Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.18■■□□□ 1.78
ECHDC3Q96DC8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
ECHDC3Q96DC8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ECHDC3Q96DC8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.17■■□□□ 1.78
ECHDC3Q96DC8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.17■■□□□ 1.78
ECHDC3Q96DC8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ECHDC3Q96DC8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ECHDC3Q96DC8 ABCB10P1-201ENST00000614297 2181 ntBASIC26.16■■□□□ 1.78
ECHDC3Q96DC8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ECHDC3Q96DC8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ECHDC3Q96DC8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.15■■□□□ 1.78
ECHDC3Q96DC8 LINC00273-201ENST00000539813 1452 ntBASIC26.15■■□□□ 1.78
ECHDC3Q96DC8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
ECHDC3Q96DC8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ECHDC3Q96DC8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
ECHDC3Q96DC8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.13■■□□□ 1.77
ECHDC3Q96DC8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ECHDC3Q96DC8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.12■■□□□ 1.77
ECHDC3Q96DC8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ECHDC3Q96DC8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ECHDC3Q96DC8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.11■■□□□ 1.77
ECHDC3Q96DC8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.11■■□□□ 1.77
ECHDC3Q96DC8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
ECHDC3Q96DC8 MIR7108-201ENST00000614319 87 ntBASIC26.1■■□□□ 1.77
ECHDC3Q96DC8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
ECHDC3Q96DC8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ECHDC3Q96DC8 LINC01971-201ENST00000617888 1048 ntBASIC26.08■■□□□ 1.77
ECHDC3Q96DC8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.08■■□□□ 1.77
ECHDC3Q96DC8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ECHDC3Q96DC8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
ECHDC3Q96DC8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.07■■□□□ 1.76
ECHDC3Q96DC8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
ECHDC3Q96DC8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
ECHDC3Q96DC8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.07■■□□□ 1.76
ECHDC3Q96DC8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.06■■□□□ 1.76
ECHDC3Q96DC8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ECHDC3Q96DC8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ECHDC3Q96DC8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ECHDC3Q96DC8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
ECHDC3Q96DC8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
ECHDC3Q96DC8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.05■■□□□ 1.76
ECHDC3Q96DC8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
ECHDC3Q96DC8 AC135983.2-203ENST00000454486 1613 ntBASIC26.03■■□□□ 1.76
ECHDC3Q96DC8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
ECHDC3Q96DC8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ECHDC3Q96DC8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ECHDC3Q96DC8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ECHDC3Q96DC8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
ECHDC3Q96DC8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.02■■□□□ 1.76
ECHDC3Q96DC8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.02■■□□□ 1.76
ECHDC3Q96DC8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ECHDC3Q96DC8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.01■■□□□ 1.75
ECHDC3Q96DC8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.01■■□□□ 1.75
ECHDC3Q96DC8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
ECHDC3Q96DC8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
ECHDC3Q96DC8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26■■□□□ 1.75
ECHDC3Q96DC8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
ECHDC3Q96DC8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ECHDC3Q96DC8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ECHDC3Q96DC8 DUX4L11-201ENST00000611504 1267 ntBASIC25.99■■□□□ 1.75
ECHDC3Q96DC8 DUX4L12-201ENST00000614593 1267 ntBASIC25.99■■□□□ 1.75
ECHDC3Q96DC8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.99■■□□□ 1.75
ECHDC3Q96DC8 DUX4L14-201ENST00000621227 1267 ntBASIC25.99■■□□□ 1.75
ECHDC3Q96DC8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
ECHDC3Q96DC8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
ECHDC3Q96DC8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.98■■□□□ 1.75
ECHDC3Q96DC8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
ECHDC3Q96DC8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ECHDC3Q96DC8 WHAMMP2-203ENST00000563942 1603 ntBASIC25.97■■□□□ 1.75
ECHDC3Q96DC8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
ECHDC3Q96DC8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
ECHDC3Q96DC8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ECHDC3Q96DC8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.96■■□□□ 1.75
ECHDC3Q96DC8 AP004833.2-201ENST00000532228 1454 ntBASIC25.96■■□□□ 1.75
ECHDC3Q96DC8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
ECHDC3Q96DC8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
ECHDC3Q96DC8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ECHDC3Q96DC8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ECHDC3Q96DC8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
ECHDC3Q96DC8 AL139393.2-201ENST00000608721 2025 ntBASIC25.93■■□□□ 1.74
ECHDC3Q96DC8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.93■■□□□ 1.74
ECHDC3Q96DC8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.93■■□□□ 1.74
ECHDC3Q96DC8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
ECHDC3Q96DC8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.93■■□□□ 1.74
ECHDC3Q96DC8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.93■■□□□ 1.74
ECHDC3Q96DC8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ECHDC3Q96DC8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.92■■□□□ 1.74
ECHDC3Q96DC8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ECHDC3Q96DC8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
ECHDC3Q96DC8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
ECHDC3Q96DC8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 DUX4L13-201ENST00000554103 1267 ntBASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 DUX4L15-201ENST00000611059 1267 ntBASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 DUX4L23-201ENST00000615195 1269 ntBASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 DUX4L24-201ENST00000617576 1269 ntBASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 DUX4L22-201ENST00000618238 1269 ntBASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 DUX4L20-201ENST00000619712 1269 ntBASIC25.9■■□□□ 1.74
ECHDC3Q96DC8 DUX4L21-201ENST00000622058 1269 ntBASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms