Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SWSAP1Q6NVH7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SWSAP1Q6NVH7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.55■■■□□ 2.16
SWSAP1Q6NVH7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SWSAP1Q6NVH7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
SWSAP1Q6NVH7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.54■■■□□ 2.16
SWSAP1Q6NVH7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.54■■■□□ 2.16
SWSAP1Q6NVH7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
SWSAP1Q6NVH7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.54■■■□□ 2.16
SWSAP1Q6NVH7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.54■■■□□ 2.16
SWSAP1Q6NVH7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.54■■■□□ 2.16
SWSAP1Q6NVH7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SWSAP1Q6NVH7 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.53■■■□□ 2.16
SWSAP1Q6NVH7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.53■■■□□ 2.16
SWSAP1Q6NVH7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SWSAP1Q6NVH7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
SWSAP1Q6NVH7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
SWSAP1Q6NVH7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SWSAP1Q6NVH7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SWSAP1Q6NVH7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.51■■■□□ 2.15
SWSAP1Q6NVH7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SWSAP1Q6NVH7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.5■■■□□ 2.15
SWSAP1Q6NVH7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
SWSAP1Q6NVH7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
SWSAP1Q6NVH7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
SWSAP1Q6NVH7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SWSAP1Q6NVH7 ABCB10P3-201ENST00000561950 2166 ntBASIC28.49■■■□□ 2.15
SWSAP1Q6NVH7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
SWSAP1Q6NVH7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SWSAP1Q6NVH7 HSD17B1P1-201ENST00000590052 955 ntBASIC28.48■■■□□ 2.15
SWSAP1Q6NVH7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SWSAP1Q6NVH7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.48■■■□□ 2.15
SWSAP1Q6NVH7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.47■■■□□ 2.15
SWSAP1Q6NVH7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.47■■■□□ 2.15
SWSAP1Q6NVH7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.47■■■□□ 2.15
SWSAP1Q6NVH7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.47■■■□□ 2.15
SWSAP1Q6NVH7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SWSAP1Q6NVH7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SWSAP1Q6NVH7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.46■■■□□ 2.15
SWSAP1Q6NVH7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SWSAP1Q6NVH7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
SWSAP1Q6NVH7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.45■■■□□ 2.14
SWSAP1Q6NVH7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.45■■■□□ 2.14
SWSAP1Q6NVH7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.45■■■□□ 2.14
SWSAP1Q6NVH7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SWSAP1Q6NVH7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.44■■■□□ 2.14
SWSAP1Q6NVH7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.44■■■□□ 2.14
SWSAP1Q6NVH7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
SWSAP1Q6NVH7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
SWSAP1Q6NVH7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SWSAP1Q6NVH7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SWSAP1Q6NVH7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SWSAP1Q6NVH7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.41■■■□□ 2.14
SWSAP1Q6NVH7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SWSAP1Q6NVH7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SWSAP1Q6NVH7 AC148477.6-201ENST00000623746 465 ntBASIC28.4■■■□□ 2.14
SWSAP1Q6NVH7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.39■■■□□ 2.14
SWSAP1Q6NVH7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SWSAP1Q6NVH7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.39■■■□□ 2.14
SWSAP1Q6NVH7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.39■■■□□ 2.14
SWSAP1Q6NVH7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.39■■■□□ 2.14
SWSAP1Q6NVH7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.39■■■□□ 2.13
SWSAP1Q6NVH7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.38■■■□□ 2.13
SWSAP1Q6NVH7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.37■■■□□ 2.13
SWSAP1Q6NVH7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SWSAP1Q6NVH7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SWSAP1Q6NVH7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.37■■■□□ 2.13
SWSAP1Q6NVH7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
SWSAP1Q6NVH7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.36■■■□□ 2.13
SWSAP1Q6NVH7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SWSAP1Q6NVH7 MIR219A2-201ENST00000608502 1504 ntBASIC28.36■■■□□ 2.13
SWSAP1Q6NVH7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SWSAP1Q6NVH7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SWSAP1Q6NVH7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.35■■■□□ 2.13
SWSAP1Q6NVH7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SWSAP1Q6NVH7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SWSAP1Q6NVH7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SWSAP1Q6NVH7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SWSAP1Q6NVH7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SWSAP1Q6NVH7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SWSAP1Q6NVH7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
SWSAP1Q6NVH7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.34■■■□□ 2.13
SWSAP1Q6NVH7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SWSAP1Q6NVH7 GPX1-201ENST00000419349 1106 ntBASIC28.34■■■□□ 2.13
SWSAP1Q6NVH7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.34■■■□□ 2.13
SWSAP1Q6NVH7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.34■■■□□ 2.13
SWSAP1Q6NVH7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
SWSAP1Q6NVH7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
SWSAP1Q6NVH7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
SWSAP1Q6NVH7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.33■■■□□ 2.13
SWSAP1Q6NVH7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.33■■■□□ 2.13
SWSAP1Q6NVH7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.33■■■□□ 2.13
SWSAP1Q6NVH7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.33■■■□□ 2.13
SWSAP1Q6NVH7 AC139426.1-201ENST00000568218 2529 ntBASIC28.33■■■□□ 2.13
SWSAP1Q6NVH7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.12
SWSAP1Q6NVH7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
SWSAP1Q6NVH7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SWSAP1Q6NVH7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SWSAP1Q6NVH7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SWSAP1Q6NVH7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms