Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 AC008813.1-201ENST00000536597 885 ntBASIC26.74■■□□□ 1.87
SNX30Q5VWJ9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNX30Q5VWJ9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNX30Q5VWJ9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.73■■□□□ 1.87
SNX30Q5VWJ9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNX30Q5VWJ9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.71■■□□□ 1.87
SNX30Q5VWJ9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNX30Q5VWJ9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.71■■□□□ 1.87
SNX30Q5VWJ9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.71■■□□□ 1.87
SNX30Q5VWJ9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNX30Q5VWJ9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
SNX30Q5VWJ9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.7■■□□□ 1.86
SNX30Q5VWJ9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNX30Q5VWJ9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNX30Q5VWJ9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SNX30Q5VWJ9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
SNX30Q5VWJ9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
SNX30Q5VWJ9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.67■■□□□ 1.86
SNX30Q5VWJ9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNX30Q5VWJ9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.66■■□□□ 1.86
SNX30Q5VWJ9 AL139393.2-201ENST00000608721 2025 ntBASIC26.66■■□□□ 1.86
SNX30Q5VWJ9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNX30Q5VWJ9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNX30Q5VWJ9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNX30Q5VWJ9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
SNX30Q5VWJ9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.65■■□□□ 1.86
SNX30Q5VWJ9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.65■■□□□ 1.86
SNX30Q5VWJ9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNX30Q5VWJ9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SNX30Q5VWJ9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.64■■□□□ 1.86
SNX30Q5VWJ9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNX30Q5VWJ9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.63■■□□□ 1.85
SNX30Q5VWJ9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.63■■□□□ 1.85
SNX30Q5VWJ9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNX30Q5VWJ9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.63■■□□□ 1.85
SNX30Q5VWJ9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
SNX30Q5VWJ9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.62■■□□□ 1.85
SNX30Q5VWJ9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNX30Q5VWJ9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNX30Q5VWJ9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.61■■□□□ 1.85
SNX30Q5VWJ9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNX30Q5VWJ9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.61■■□□□ 1.85
SNX30Q5VWJ9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNX30Q5VWJ9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNX30Q5VWJ9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNX30Q5VWJ9 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNX30Q5VWJ9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNX30Q5VWJ9 HSD17B1P1-201ENST00000590052 955 ntBASIC26.6■■□□□ 1.85
SNX30Q5VWJ9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNX30Q5VWJ9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNX30Q5VWJ9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNX30Q5VWJ9 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.59■■□□□ 1.85
SNX30Q5VWJ9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SNX30Q5VWJ9 AC148477.6-201ENST00000623746 465 ntBASIC26.59■■□□□ 1.85
SNX30Q5VWJ9 AC100797.4-201ENST00000631653 1827 ntBASIC26.59■■□□□ 1.85
SNX30Q5VWJ9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.58■■□□□ 1.85
SNX30Q5VWJ9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.84
SNX30Q5VWJ9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SNX30Q5VWJ9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
SNX30Q5VWJ9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.57■■□□□ 1.84
SNX30Q5VWJ9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.57■■□□□ 1.84
SNX30Q5VWJ9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNX30Q5VWJ9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNX30Q5VWJ9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNX30Q5VWJ9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SNX30Q5VWJ9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
SNX30Q5VWJ9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.54■■□□□ 1.84
SNX30Q5VWJ9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SNX30Q5VWJ9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
SNX30Q5VWJ9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNX30Q5VWJ9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
SNX30Q5VWJ9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.52■■□□□ 1.84
SNX30Q5VWJ9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.52■■□□□ 1.84
SNX30Q5VWJ9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
SNX30Q5VWJ9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SNX30Q5VWJ9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
SNX30Q5VWJ9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SNX30Q5VWJ9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SNX30Q5VWJ9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.51■■□□□ 1.83
SNX30Q5VWJ9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
SNX30Q5VWJ9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNX30Q5VWJ9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNX30Q5VWJ9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNX30Q5VWJ9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNX30Q5VWJ9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNX30Q5VWJ9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.49■■□□□ 1.83
SNX30Q5VWJ9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.49■■□□□ 1.83
SNX30Q5VWJ9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms