□□ 0.73
ATP6V1F-202ENST00000492758 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
ATP6V1F-202ENST00000492758 CLASP1Q7Z460 1538 aa19.55■□□□□ 0.72
ATP6V1F-202ENST00000492758 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
ATP6V1F-202ENST00000492758 FHAD1B1AJZ9 1412 aa19.53■□□□□ 0.72
ATP6V1F-202ENST00000492758 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
ATP6V1F-202ENST00000492758 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
ATP6V1F-202ENST00000492758 KIF27Q86VH2 1401 aa19.48■□□□□ 0.71
ATP6V1F-202ENST00000492758 CEP170Q5SW79 1584 aa19.48■□□□□ 0.71
ATP6V1F-202ENST00000492758 IGF1RP08069 1367 aa19.46■□□□□ 0.71
ATP6V1F-202ENST00000492758 NUP160Q12769 1436 aa19.43■□□□□ 0.7
ATP6V1F-202ENST00000492758 ERCC6L2Q5T890 1561 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms