Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PPM1DO15297 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PPM1DO15297 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PPM1DO15297 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PPM1DO15297 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PPM1DO15297 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.86■■□□□ 1.57
PPM1DO15297 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PPM1DO15297 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.85■■□□□ 1.57
PPM1DO15297 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PPM1DO15297 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
PPM1DO15297 AC008813.1-201ENST00000536597 885 ntBASIC24.85■■□□□ 1.57
PPM1DO15297 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.85■■□□□ 1.57
PPM1DO15297 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.85■■□□□ 1.57
PPM1DO15297 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
PPM1DO15297 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PPM1DO15297 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PPM1DO15297 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PPM1DO15297 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PPM1DO15297 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PPM1DO15297 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PPM1DO15297 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.83■■□□□ 1.57
PPM1DO15297 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PPM1DO15297 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.83■■□□□ 1.57
PPM1DO15297 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
PPM1DO15297 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PPM1DO15297 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.83■■□□□ 1.57
PPM1DO15297 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PPM1DO15297 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PPM1DO15297 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
PPM1DO15297 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.82■■□□□ 1.56
PPM1DO15297 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.82■■□□□ 1.56
PPM1DO15297 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PPM1DO15297 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
PPM1DO15297 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PPM1DO15297 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PPM1DO15297 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
PPM1DO15297 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PPM1DO15297 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PPM1DO15297 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PPM1DO15297 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPM1DO15297 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.79■■□□□ 1.56
PPM1DO15297 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPM1DO15297 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPM1DO15297 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPM1DO15297 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
PPM1DO15297 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPM1DO15297 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PPM1DO15297 GPX1-201ENST00000419349 1106 ntBASIC24.77■■□□□ 1.56
PPM1DO15297 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.77■■□□□ 1.56
PPM1DO15297 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.77■■□□□ 1.56
PPM1DO15297 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPM1DO15297 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.77■■□□□ 1.56
PPM1DO15297 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
PPM1DO15297 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPM1DO15297 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PPM1DO15297 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.76■■□□□ 1.55
PPM1DO15297 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
PPM1DO15297 AL139393.2-201ENST00000608721 2025 ntBASIC24.76■■□□□ 1.55
PPM1DO15297 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.76■■□□□ 1.55
PPM1DO15297 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPM1DO15297 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
PPM1DO15297 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.74■■□□□ 1.55
PPM1DO15297 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.74■■□□□ 1.55
PPM1DO15297 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PPM1DO15297 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPM1DO15297 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PPM1DO15297 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.73■■□□□ 1.55
PPM1DO15297 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
PPM1DO15297 AP004833.2-201ENST00000532228 1454 ntBASIC24.73■■□□□ 1.55
PPM1DO15297 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.73■■□□□ 1.55
PPM1DO15297 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.73■■□□□ 1.55
PPM1DO15297 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPM1DO15297 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PPM1DO15297 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.72■■□□□ 1.55
PPM1DO15297 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PPM1DO15297 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PPM1DO15297 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
PPM1DO15297 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
PPM1DO15297 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.71■■□□□ 1.55
PPM1DO15297 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.71■■□□□ 1.55
PPM1DO15297 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PPM1DO15297 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.71■■□□□ 1.55
PPM1DO15297 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PPM1DO15297 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PPM1DO15297 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PPM1DO15297 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
PPM1DO15297 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PPM1DO15297 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PPM1DO15297 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.7■■□□□ 1.54
PPM1DO15297 AC148477.6-201ENST00000623746 465 ntBASIC24.7■■□□□ 1.54
PPM1DO15297 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PPM1DO15297 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPM1DO15297 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.69■■□□□ 1.54
PPM1DO15297 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
PPM1DO15297 AC022413.1-201ENST00000624602 984 ntBASIC24.69■■□□□ 1.54
PPM1DO15297 AC100797.4-201ENST00000631653 1827 ntBASIC24.68■■□□□ 1.54
PPM1DO15297 RARRES2P2-201ENST00000394842 485 ntBASIC24.68■■□□□ 1.54
PPM1DO15297 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PPM1DO15297 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PPM1DO15297 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms