Protein–RNA interactions for Protein: Q8N145

LGI3, Leucine-rich repeat LGI family member 3, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI3Q8N145 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LGI3Q8N145 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LGI3Q8N145 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.87■□□□□ 0.93
LGI3Q8N145 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.87■□□□□ 0.93
LGI3Q8N145 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.87■□□□□ 0.93
LGI3Q8N145 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LGI3Q8N145 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LGI3Q8N145 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LGI3Q8N145 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGI3Q8N145 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
LGI3Q8N145 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.84■□□□□ 0.93
LGI3Q8N145 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
LGI3Q8N145 AC100797.4-201ENST00000631653 1827 ntBASIC20.84■□□□□ 0.93
LGI3Q8N145 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LGI3Q8N145 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LGI3Q8N145 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LGI3Q8N145 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGI3Q8N145 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.83■□□□□ 0.93
LGI3Q8N145 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGI3Q8N145 AC091060.1-201ENST00000623524 1766 ntBASIC20.83■□□□□ 0.93
LGI3Q8N145 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LGI3Q8N145 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
LGI3Q8N145 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGI3Q8N145 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LGI3Q8N145 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LGI3Q8N145 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGI3Q8N145 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LGI3Q8N145 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.82■□□□□ 0.92
LGI3Q8N145 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LGI3Q8N145 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.82■□□□□ 0.92
LGI3Q8N145 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LGI3Q8N145 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGI3Q8N145 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGI3Q8N145 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LGI3Q8N145 AP002414.2-202ENST00000590929 1450 ntBASIC20.81■□□□□ 0.92
LGI3Q8N145 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGI3Q8N145 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGI3Q8N145 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGI3Q8N145 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LGI3Q8N145 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LGI3Q8N145 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LGI3Q8N145 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.8■□□□□ 0.92
LGI3Q8N145 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LGI3Q8N145 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LGI3Q8N145 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LGI3Q8N145 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LGI3Q8N145 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LGI3Q8N145 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LGI3Q8N145 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI3Q8N145 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI3Q8N145 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI3Q8N145 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI3Q8N145 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.78■□□□□ 0.92
LGI3Q8N145 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.78■□□□□ 0.92
LGI3Q8N145 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LGI3Q8N145 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LGI3Q8N145 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
LGI3Q8N145 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LGI3Q8N145 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LGI3Q8N145 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.76■□□□□ 0.91
LGI3Q8N145 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.76■□□□□ 0.91
LGI3Q8N145 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LGI3Q8N145 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
LGI3Q8N145 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LGI3Q8N145 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LGI3Q8N145 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LGI3Q8N145 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.74■□□□□ 0.91
LGI3Q8N145 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.74■□□□□ 0.91
LGI3Q8N145 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LGI3Q8N145 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LGI3Q8N145 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LGI3Q8N145 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LGI3Q8N145 AC145676.1-201ENST00000514988 2004 ntBASIC20.73■□□□□ 0.91
LGI3Q8N145 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LGI3Q8N145 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LGI3Q8N145 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LGI3Q8N145 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LGI3Q8N145 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.72■□□□□ 0.91
LGI3Q8N145 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LGI3Q8N145 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LGI3Q8N145 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.72■□□□□ 0.91
LGI3Q8N145 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.72■□□□□ 0.91
LGI3Q8N145 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.72■□□□□ 0.91
LGI3Q8N145 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LGI3Q8N145 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.72■□□□□ 0.91
LGI3Q8N145 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
LGI3Q8N145 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LGI3Q8N145 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LGI3Q8N145 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LGI3Q8N145 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.7■□□□□ 0.9
LGI3Q8N145 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI3Q8N145 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LGI3Q8N145 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI3Q8N145 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI3Q8N145 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI3Q8N145 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LGI3Q8N145 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LGI3Q8N145 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LGI3Q8N145 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.69■□□□□ 0.9
LGI3Q8N145 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms