Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCUBE1Q8IWY4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.12■■□□□ 1.61
SCUBE1Q8IWY4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCUBE1Q8IWY4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SCUBE1Q8IWY4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCUBE1Q8IWY4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.11■■□□□ 1.61
SCUBE1Q8IWY4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCUBE1Q8IWY4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SCUBE1Q8IWY4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCUBE1Q8IWY4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.1■■□□□ 1.61
SCUBE1Q8IWY4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCUBE1Q8IWY4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCUBE1Q8IWY4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCUBE1Q8IWY4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCUBE1Q8IWY4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.09■■□□□ 1.61
SCUBE1Q8IWY4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCUBE1Q8IWY4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCUBE1Q8IWY4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCUBE1Q8IWY4 AL162393.1-201ENST00000437852 946 ntBASIC25.08■■□□□ 1.61
SCUBE1Q8IWY4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.08■■□□□ 1.61
SCUBE1Q8IWY4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCUBE1Q8IWY4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.07■■□□□ 1.6
SCUBE1Q8IWY4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SCUBE1Q8IWY4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SCUBE1Q8IWY4 AC005559.1-201ENST00000589661 871 ntBASIC25.07■■□□□ 1.6
SCUBE1Q8IWY4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.07■■□□□ 1.6
SCUBE1Q8IWY4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCUBE1Q8IWY4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SCUBE1Q8IWY4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.06■■□□□ 1.6
SCUBE1Q8IWY4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SCUBE1Q8IWY4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SCUBE1Q8IWY4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SCUBE1Q8IWY4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SCUBE1Q8IWY4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCUBE1Q8IWY4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.05■■□□□ 1.6
SCUBE1Q8IWY4 MIR3665-201ENST00000578708 105 ntBASIC25.05■■□□□ 1.6
SCUBE1Q8IWY4 DUX4L28-201ENST00000623687 678 ntBASIC25.05■■□□□ 1.6
SCUBE1Q8IWY4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.05■■□□□ 1.6
SCUBE1Q8IWY4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCUBE1Q8IWY4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SCUBE1Q8IWY4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SCUBE1Q8IWY4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SCUBE1Q8IWY4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
SCUBE1Q8IWY4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCUBE1Q8IWY4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.02■■□□□ 1.6
SCUBE1Q8IWY4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.02■■□□□ 1.6
SCUBE1Q8IWY4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SCUBE1Q8IWY4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.01■■□□□ 1.59
SCUBE1Q8IWY4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SCUBE1Q8IWY4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SCUBE1Q8IWY4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25■■□□□ 1.59
SCUBE1Q8IWY4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25■■□□□ 1.59
SCUBE1Q8IWY4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
SCUBE1Q8IWY4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCUBE1Q8IWY4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SCUBE1Q8IWY4 BX255925.1-201ENST00000566954 1854 ntBASIC24.98■■□□□ 1.59
SCUBE1Q8IWY4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCUBE1Q8IWY4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.97■■□□□ 1.59
SCUBE1Q8IWY4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCUBE1Q8IWY4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SCUBE1Q8IWY4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCUBE1Q8IWY4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
SCUBE1Q8IWY4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCUBE1Q8IWY4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SCUBE1Q8IWY4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SCUBE1Q8IWY4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
SCUBE1Q8IWY4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.95■■□□□ 1.58
SCUBE1Q8IWY4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
SCUBE1Q8IWY4 RPS2P35-201ENST00000443417 897 ntBASIC24.95■■□□□ 1.58
SCUBE1Q8IWY4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.95■■□□□ 1.58
SCUBE1Q8IWY4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SCUBE1Q8IWY4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SCUBE1Q8IWY4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SCUBE1Q8IWY4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.94■■□□□ 1.58
SCUBE1Q8IWY4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.94■■□□□ 1.58
SCUBE1Q8IWY4 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SCUBE1Q8IWY4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
SCUBE1Q8IWY4 AC087741.3-201ENST00000624270 1347 ntBASIC24.93■■□□□ 1.58
SCUBE1Q8IWY4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SCUBE1Q8IWY4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SCUBE1Q8IWY4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SCUBE1Q8IWY4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SCUBE1Q8IWY4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
SCUBE1Q8IWY4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SCUBE1Q8IWY4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.92■■□□□ 1.58
SCUBE1Q8IWY4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SCUBE1Q8IWY4 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.92■■□□□ 1.58
SCUBE1Q8IWY4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.92■■□□□ 1.58
SCUBE1Q8IWY4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SCUBE1Q8IWY4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SCUBE1Q8IWY4 AL449106.1-201ENST00000608517 1980 ntBASIC24.91■■□□□ 1.58
SCUBE1Q8IWY4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCUBE1Q8IWY4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
SCUBE1Q8IWY4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
SCUBE1Q8IWY4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
SCUBE1Q8IWY4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
SCUBE1Q8IWY4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
SCUBE1Q8IWY4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SCUBE1Q8IWY4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
SCUBE1Q8IWY4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms