Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TBC1D3DA0A087WVF3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.49■■□□□ 1.67
TBC1D3DA0A087WVF3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.49■■□□□ 1.67
TBC1D3DA0A087WVF3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
TBC1D3DA0A087WVF3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TBC1D3DA0A087WVF3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.49■■□□□ 1.67
TBC1D3DA0A087WVF3 RNF126P1-201ENST00000567452 1320 ntBASIC25.49■■□□□ 1.67
TBC1D3DA0A087WVF3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TBC1D3DA0A087WVF3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TBC1D3DA0A087WVF3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TBC1D3DA0A087WVF3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TBC1D3DA0A087WVF3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.48■■□□□ 1.67
TBC1D3DA0A087WVF3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
TBC1D3DA0A087WVF3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TBC1D3DA0A087WVF3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
TBC1D3DA0A087WVF3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.47■■□□□ 1.67
TBC1D3DA0A087WVF3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.46■■□□□ 1.67
TBC1D3DA0A087WVF3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.46■■□□□ 1.67
TBC1D3DA0A087WVF3 AC148477.6-201ENST00000623746 465 ntBASIC25.46■■□□□ 1.67
TBC1D3DA0A087WVF3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TBC1D3DA0A087WVF3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
TBC1D3DA0A087WVF3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TBC1D3DA0A087WVF3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
TBC1D3DA0A087WVF3 AP004833.2-201ENST00000532228 1454 ntBASIC25.43■■□□□ 1.66
TBC1D3DA0A087WVF3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.43■■□□□ 1.66
TBC1D3DA0A087WVF3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TBC1D3DA0A087WVF3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TBC1D3DA0A087WVF3 MIR219A2-201ENST00000608502 1504 ntBASIC25.42■■□□□ 1.66
TBC1D3DA0A087WVF3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.41■■□□□ 1.66
TBC1D3DA0A087WVF3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
TBC1D3DA0A087WVF3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.41■■□□□ 1.66
TBC1D3DA0A087WVF3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TBC1D3DA0A087WVF3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TBC1D3DA0A087WVF3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
TBC1D3DA0A087WVF3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.4■■□□□ 1.66
TBC1D3DA0A087WVF3 ABHD17AP5-201ENST00000580133 923 ntBASIC25.4■■□□□ 1.66
TBC1D3DA0A087WVF3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TBC1D3DA0A087WVF3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
TBC1D3DA0A087WVF3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TBC1D3DA0A087WVF3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.39■■□□□ 1.66
TBC1D3DA0A087WVF3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TBC1D3DA0A087WVF3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TBC1D3DA0A087WVF3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TBC1D3DA0A087WVF3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TBC1D3DA0A087WVF3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
TBC1D3DA0A087WVF3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TBC1D3DA0A087WVF3 AC100797.4-201ENST00000631653 1827 ntBASIC25.37■■□□□ 1.65
TBC1D3DA0A087WVF3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
TBC1D3DA0A087WVF3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TBC1D3DA0A087WVF3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
TBC1D3DA0A087WVF3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TBC1D3DA0A087WVF3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
TBC1D3DA0A087WVF3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TBC1D3DA0A087WVF3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TBC1D3DA0A087WVF3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TBC1D3DA0A087WVF3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TBC1D3DA0A087WVF3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.33■■□□□ 1.65
TBC1D3DA0A087WVF3 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TBC1D3DA0A087WVF3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TBC1D3DA0A087WVF3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
TBC1D3DA0A087WVF3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
TBC1D3DA0A087WVF3 AC060814.1-201ENST00000554326 538 ntBASIC25.32■■□□□ 1.64
TBC1D3DA0A087WVF3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.32■■□□□ 1.64
TBC1D3DA0A087WVF3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TBC1D3DA0A087WVF3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
TBC1D3DA0A087WVF3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
TBC1D3DA0A087WVF3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.31■■□□□ 1.64
TBC1D3DA0A087WVF3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.31■■□□□ 1.64
TBC1D3DA0A087WVF3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.31■■□□□ 1.64
TBC1D3DA0A087WVF3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TBC1D3DA0A087WVF3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TBC1D3DA0A087WVF3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
TBC1D3DA0A087WVF3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
TBC1D3DA0A087WVF3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TBC1D3DA0A087WVF3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.28■■□□□ 1.64
TBC1D3DA0A087WVF3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.28■■□□□ 1.64
TBC1D3DA0A087WVF3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TBC1D3DA0A087WVF3 AL139393.2-201ENST00000608721 2025 ntBASIC25.27■■□□□ 1.64
TBC1D3DA0A087WVF3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TBC1D3DA0A087WVF3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TBC1D3DA0A087WVF3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
TBC1D3DA0A087WVF3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TBC1D3DA0A087WVF3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TBC1D3DA0A087WVF3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.26■■□□□ 1.63
TBC1D3DA0A087WVF3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TBC1D3DA0A087WVF3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TBC1D3DA0A087WVF3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.24■■□□□ 1.63
TBC1D3DA0A087WVF3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
TBC1D3DA0A087WVF3 AC126177.7-201ENST00000547904 679 ntBASIC25.24■■□□□ 1.63
TBC1D3DA0A087WVF3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.24■■□□□ 1.63
TBC1D3DA0A087WVF3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
TBC1D3DA0A087WVF3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
TBC1D3DA0A087WVF3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
TBC1D3DA0A087WVF3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.22■■□□□ 1.63
TBC1D3DA0A087WVF3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.21■■□□□ 1.63
TBC1D3DA0A087WVF3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TBC1D3DA0A087WVF3 ABCB10P3-201ENST00000561950 2166 ntBASIC25.21■■□□□ 1.63
TBC1D3DA0A087WVF3 ABCB10P1-201ENST00000614297 2181 ntBASIC25.21■■□□□ 1.63
TBC1D3DA0A087WVF3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TBC1D3DA0A087WVF3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms