Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
LYRM4Q9HD34 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LYRM4Q9HD34 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
LYRM4Q9HD34 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LYRM4Q9HD34 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
LYRM4Q9HD34 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LYRM4Q9HD34 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.52■■□□□ 1.52
LYRM4Q9HD34 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
LYRM4Q9HD34 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LYRM4Q9HD34 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.51■■□□□ 1.51
LYRM4Q9HD34 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
LYRM4Q9HD34 ABCB10P3-201ENST00000561950 2166 ntBASIC24.51■■□□□ 1.51
LYRM4Q9HD34 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LYRM4Q9HD34 AL139393.2-201ENST00000608721 2025 ntBASIC24.5■■□□□ 1.51
LYRM4Q9HD34 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LYRM4Q9HD34 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
LYRM4Q9HD34 DUX4L29-201ENST00000425409 679 ntBASIC24.48■■□□□ 1.51
LYRM4Q9HD34 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LYRM4Q9HD34 AP004833.2-201ENST00000532228 1454 ntBASIC24.47■■□□□ 1.51
LYRM4Q9HD34 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LYRM4Q9HD34 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.46■■□□□ 1.51
LYRM4Q9HD34 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
LYRM4Q9HD34 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
LYRM4Q9HD34 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
LYRM4Q9HD34 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LYRM4Q9HD34 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LYRM4Q9HD34 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
LYRM4Q9HD34 AC021231.2-201ENST00000594613 730 ntBASIC24.45■■□□□ 1.5
LYRM4Q9HD34 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
LYRM4Q9HD34 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LYRM4Q9HD34 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LYRM4Q9HD34 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
LYRM4Q9HD34 LINC00273-201ENST00000539813 1452 ntBASIC24.44■■□□□ 1.5
LYRM4Q9HD34 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
LYRM4Q9HD34 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LYRM4Q9HD34 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LYRM4Q9HD34 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LYRM4Q9HD34 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.43■■□□□ 1.5
LYRM4Q9HD34 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LYRM4Q9HD34 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LYRM4Q9HD34 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.41■■□□□ 1.5
LYRM4Q9HD34 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.4■■□□□ 1.5
LYRM4Q9HD34 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
LYRM4Q9HD34 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.4■■□□□ 1.5
LYRM4Q9HD34 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.4■■□□□ 1.5
LYRM4Q9HD34 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.4■■□□□ 1.5
LYRM4Q9HD34 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.4■■□□□ 1.5
LYRM4Q9HD34 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.4■■□□□ 1.5
LYRM4Q9HD34 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LYRM4Q9HD34 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
LYRM4Q9HD34 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.39■■□□□ 1.49
LYRM4Q9HD34 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.39■■□□□ 1.49
LYRM4Q9HD34 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
LYRM4Q9HD34 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
LYRM4Q9HD34 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
LYRM4Q9HD34 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LYRM4Q9HD34 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.37■■□□□ 1.49
LYRM4Q9HD34 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LYRM4Q9HD34 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
LYRM4Q9HD34 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
LYRM4Q9HD34 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LYRM4Q9HD34 AC135983.2-203ENST00000454486 1613 ntBASIC24.36■■□□□ 1.49
LYRM4Q9HD34 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LYRM4Q9HD34 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.36■■□□□ 1.49
LYRM4Q9HD34 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.36■■□□□ 1.49
LYRM4Q9HD34 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.36■■□□□ 1.49
LYRM4Q9HD34 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.36■■□□□ 1.49
LYRM4Q9HD34 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LYRM4Q9HD34 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LYRM4Q9HD34 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
LYRM4Q9HD34 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.35■■□□□ 1.49
LYRM4Q9HD34 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LYRM4Q9HD34 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.34■■□□□ 1.49
LYRM4Q9HD34 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.34■■□□□ 1.49
LYRM4Q9HD34 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LYRM4Q9HD34 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.34■■□□□ 1.49
LYRM4Q9HD34 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LYRM4Q9HD34 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.34■■□□□ 1.49
LYRM4Q9HD34 AC139426.1-201ENST00000568218 2529 ntBASIC24.33■■□□□ 1.49
LYRM4Q9HD34 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
LYRM4Q9HD34 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LYRM4Q9HD34 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.33■■□□□ 1.48
LYRM4Q9HD34 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
LYRM4Q9HD34 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LYRM4Q9HD34 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LYRM4Q9HD34 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LYRM4Q9HD34 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LYRM4Q9HD34 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.31■■□□□ 1.48
LYRM4Q9HD34 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LYRM4Q9HD34 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LYRM4Q9HD34 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LYRM4Q9HD34 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LYRM4Q9HD34 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
LYRM4Q9HD34 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.31■■□□□ 1.48
LYRM4Q9HD34 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
LYRM4Q9HD34 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.3■■□□□ 1.48
LYRM4Q9HD34 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LYRM4Q9HD34 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.3■■□□□ 1.48
LYRM4Q9HD34 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LYRM4Q9HD34 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms