Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SFTPBP07988 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SFTPBP07988 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SFTPBP07988 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SFTPBP07988 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SFTPBP07988 AC100797.4-201ENST00000631653 1827 ntBASIC21.78■■□□□ 1.08
SFTPBP07988 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.78■■□□□ 1.08
SFTPBP07988 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SFTPBP07988 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SFTPBP07988 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.77■■□□□ 1.08
SFTPBP07988 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SFTPBP07988 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.77■■□□□ 1.08
SFTPBP07988 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SFTPBP07988 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SFTPBP07988 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SFTPBP07988 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SFTPBP07988 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SFTPBP07988 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.76■■□□□ 1.07
SFTPBP07988 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SFTPBP07988 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.76■■□□□ 1.07
SFTPBP07988 ABHD17AP4-201ENST00000411545 909 ntBASIC21.75■■□□□ 1.07
SFTPBP07988 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.75■■□□□ 1.07
SFTPBP07988 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SFTPBP07988 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SFTPBP07988 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SFTPBP07988 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SFTPBP07988 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SFTPBP07988 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SFTPBP07988 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SFTPBP07988 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SFTPBP07988 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SFTPBP07988 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SFTPBP07988 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.73■■□□□ 1.07
SFTPBP07988 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SFTPBP07988 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SFTPBP07988 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SFTPBP07988 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SFTPBP07988 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SFTPBP07988 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SFTPBP07988 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SFTPBP07988 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.72■■□□□ 1.07
SFTPBP07988 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.72■■□□□ 1.07
SFTPBP07988 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.72■■□□□ 1.07
SFTPBP07988 MIR6090-201ENST00000622481 60 ntBASIC21.72■■□□□ 1.07
SFTPBP07988 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SFTPBP07988 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SFTPBP07988 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SFTPBP07988 AC108673.1-201ENST00000510422 1159 ntBASIC21.71■■□□□ 1.07
SFTPBP07988 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SFTPBP07988 BX255925.1-201ENST00000566954 1854 ntBASIC21.71■■□□□ 1.07
SFTPBP07988 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SFTPBP07988 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SFTPBP07988 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SFTPBP07988 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SFTPBP07988 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SFTPBP07988 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SFTPBP07988 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SFTPBP07988 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.69■■□□□ 1.06
SFTPBP07988 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SFTPBP07988 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SFTPBP07988 AL121749.1-202ENST00000609313 2153 ntBASIC21.68■■□□□ 1.06
SFTPBP07988 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.68■■□□□ 1.06
SFTPBP07988 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SFTPBP07988 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SFTPBP07988 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SFTPBP07988 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SFTPBP07988 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SFTPBP07988 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.67■■□□□ 1.06
SFTPBP07988 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SFTPBP07988 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SFTPBP07988 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SFTPBP07988 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SFTPBP07988 DUX4L29-201ENST00000425409 679 ntBASIC21.66■■□□□ 1.06
SFTPBP07988 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.66■■□□□ 1.06
SFTPBP07988 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SFTPBP07988 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SFTPBP07988 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SFTPBP07988 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SFTPBP07988 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.65■■□□□ 1.06
SFTPBP07988 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SFTPBP07988 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.65■■□□□ 1.06
SFTPBP07988 MIR7108-201ENST00000614319 87 ntBASIC21.65■■□□□ 1.06
SFTPBP07988 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SFTPBP07988 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SFTPBP07988 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SFTPBP07988 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SFTPBP07988 LINC01003-201ENST00000564834 1764 ntBASIC21.64■■□□□ 1.06
SFTPBP07988 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.64■■□□□ 1.06
SFTPBP07988 AC135983.2-203ENST00000454486 1613 ntBASIC21.64■■□□□ 1.05
SFTPBP07988 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
SFTPBP07988 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.64■■□□□ 1.05
SFTPBP07988 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SFTPBP07988 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SFTPBP07988 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SFTPBP07988 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SFTPBP07988 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SFTPBP07988 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.63■■□□□ 1.05
SFTPBP07988 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.63■■□□□ 1.05
SFTPBP07988 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.63■■□□□ 1.05
SFTPBP07988 AC021231.2-201ENST00000594613 730 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms