Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
HPS6Q86YV9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
HPS6Q86YV9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HPS6Q86YV9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
HPS6Q86YV9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HPS6Q86YV9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.34■■□□□ 1.65
HPS6Q86YV9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
HPS6Q86YV9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HPS6Q86YV9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HPS6Q86YV9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HPS6Q86YV9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HPS6Q86YV9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
HPS6Q86YV9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.32■■□□□ 1.64
HPS6Q86YV9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.31■■□□□ 1.64
HPS6Q86YV9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HPS6Q86YV9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.3■■□□□ 1.64
HPS6Q86YV9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HPS6Q86YV9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
HPS6Q86YV9 AL121749.1-202ENST00000609313 2153 ntBASIC25.29■■□□□ 1.64
HPS6Q86YV9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HPS6Q86YV9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
HPS6Q86YV9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HPS6Q86YV9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.29■■□□□ 1.64
HPS6Q86YV9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
HPS6Q86YV9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
HPS6Q86YV9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HPS6Q86YV9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
HPS6Q86YV9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HPS6Q86YV9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HPS6Q86YV9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HPS6Q86YV9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HPS6Q86YV9 DRD5P2-201ENST00000421395 2012 ntBASIC25.25■■□□□ 1.63
HPS6Q86YV9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HPS6Q86YV9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
HPS6Q86YV9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
HPS6Q86YV9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HPS6Q86YV9 AL139393.2-201ENST00000608721 2025 ntBASIC25.22■■□□□ 1.63
HPS6Q86YV9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
HPS6Q86YV9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.22■■□□□ 1.63
HPS6Q86YV9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
HPS6Q86YV9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
HPS6Q86YV9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
HPS6Q86YV9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
HPS6Q86YV9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
HPS6Q86YV9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.21■■□□□ 1.63
HPS6Q86YV9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HPS6Q86YV9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
HPS6Q86YV9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HPS6Q86YV9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.19■■□□□ 1.62
HPS6Q86YV9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.19■■□□□ 1.62
HPS6Q86YV9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
HPS6Q86YV9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
HPS6Q86YV9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.18■■□□□ 1.62
HPS6Q86YV9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.18■■□□□ 1.62
HPS6Q86YV9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HPS6Q86YV9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
HPS6Q86YV9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HPS6Q86YV9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
HPS6Q86YV9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
HPS6Q86YV9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.17■■□□□ 1.62
HPS6Q86YV9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.17■■□□□ 1.62
HPS6Q86YV9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.17■■□□□ 1.62
HPS6Q86YV9 WASH5P-204ENST00000632292 975 ntBASIC25.17■■□□□ 1.62
HPS6Q86YV9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
HPS6Q86YV9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HPS6Q86YV9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HPS6Q86YV9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
HPS6Q86YV9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
HPS6Q86YV9 AC135731.1-201ENST00000569415 2548 ntBASIC25.16■■□□□ 1.62
HPS6Q86YV9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
HPS6Q86YV9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
HPS6Q86YV9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.15■■□□□ 1.62
HPS6Q86YV9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HPS6Q86YV9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
HPS6Q86YV9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HPS6Q86YV9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.13■■□□□ 1.61
HPS6Q86YV9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
HPS6Q86YV9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
HPS6Q86YV9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HPS6Q86YV9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HPS6Q86YV9 HLA-V-202ENST00000446817 847 ntBASIC25.13■■□□□ 1.61
HPS6Q86YV9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HPS6Q86YV9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
HPS6Q86YV9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
HPS6Q86YV9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HPS6Q86YV9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HPS6Q86YV9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
HPS6Q86YV9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.12■■□□□ 1.61
HPS6Q86YV9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HPS6Q86YV9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HPS6Q86YV9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.11■■□□□ 1.61
HPS6Q86YV9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HPS6Q86YV9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.1■■□□□ 1.61
HPS6Q86YV9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HPS6Q86YV9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.1■■□□□ 1.61
HPS6Q86YV9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HPS6Q86YV9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HPS6Q86YV9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
HPS6Q86YV9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.09■■□□□ 1.61
HPS6Q86YV9 ZNRF2P2-203ENST00000454624 420 ntBASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms