Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.16■■■□□ 2.26
RETREG2Q8NC44 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
RETREG2Q8NC44 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.15■■■□□ 2.26
RETREG2Q8NC44 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
RETREG2Q8NC44 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.14■■■□□ 2.26
RETREG2Q8NC44 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.25
RETREG2Q8NC44 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.13■■■□□ 2.25
RETREG2Q8NC44 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
RETREG2Q8NC44 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.12■■■□□ 2.25
RETREG2Q8NC44 AC010864.1-201ENST00000609407 1511 ntBASIC29.12■■■□□ 2.25
RETREG2Q8NC44 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RETREG2Q8NC44 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.11■■■□□ 2.25
RETREG2Q8NC44 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.11■■■□□ 2.25
RETREG2Q8NC44 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RETREG2Q8NC44 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
RETREG2Q8NC44 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RETREG2Q8NC44 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.1■■■□□ 2.25
RETREG2Q8NC44 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
RETREG2Q8NC44 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
RETREG2Q8NC44 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.07■■■□□ 2.24
RETREG2Q8NC44 AC139426.1-201ENST00000568218 2529 ntBASIC29.07■■■□□ 2.24
RETREG2Q8NC44 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.06■■■□□ 2.24
RETREG2Q8NC44 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
RETREG2Q8NC44 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.06■■■□□ 2.24
RETREG2Q8NC44 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.05■■■□□ 2.24
RETREG2Q8NC44 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
RETREG2Q8NC44 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
RETREG2Q8NC44 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RETREG2Q8NC44 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RETREG2Q8NC44 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RETREG2Q8NC44 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
RETREG2Q8NC44 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RETREG2Q8NC44 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.03■■■□□ 2.24
RETREG2Q8NC44 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.24
RETREG2Q8NC44 AL135925.1-201ENST00000605920 1701 ntBASIC29.01■■■□□ 2.23
RETREG2Q8NC44 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
RETREG2Q8NC44 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29■■■□□ 2.23
RETREG2Q8NC44 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29■■■□□ 2.23
RETREG2Q8NC44 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29■■■□□ 2.23
RETREG2Q8NC44 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29■■■□□ 2.23
RETREG2Q8NC44 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29■■■□□ 2.23
RETREG2Q8NC44 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29■■■□□ 2.23
RETREG2Q8NC44 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29■■■□□ 2.23
RETREG2Q8NC44 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
RETREG2Q8NC44 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
RETREG2Q8NC44 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
RETREG2Q8NC44 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RETREG2Q8NC44 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
RETREG2Q8NC44 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
RETREG2Q8NC44 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
RETREG2Q8NC44 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
RETREG2Q8NC44 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
RETREG2Q8NC44 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.97■■■□□ 2.23
RETREG2Q8NC44 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
RETREG2Q8NC44 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.96■■■□□ 2.23
RETREG2Q8NC44 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
RETREG2Q8NC44 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.95■■■□□ 2.22
RETREG2Q8NC44 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.95■■■□□ 2.22
RETREG2Q8NC44 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.95■■■□□ 2.22
RETREG2Q8NC44 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.95■■■□□ 2.22
RETREG2Q8NC44 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
RETREG2Q8NC44 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
RETREG2Q8NC44 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.94■■■□□ 2.22
RETREG2Q8NC44 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RETREG2Q8NC44 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RETREG2Q8NC44 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
RETREG2Q8NC44 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RETREG2Q8NC44 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.92■■■□□ 2.22
RETREG2Q8NC44 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.92■■■□□ 2.22
RETREG2Q8NC44 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.92■■■□□ 2.22
RETREG2Q8NC44 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RETREG2Q8NC44 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RETREG2Q8NC44 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RETREG2Q8NC44 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
RETREG2Q8NC44 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RETREG2Q8NC44 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.9■■■□□ 2.22
RETREG2Q8NC44 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.9■■■□□ 2.22
RETREG2Q8NC44 RARRES2P2-201ENST00000394842 485 ntBASIC28.89■■■□□ 2.22
RETREG2Q8NC44 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.89■■■□□ 2.21
RETREG2Q8NC44 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RETREG2Q8NC44 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.88■■■□□ 2.21
RETREG2Q8NC44 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RETREG2Q8NC44 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RETREG2Q8NC44 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RETREG2Q8NC44 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.87■■■□□ 2.21
RETREG2Q8NC44 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RETREG2Q8NC44 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.87■■■□□ 2.21
RETREG2Q8NC44 LINC00273-201ENST00000539813 1452 ntBASIC28.86■■■□□ 2.21
RETREG2Q8NC44 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.86■■■□□ 2.21
RETREG2Q8NC44 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RETREG2Q8NC44 GPX1-201ENST00000419349 1106 ntBASIC28.85■■■□□ 2.21
RETREG2Q8NC44 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.84■■■□□ 2.21
RETREG2Q8NC44 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RETREG2Q8NC44 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
RETREG2Q8NC44 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.83■■■□□ 2.21
RETREG2Q8NC44 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RETREG2Q8NC44 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.83■■■□□ 2.21
RETREG2Q8NC44 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RETREG2Q8NC44 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
RETREG2Q8NC44 ABHD17AP5-201ENST00000580133 923 ntBASIC28.82■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms