Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC148477.6-201ENST00000623746 465 ntBASIC30.29■■■□□ 2.44
HLA-DOAP06340 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
HLA-DOAP06340 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.29■■■□□ 2.44
HLA-DOAP06340 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.29■■■□□ 2.44
HLA-DOAP06340 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
HLA-DOAP06340 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
HLA-DOAP06340 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.28■■■□□ 2.44
HLA-DOAP06340 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.28■■■□□ 2.44
HLA-DOAP06340 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.28■■■□□ 2.44
HLA-DOAP06340 AC022413.1-201ENST00000624602 984 ntBASIC30.27■■■□□ 2.44
HLA-DOAP06340 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
HLA-DOAP06340 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
HLA-DOAP06340 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.26■■■□□ 2.43
HLA-DOAP06340 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
HLA-DOAP06340 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
HLA-DOAP06340 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
HLA-DOAP06340 RNF126P1-201ENST00000567452 1320 ntBASIC30.24■■■□□ 2.43
HLA-DOAP06340 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
HLA-DOAP06340 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
HLA-DOAP06340 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.23■■■□□ 2.43
HLA-DOAP06340 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
HLA-DOAP06340 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
HLA-DOAP06340 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
HLA-DOAP06340 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.21■■■□□ 2.43
HLA-DOAP06340 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
HLA-DOAP06340 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
HLA-DOAP06340 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
HLA-DOAP06340 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
HLA-DOAP06340 MIR219A2-201ENST00000608502 1504 ntBASIC30.19■■■□□ 2.42
HLA-DOAP06340 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
HLA-DOAP06340 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
HLA-DOAP06340 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.18■■■□□ 2.42
HLA-DOAP06340 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.18■■■□□ 2.42
HLA-DOAP06340 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
HLA-DOAP06340 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
HLA-DOAP06340 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.17■■■□□ 2.42
HLA-DOAP06340 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.16■■■□□ 2.42
HLA-DOAP06340 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
HLA-DOAP06340 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
HLA-DOAP06340 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.15■■■□□ 2.42
HLA-DOAP06340 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
HLA-DOAP06340 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
HLA-DOAP06340 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
HLA-DOAP06340 ABHD17AP5-201ENST00000580133 923 ntBASIC30.14■■■□□ 2.42
HLA-DOAP06340 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
HLA-DOAP06340 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
HLA-DOAP06340 AC100797.4-201ENST00000631653 1827 ntBASIC30.12■■■□□ 2.41
HLA-DOAP06340 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
HLA-DOAP06340 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.12■■■□□ 2.41
HLA-DOAP06340 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
HLA-DOAP06340 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
HLA-DOAP06340 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
HLA-DOAP06340 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.11■■■□□ 2.41
HLA-DOAP06340 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
HLA-DOAP06340 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
HLA-DOAP06340 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
HLA-DOAP06340 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
HLA-DOAP06340 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
HLA-DOAP06340 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
HLA-DOAP06340 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
HLA-DOAP06340 AC060814.1-201ENST00000554326 538 ntBASIC30.08■■■□□ 2.41
HLA-DOAP06340 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.07■■■□□ 2.4
HLA-DOAP06340 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
HLA-DOAP06340 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.07■■■□□ 2.4
HLA-DOAP06340 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.07■■■□□ 2.4
HLA-DOAP06340 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.05■■■□□ 2.4
HLA-DOAP06340 AL139393.2-201ENST00000608721 2025 ntBASIC30.05■■■□□ 2.4
HLA-DOAP06340 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.04■■■□□ 2.4
HLA-DOAP06340 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.04■■■□□ 2.4
HLA-DOAP06340 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HLA-DOAP06340 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
HLA-DOAP06340 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
HLA-DOAP06340 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
HLA-DOAP06340 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
HLA-DOAP06340 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.02■■■□□ 2.4
HLA-DOAP06340 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
HLA-DOAP06340 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
HLA-DOAP06340 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.01■■■□□ 2.39
HLA-DOAP06340 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
HLA-DOAP06340 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC30■■■□□ 2.39
HLA-DOAP06340 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
HLA-DOAP06340 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30■■■□□ 2.39
HLA-DOAP06340 AC126177.7-201ENST00000547904 679 ntBASIC30■■■□□ 2.39
HLA-DOAP06340 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30■■■□□ 2.39
HLA-DOAP06340 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
HLA-DOAP06340 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30■■■□□ 2.39
HLA-DOAP06340 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.99■■■□□ 2.39
HLA-DOAP06340 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.99■■■□□ 2.39
HLA-DOAP06340 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
HLA-DOAP06340 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
HLA-DOAP06340 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
HLA-DOAP06340 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HLA-DOAP06340 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
HLA-DOAP06340 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HLA-DOAP06340 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
HLA-DOAP06340 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
HLA-DOAP06340 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
HLA-DOAP06340 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
HLA-DOAP06340 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
HLA-DOAP06340 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms