Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
NPAP1Q9NZP6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
NPAP1Q9NZP6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
NPAP1Q9NZP6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPAP1Q9NZP6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.1■■□□□ 1.29
NPAP1Q9NZP6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPAP1Q9NZP6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPAP1Q9NZP6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
NPAP1Q9NZP6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPAP1Q9NZP6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPAP1Q9NZP6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.09■■□□□ 1.29
NPAP1Q9NZP6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPAP1Q9NZP6 MIR6090-201ENST00000622481 60 ntBASIC23.09■■□□□ 1.29
NPAP1Q9NZP6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPAP1Q9NZP6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPAP1Q9NZP6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.08■■□□□ 1.29
NPAP1Q9NZP6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.08■■□□□ 1.29
NPAP1Q9NZP6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.08■■□□□ 1.28
NPAP1Q9NZP6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
NPAP1Q9NZP6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NPAP1Q9NZP6 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
NPAP1Q9NZP6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NPAP1Q9NZP6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
NPAP1Q9NZP6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.06■■□□□ 1.28
NPAP1Q9NZP6 AC108673.1-201ENST00000510422 1159 ntBASIC23.06■■□□□ 1.28
NPAP1Q9NZP6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.06■■□□□ 1.28
NPAP1Q9NZP6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NPAP1Q9NZP6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NPAP1Q9NZP6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NPAP1Q9NZP6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
NPAP1Q9NZP6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPAP1Q9NZP6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPAP1Q9NZP6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPAP1Q9NZP6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPAP1Q9NZP6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.05■■□□□ 1.28
NPAP1Q9NZP6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.04■■□□□ 1.28
NPAP1Q9NZP6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
NPAP1Q9NZP6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
NPAP1Q9NZP6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NPAP1Q9NZP6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.04■■□□□ 1.28
NPAP1Q9NZP6 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NPAP1Q9NZP6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NPAP1Q9NZP6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.03■■□□□ 1.28
NPAP1Q9NZP6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPAP1Q9NZP6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPAP1Q9NZP6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.03■■□□□ 1.28
NPAP1Q9NZP6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPAP1Q9NZP6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
NPAP1Q9NZP6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPAP1Q9NZP6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.02■■□□□ 1.28
NPAP1Q9NZP6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.02■■□□□ 1.28
NPAP1Q9NZP6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.02■■□□□ 1.28
NPAP1Q9NZP6 MIR7108-201ENST00000614319 87 ntBASIC23.02■■□□□ 1.28
NPAP1Q9NZP6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
NPAP1Q9NZP6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPAP1Q9NZP6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPAP1Q9NZP6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPAP1Q9NZP6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPAP1Q9NZP6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NPAP1Q9NZP6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPAP1Q9NZP6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPAP1Q9NZP6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
NPAP1Q9NZP6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
NPAP1Q9NZP6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23■■□□□ 1.27
NPAP1Q9NZP6 DUX4L29-201ENST00000425409 679 ntBASIC23■■□□□ 1.27
NPAP1Q9NZP6 AC021231.2-201ENST00000594613 730 ntBASIC23■■□□□ 1.27
NPAP1Q9NZP6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23■■□□□ 1.27
NPAP1Q9NZP6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPAP1Q9NZP6 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPAP1Q9NZP6 ZNRF2P2-203ENST00000454624 420 ntBASIC22.99■■□□□ 1.27
NPAP1Q9NZP6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.99■■□□□ 1.27
NPAP1Q9NZP6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPAP1Q9NZP6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPAP1Q9NZP6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPAP1Q9NZP6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPAP1Q9NZP6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NPAP1Q9NZP6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPAP1Q9NZP6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.98■■□□□ 1.27
NPAP1Q9NZP6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
NPAP1Q9NZP6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPAP1Q9NZP6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NPAP1Q9NZP6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPAP1Q9NZP6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
NPAP1Q9NZP6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.96■■□□□ 1.27
NPAP1Q9NZP6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NPAP1Q9NZP6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NPAP1Q9NZP6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
NPAP1Q9NZP6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
NPAP1Q9NZP6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPAP1Q9NZP6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.94■■□□□ 1.26
NPAP1Q9NZP6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPAP1Q9NZP6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.94■■□□□ 1.26
NPAP1Q9NZP6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.94■■□□□ 1.26
NPAP1Q9NZP6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
NPAP1Q9NZP6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.93■■□□□ 1.26
NPAP1Q9NZP6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NPAP1Q9NZP6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
NPAP1Q9NZP6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
NPAP1Q9NZP6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.93■■□□□ 1.26
NPAP1Q9NZP6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms