Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.88■■■□□ 2.37
PRPF38AQ8NAV1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
PRPF38AQ8NAV1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PRPF38AQ8NAV1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PRPF38AQ8NAV1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
PRPF38AQ8NAV1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.87■■■□□ 2.37
PRPF38AQ8NAV1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PRPF38AQ8NAV1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.87■■■□□ 2.37
PRPF38AQ8NAV1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PRPF38AQ8NAV1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.86■■■□□ 2.37
PRPF38AQ8NAV1 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
PRPF38AQ8NAV1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.85■■■□□ 2.37
PRPF38AQ8NAV1 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
PRPF38AQ8NAV1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PRPF38AQ8NAV1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.84■■■□□ 2.37
PRPF38AQ8NAV1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
PRPF38AQ8NAV1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.84■■■□□ 2.37
PRPF38AQ8NAV1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PRPF38AQ8NAV1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.83■■■□□ 2.37
PRPF38AQ8NAV1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
PRPF38AQ8NAV1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
PRPF38AQ8NAV1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
PRPF38AQ8NAV1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
PRPF38AQ8NAV1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PRPF38AQ8NAV1 AC008813.1-201ENST00000536597 885 ntBASIC29.79■■■□□ 2.36
PRPF38AQ8NAV1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.79■■■□□ 2.36
PRPF38AQ8NAV1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.79■■■□□ 2.36
PRPF38AQ8NAV1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
PRPF38AQ8NAV1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
PRPF38AQ8NAV1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
PRPF38AQ8NAV1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PRPF38AQ8NAV1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.78■■■□□ 2.36
PRPF38AQ8NAV1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PRPF38AQ8NAV1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
PRPF38AQ8NAV1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PRPF38AQ8NAV1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.77■■■□□ 2.36
PRPF38AQ8NAV1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
PRPF38AQ8NAV1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.75■■■□□ 2.35
PRPF38AQ8NAV1 ST7-AS1-201ENST00000456775 1889 ntBASIC29.75■■■□□ 2.35
PRPF38AQ8NAV1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.75■■■□□ 2.35
PRPF38AQ8NAV1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.74■■■□□ 2.35
PRPF38AQ8NAV1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
PRPF38AQ8NAV1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PRPF38AQ8NAV1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
PRPF38AQ8NAV1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.73■■■□□ 2.35
PRPF38AQ8NAV1 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PRPF38AQ8NAV1 AC110285.7-201ENST00000624417 1536 ntBASIC29.73■■■□□ 2.35
PRPF38AQ8NAV1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PRPF38AQ8NAV1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PRPF38AQ8NAV1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PRPF38AQ8NAV1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PRPF38AQ8NAV1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
PRPF38AQ8NAV1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
PRPF38AQ8NAV1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
PRPF38AQ8NAV1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.7■■■□□ 2.35
PRPF38AQ8NAV1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
PRPF38AQ8NAV1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
PRPF38AQ8NAV1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.69■■■□□ 2.34
PRPF38AQ8NAV1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
PRPF38AQ8NAV1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PRPF38AQ8NAV1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PRPF38AQ8NAV1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PRPF38AQ8NAV1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF38AQ8NAV1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF38AQ8NAV1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF38AQ8NAV1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF38AQ8NAV1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.68■■■□□ 2.34
PRPF38AQ8NAV1 GPX1-201ENST00000419349 1106 ntBASIC29.67■■■□□ 2.34
PRPF38AQ8NAV1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
PRPF38AQ8NAV1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PRPF38AQ8NAV1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PRPF38AQ8NAV1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.67■■■□□ 2.34
PRPF38AQ8NAV1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
PRPF38AQ8NAV1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PRPF38AQ8NAV1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.65■■■□□ 2.34
PRPF38AQ8NAV1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
PRPF38AQ8NAV1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PRPF38AQ8NAV1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.65■■■□□ 2.34
PRPF38AQ8NAV1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PRPF38AQ8NAV1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
PRPF38AQ8NAV1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PRPF38AQ8NAV1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.64■■■□□ 2.34
PRPF38AQ8NAV1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.63■■■□□ 2.33
PRPF38AQ8NAV1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.63■■■□□ 2.33
PRPF38AQ8NAV1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.63■■■□□ 2.33
PRPF38AQ8NAV1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.63■■■□□ 2.33
PRPF38AQ8NAV1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.63■■■□□ 2.33
PRPF38AQ8NAV1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PRPF38AQ8NAV1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PRPF38AQ8NAV1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
PRPF38AQ8NAV1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
PRPF38AQ8NAV1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PRPF38AQ8NAV1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PRPF38AQ8NAV1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.61■■■□□ 2.33
PRPF38AQ8NAV1 RARRES2P2-201ENST00000394842 485 ntBASIC29.6■■■□□ 2.33
PRPF38AQ8NAV1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.6■■■□□ 2.33
PRPF38AQ8NAV1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.6■■■□□ 2.33
PRPF38AQ8NAV1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PRPF38AQ8NAV1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.59■■■□□ 2.33
PRPF38AQ8NAV1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms