Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALMS1Q8TCU4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALMS1Q8TCU4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALMS1Q8TCU4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.04■□□□□ 0.48
ALMS1Q8TCU4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALMS1Q8TCU4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.04■□□□□ 0.48
ALMS1Q8TCU4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALMS1Q8TCU4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALMS1Q8TCU4 RARRES2P1-201ENST00000474487 481 ntBASIC18.02■□□□□ 0.48
ALMS1Q8TCU4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.02■□□□□ 0.47
ALMS1Q8TCU4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ALMS1Q8TCU4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
ALMS1Q8TCU4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALMS1Q8TCU4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
ALMS1Q8TCU4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALMS1Q8TCU4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALMS1Q8TCU4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALMS1Q8TCU4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ALMS1Q8TCU4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18■□□□□ 0.47
ALMS1Q8TCU4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18■□□□□ 0.47
ALMS1Q8TCU4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ALMS1Q8TCU4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18■□□□□ 0.47
ALMS1Q8TCU4 TSPY13P-201ENST00000338964 914 ntBASIC17.99■□□□□ 0.47
ALMS1Q8TCU4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.98■□□□□ 0.47
ALMS1Q8TCU4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.98■□□□□ 0.47
ALMS1Q8TCU4 AL451085.2-201ENST00000605085 799 ntBASIC17.98■□□□□ 0.47
ALMS1Q8TCU4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ALMS1Q8TCU4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.98■□□□□ 0.47
ALMS1Q8TCU4 AC004987.1-201ENST00000428627 508 ntBASIC17.97■□□□□ 0.47
ALMS1Q8TCU4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.97■□□□□ 0.47
ALMS1Q8TCU4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALMS1Q8TCU4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.96■□□□□ 0.47
ALMS1Q8TCU4 AC022413.1-201ENST00000624602 984 ntBASIC17.96■□□□□ 0.47
ALMS1Q8TCU4 AL035685.1-201ENST00000636663 812 ntBASIC17.96■□□□□ 0.47
ALMS1Q8TCU4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALMS1Q8TCU4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.96■□□□□ 0.47
ALMS1Q8TCU4 AC060814.1-201ENST00000554326 538 ntBASIC17.96■□□□□ 0.47
ALMS1Q8TCU4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALMS1Q8TCU4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALMS1Q8TCU4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.96■□□□□ 0.47
ALMS1Q8TCU4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.95■□□□□ 0.46
ALMS1Q8TCU4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.95■□□□□ 0.46
ALMS1Q8TCU4 U85056.1-201ENST00000616429 682 ntBASIC17.95■□□□□ 0.46
ALMS1Q8TCU4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.95■□□□□ 0.46
ALMS1Q8TCU4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC17.95■□□□□ 0.46
ALMS1Q8TCU4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALMS1Q8TCU4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALMS1Q8TCU4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ALMS1Q8TCU4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ALMS1Q8TCU4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ALMS1Q8TCU4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALMS1Q8TCU4 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALMS1Q8TCU4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.92■□□□□ 0.46
ALMS1Q8TCU4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.91■□□□□ 0.46
ALMS1Q8TCU4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.91■□□□□ 0.46
ALMS1Q8TCU4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.91■□□□□ 0.46
ALMS1Q8TCU4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.91■□□□□ 0.46
ALMS1Q8TCU4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALMS1Q8TCU4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ALMS1Q8TCU4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ALMS1Q8TCU4 ATP5G2P3-201ENST00000429083 425 ntBASIC17.9■□□□□ 0.46
ALMS1Q8TCU4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.89■□□□□ 0.45
ALMS1Q8TCU4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ALMS1Q8TCU4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ALMS1Q8TCU4 KRT18P60-201ENST00000312876 1297 ntBASIC17.88■□□□□ 0.45
ALMS1Q8TCU4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ALMS1Q8TCU4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.87■□□□□ 0.45
ALMS1Q8TCU4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALMS1Q8TCU4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.87■□□□□ 0.45
ALMS1Q8TCU4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ALMS1Q8TCU4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
ALMS1Q8TCU4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALMS1Q8TCU4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ALMS1Q8TCU4 AL592295.1-201ENST00000400984 884 ntBASIC17.86■□□□□ 0.45
ALMS1Q8TCU4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.86■□□□□ 0.45
ALMS1Q8TCU4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALMS1Q8TCU4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ALMS1Q8TCU4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALMS1Q8TCU4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.85■□□□□ 0.45
ALMS1Q8TCU4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.85■□□□□ 0.45
ALMS1Q8TCU4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.85■□□□□ 0.45
ALMS1Q8TCU4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.85■□□□□ 0.45
ALMS1Q8TCU4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALMS1Q8TCU4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.84■□□□□ 0.45
ALMS1Q8TCU4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
ALMS1Q8TCU4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ALMS1Q8TCU4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC17.83■□□□□ 0.45
ALMS1Q8TCU4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.83■□□□□ 0.45
ALMS1Q8TCU4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ALMS1Q8TCU4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ALMS1Q8TCU4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.83■□□□□ 0.44
ALMS1Q8TCU4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC17.82■□□□□ 0.44
ALMS1Q8TCU4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALMS1Q8TCU4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALMS1Q8TCU4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.82■□□□□ 0.44
ALMS1Q8TCU4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALMS1Q8TCU4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
ALMS1Q8TCU4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.82■□□□□ 0.44
ALMS1Q8TCU4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALMS1Q8TCU4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms